RNA–Protein interactions for RNA: ENST00000390990.1

RNU6-239P-201, Transcript of RNA, U6 small nuclear 239, pseudogene, humanhuman

BASIC

Gene RNU6-239P, Length 99 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-239P-201ENST00000390990 ARHGAP21Q5T5U3 1957 aa0.51□□□□□ -2.33
RNU6-239P-201ENST00000390990 TMEM154Q6P9G4 183 aa0.51□□□□□ -2.33
RNU6-239P-201ENST00000390990 PRSS55Q6UWB4 352 aaPredicted RBP0.51□□□□□ -2.33
RNU6-239P-201ENST00000390990 SCARA5Q6ZMJ2 495 aa0.51□□□□□ -2.33
RNU6-239P-201ENST00000390990 Q6ZVQ6 151 aa0.51□□□□□ -2.33
RNU6-239P-201ENST00000390990 ZNF677Q86XU0 584 aa0.51□□□□□ -2.33
RNU6-239P-201ENST00000390990 NME8Q8N427 588 aa0.51□□□□□ -2.33
RNU6-239P-201ENST00000390990 DEDD2Q8WXF8 326 aa0.51□□□□□ -2.33
RNU6-239P-201ENST00000390990 JAKMIP2Q96AA8 810 aa0.51□□□□□ -2.33
RNU6-239P-201ENST00000390990 MPP4Q96JB8 637 aa0.51□□□□□ -2.33
RNU6-239P-201ENST00000390990 LURAP1Q96LR2 239 aa0.51□□□□□ -2.33
RNU6-239P-201ENST00000390990 ANKRD27Q96NW4 1050 aa0.51□□□□□ -2.33
RNU6-239P-201ENST00000390990 NDNQ99608 321 aa0.51□□□□□ -2.33
RNU6-239P-201ENST00000390990 PRRG4Q9BZD6 226 aa0.51□□□□□ -2.33
RNU6-239P-201ENST00000390990 FNDC4Q9H6D8 234 aaPredicted RBP0.51□□□□□ -2.33
RNU6-239P-201ENST00000390990 ZNF446Q9NWS9 450 aa0.51□□□□□ -2.33
RNU6-239P-201ENST00000390990 PSG11Q9UQ72 335 aa0.51□□□□□ -2.33
RNU6-239P-201ENST00000390990 ASTN1O14525 1302 aa0.5□□□□□ -2.33
RNU6-239P-201ENST00000390990 A0A1W2PPQ1 181 aa0.5□□□□□ -2.33
RNU6-239P-201ENST00000390990 SNX3O60493 162 aa0.5□□□□□ -2.33
RNU6-239P-201ENST00000390990 STBD1O95210 358 aa0.5□□□□□ -2.33
RNU6-239P-201ENST00000390990 CD4P01730 458 aa0.5□□□□□ -2.33
RNU6-239P-201ENST00000390990 DLATP10515 647 aaKnown RBP0.5□□□□□ -2.33
RNU6-239P-201ENST00000390990 CD59P13987 128 aa0.5□□□□□ -2.33
RNU6-239P-201ENST00000390990 TBPP20226 339 aa0.5□□□□□ -2.33
RNU6-239P-201ENST00000390990 FUT3P21217 361 aa0.5□□□□□ -2.33
RNU6-239P-201ENST00000390990 DNASE1P24855 282 aa0.5□□□□□ -2.33
RNU6-239P-201ENST00000390990 PSMA4P25789 261 aaKnown RBP0.5□□□□□ -2.33
RNU6-239P-201ENST00000390990 RPL9P32969 192 aaKnown RBP0.5□□□□□ -2.33
RNU6-239P-201ENST00000390990 DUTP33316 252 aaKnown RBP0.5□□□□□ -2.33
RNU6-239P-201ENST00000390990 FEN1P39748 380 aaKnown RBP0.5□□□□□ -2.33
RNU6-239P-201ENST00000390990 MAGEA9P43362 315 aa0.5□□□□□ -2.33
