RNA–Protein interactions for RNA: ENST00000379599.6

NHLRC3-201, Transcript of NHL repeat containing 3, humanhuman

TSL 1 (best) BASIC

Gene NHLRC3, Length 3,275 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NHLRC3-201ENST00000379599 HS6ST2Q96MM7 605 aa8.21□□□□□ -1.1
NHLRC3-201ENST00000379599 SPRTNQ9H040 489 aaPredicted RBP8.21□□□□□ -1.1
NHLRC3-201ENST00000379599 WNT5BQ9H1J7 359 aa8.21□□□□□ -1.1
NHLRC3-201ENST00000379599 ANKRA2Q9H9E1 313 aa8.21□□□□□ -1.1
NHLRC3-201ENST00000379599 BEX1Q9HBH7 125 aa8.21□□□□□ -1.1
NHLRC3-201ENST00000379599 NUDT15Q9NV35 164 aa8.21□□□□□ -1.1
NHLRC3-201ENST00000379599 DNAJC15Q9Y5T4 150 aa8.21□□□□□ -1.1
NHLRC3-201ENST00000379599 CDH10Q9Y6N8 788 aa8.21□□□□□ -1.1
NHLRC3-201ENST00000379599 RGPD5Q99666 1765 aa8.21□□□□□ -1.1
NHLRC3-201ENST00000379599 A0A0A0MRY4 1105 aa8.21□□□□□ -1.1
NHLRC3-201ENST00000379599 K7ERI5 159 aa8.21□□□□□ -1.1
NHLRC3-201ENST00000379599 FPGTO14772 594 aa8.21□□□□□ -1.1
NHLRC3-201ENST00000379599 TCAPO15273 167 aa8.21□□□□□ -1.1
NHLRC3-201ENST00000379599 SDC3O75056 442 aa8.21□□□□□ -1.1
NHLRC3-201ENST00000379599 NFICP08651 508 aa8.21□□□□□ -1.1
NHLRC3-201ENST00000379599 HIST1H2AGP0C0S8 130 aaPredicted RBP8.21□□□□□ -1.1
NHLRC3-201ENST00000379599 HIST1H2ADP20671 130 aa8.21□□□□□ -1.1
NHLRC3-201ENST00000379599 WARSP23381 471 aaKnown RBP8.21□□□□□ -1.1
NHLRC3-201ENST00000379599 CYP2F1P24903 491 aa8.21□□□□□ -1.1
NHLRC3-201ENST00000379599 CD79BP40259 229 aa8.21□□□□□ -1.1
NHLRC3-201ENST00000379599 SOX3P41225 446 aa8.21□□□□□ -1.1
NHLRC3-201ENST00000379599 AGFG1P52594 562 aaKnown RBP8.21□□□□□ -1.1
NHLRC3-201ENST00000379599 KHDRBS1Q07666 443 aaKnown RBP eCLIP8.21□□□□□ -1.1
NHLRC3-201ENST00000379599 P2RY14Q15391 338 aa8.21□□□□□ -1.1
NHLRC3-201ENST00000379599 SF3A2Q15428 464 aaKnown RBP8.21□□□□□ -1.1
NHLRC3-201ENST00000379599 SFRP5Q5T4F7 317 aa8.21□□□□□ -1.1
NHLRC3-201ENST00000379599 HIST2H2AA3Q6FI13 130 aa8.21□□□□□ -1.1
NHLRC3-201ENST00000379599 NOTUMQ6P988 496 aa8.21□□□□□ -1.1
NHLRC3-201ENST00000379599 IKBIPQ70UQ0 350 aa8.21□□□□□ -1.1
NHLRC3-201ENST00000379599 PID1Q7Z2X4 250 aa8.21□□□□□ -1.1
NHLRC3-201ENST00000379599 ADGRF3Q8IZF5 1079 aa8.21□□□□□ -1.1
NHLRC3-201ENST00000379599 DNAJC22Q8N4W6 341 aa8.21□□□□□ -1.1
NHLRC3-201ENST00000379599 APH1BQ8WW43 257 aa8.21□□□□□ -1.1
NHLRC3-201ENST00000379599 FBXO17Q96EF6 278 aa8.21□□□□□ -1.1
NHLRC3-201ENST00000379599 HIST1H2AHQ96KK5 128 aa8.21□□□□□ -1.1
NHLRC3-201ENST00000379599 SPATA13Q96N96 652 aa8.21□□□□□ -1.1
NHLRC3-201ENST00000379599 KCNC2Q96PR1 638 aa8.21□□□□□ -1.1
NHLRC3-201ENST00000379599 SIGLEC11Q96RL6 698 aa8.21□□□□□ -1.1
NHLRC3-201ENST00000379599 HIST1H2AJQ99878 128 aa8.21□□□□□ -1.1
NHLRC3-201ENST00000379599 MRPL45Q9BRJ2 306 aaKnown RBP8.21□□□□□ -1.1
NHLRC3-201ENST00000379599 TMEM43Q9BTV4 400 aa8.21□□□□□ -1.1
NHLRC3-201ENST00000379599 TGIF2Q9GZN2 237 aa8.21□□□□□ -1.1
NHLRC3-201ENST00000379599 RHOJQ9H4E5 214 aa8.21□□□□□ -1.1
NHLRC3-201ENST00000379599 SLCO1C1Q9NYB5 712 aa8.21□□□□□ -1.1
NHLRC3-201ENST00000379599 PCDHGC4Q9Y5F7 938 aa8.21□□□□□ -1.1
NHLRC3-201ENST00000379599 PCDHGB7Q9Y5F8 929 aa8.21□□□□□ -1.1
NHLRC3-201ENST00000379599 PCDHGA6Q9Y5G7 932 aa8.21□□□□□ -1.1
NHLRC3-201ENST00000379599 PCDHGA5Q9Y5G8 931 aa8.21□□□□□ -1.1
NHLRC3-201ENST00000379599 PCDHGA1Q9Y5H4 931 aa8.21□□□□□ -1.1
NHLRC3-201ENST00000379599 FAM95CA0A1B0GW59 222 aa8.2□□□□□ -1.1
NHLRC3-201ENST00000379599 SLC35F4A4IF30 521 aa8.2□□□□□ -1.1
NHLRC3-201ENST00000379599 ZNF682O95780 498 aa8.2□□□□□ -1.1
NHLRC3-201ENST00000379599 ALDOBP05062 364 aa8.2□□□□□ -1.1
NHLRC3-201ENST00000379599 ALPIP09923 528 aa8.2□□□□□ -1.1
NHLRC3-201ENST00000379599 ENGP17813 658 aa8.2□□□□□ -1.1
NHLRC3-201ENST00000379599 PSMA1P25786 263 aaKnown RBP8.2□□□□□ -1.1
NHLRC3-201ENST00000379599 DNAJB13P59910 316 aa8.2□□□□□ -1.1
NHLRC3-201ENST00000379599 POU4F2Q12837 409 aa8.2□□□□□ -1.1
NHLRC3-201ENST00000379599 GK2Q14410 553 aaPredicted RBP8.2□□□□□ -1.1
NHLRC3-201ENST00000379599 NR6A1Q15406 480 aa8.2□□□□□ -1.1
NHLRC3-201ENST00000379599 TARBP2Q15633 366 aaKnown RBP8.2□□□□□ -1.1
NHLRC3-201ENST00000379599 FAM182BQ5T319 152 aa8.2□□□□□ -1.1
NHLRC3-201ENST00000379599 MSANTD2Q6P1R3 559 aa8.2□□□□□ -1.1
NHLRC3-201ENST00000379599 ANGPTL8Q6UXH0 198 aa8.2□□□□□ -1.1
NHLRC3-201ENST00000379599 HSD17B13Q7Z5