RNU6-239P-201ENST00000390990 MFAP4P55083 255 aa0.5□□□□□ -2.33
RNU6-239P-201ENST00000390990 CDH13P55290 713 aa0.5□□□□□ -2.33
RNU6-239P-201ENST00000390990 PEX3P56589 373 aa0.5□□□□□ -2.33
RNU6-239P-201ENST00000390990 RPS27AP62979 156 aaKnown RBP0.5□□□□□ -2.33
RNU6-239P-201ENST00000390990 CREB5Q02930 508 aa0.5□□□□□ -2.33
RNU6-239P-201ENST00000390990 CRYMQ14894 314 aa0.5□□□□□ -2.33
RNU6-239P-201ENST00000390990 NONOQ15233 471 aaKnown RBP eCLIP0.5□□□□□ -2.33
RNU6-239P-201ENST00000390990 KRTAP6-3Q3LI67 103 aa0.5□□□□□ -2.33
RNU6-239P-201ENST00000390990 KRTAP13-4Q3LI77 160 aa0.5□□□□□ -2.33
RNU6-239P-201ENST00000390990 PAN3Q58A45 887 aaKnown RBP0.5□□□□□ -2.33
RNU6-239P-201ENST00000390990 ZRANB3Q5FWF4 1079 aa0.5□□□□□ -2.33
RNU6-239P-201ENST00000390990 NHSL2Q5HYW2 709 aa0.5□□□□□ -2.33
RNU6-239P-201ENST00000390990 FAAH2Q6GMR7 532 aa0.5□□□□□ -2.33
RNU6-239P-201ENST00000390990 TMEM211Q6ICI0 200 aa0.5□□□□□ -2.33
RNU6-239P-201ENST00000390990 PRR27Q6MZM9 219 aa0.5□□□□□ -2.33
RNU6-239P-201ENST00000390990 PXKQ7Z7A4 578 aa0.5□□□□□ -2.33
RNU6-239P-201ENST00000390990 APOBEC3FQ8IUX4 373 aaKnown RBP0.5□□□□□ -2.33
RNU6-239P-201ENST00000390990 ERI1Q8IV48 349 aaKnown RBP0.5□□□□□ -2.33
RNU6-239P-201ENST00000390990 CARNMT1Q8N4J0 409 aa0.5□□□□□ -2.33
RNU6-239P-201ENST00000390990 TBCKQ8TEA7 893 aa0.5□□□□□ -2.33
RNU6-239P-201ENST00000390990 TSACCQ96A04 125 aaPredicted RBP0.5□□□□□ -2.33
RNU6-239P-201ENST00000390990 CASD1Q96PB1 797 aa0.5□□□□□ -2.33
RNU6-239P-201ENST00000390990 ARPC5LQ9BPX5 153 aa0.5□□□□□ -2.33
RNU6-239P-201ENST00000390990 JPH2Q9BR39 696 aaPredicted RBP0.5□□□□□ -2.33
RNU6-239P-201ENST00000390990 NMUR2Q9GZQ4 415 aa0.5□□□□□ -2.33
RNU6-239P-201ENST00000390990 MMP27Q9H306 513 aa0.5□□□□□ -2.33
RNU6-239P-201ENST00000390990 C3orf14Q9HBI5 128 aa0.5□□□□□ -2.33
RNU6-239P-201ENST00000390990 ARHGEF38Q9NXL2 777 aa0.5□□□□□ -2.33
RNU6-239P-201ENST00000390990 RCOR3Q9P2K3 495 aaPredicted RBP0.5□□□□□ -2.33
RNU6-239P-201ENST00000390990 SEC63Q9UGP8 760 aaKnown RBP0.5□□□□□ -2.33
RNU6-239P-201ENST00000390990 KLHL21Q9UJP4 597 aa0.5□□□□□ -2.33
RNU6-239P-201ENST00000390990 CA5BQ9Y2D0 317 aa0.5□□□□□ -2.33
RNU6-239P-201ENST00000390990 DGKBQ9Y6T7 804 aa0.5□□□□□ -2.33
RNU6-239P-201ENST00000390990 CHD4Q14839 1912 aa0.49□□□□□ -2.33
RNU6-239P-201ENST00000390990 KIAA1217Q5T5P2 1943 aa0.49□□□□□ -2.33
RNU6-239P-201ENST00000390990 CCDC189A1A4V9 331 aa0.49□□□□□ -2.33
RNU6-239P-201ENST00000390990 FSD2A1L4K1 749 aa0.49□□□□□ -2.33
RNU6-239P-201ENST00000390990 LMO7DNF2Z398 122 aa0.49□□□□□ -2.33
RNU6-239P-201ENST00000390990 GPAA1O43292 621 aa0.49□□□□□ -2.33
RNU6-239P-201ENST00000390990 SLC35E2P0CK97 266 aa0.49□□□□□ -2.33
RNU6-239P-201ENST00000390990 ALDH3B1P43353 468 aa0.49□□□□□ -2.33
RNU6-239P-201ENST00000390990 P2RY4P51582 365 aa0.49□□□□□ -2.33
RNU6-239P-201ENST00000390990 PNLIPRP2P54317 469 aa0.49□□□□□ -2.33
RNU6-239P-201ENST00000390990 EGFEM1PQ0D2K5 195 aa0.49□□□□□ -2.33
RNU6-239P-201ENST00000390990 OVGP1Q12889 678 aa0.49□□□□□ -2.33
RNU6-239P-201ENST00000390990 CUL3Q13618 768 aa0.49□□□□□ -2.33
RNU6-239P-201ENST00000390990 FASTKQ14296 549 aaKnown RBP0.49□□□□□ -2.33
RNU6-239P-201ENST00000390990 GPNMBQ14956 572 aa0.49□□□□□ -2.33
RNU6-239P-201ENST00000390990 MPPED2Q15777 294 aa0.49□□□□□ -2.33
RNU6-239P-201ENST00000390990 NPTX1Q15818 432 aa0.49□□□□□ -2.33
RNU6-239P-201ENST00000390990 GCNT7Q6ZNI0 430 aa0.49□□□□□ -2.33
RNU6-239P-201ENST00000390990 IKBIPQ70UQ0 350 aa0.49□□□□□ -2.33
RNU6-239P-201ENST00000390990 Q71RC1 249 aaPredicted RBP0.49□□□□□ -2.33
RNU6-239P-201ENST00000390990 CCDC71Q8IV32 467 aaPredicted RBP0.49□□□□□ -2.33
RNU6-239P-201ENST00000390990 CCDC60Q8IWA6 550 aaPredicted RBP0.49□□□□□ -2.33
RNU6-239P-201ENST00000390990 ZNF781Q8N8C0 355 aa0.49□□□□□ -2.33
RNU6-239P-201ENST00000390990 OR13F1Q8NGS4 319 aa0.49□□□□□ -2.33
RNU6-239P-201ENST00000390990 PCNPQ8WW12 178 aaKnown RBP0.49□□□□□ -2.33
RNU6-239P-201ENST00000390990 NSUN4Q96CB9 384 aaKnown RBP0.49□□□□□ -2.33
RNU6-239P-201ENST00000390990 SDCBP2Q9H190 292 aa0.49□□□□□ -2.33
RNU6-239P-201ENST00000390990 HPS4Q9NQG7 708 aa0.49□□□□□ -2.33
RNU6-239P-201ENST00000390990 RNF150Q9ULK6 438 aa0.49□□□□□ -2.33
RNU6-239P-201ENST00000390990 LTBP1Q14766 1721 aa0.49□□□□□ -2.33
RNU6-239P-201ENST00000390990 IL16Q14005 1332 aa0.48□□□□□ -2.33
RNU6-239P-201ENST00000390990 ZNF644Q9H582 1327 aaPredicted RBP0.48□□□□□ -2.33
RNU6-239P-201ENST00000390990 LOC105371045A0A1W2PR82 267 aa0.48□□□□□ -2.33
RNU6-239P-201ENST00000390990 AP3D1O14617 1153 aa0.48□□□□□ -2.33
RNU6-239P-201ENST00000390990 ATP6AP2O75787 350 aa0.48□□□□□ -2.33
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms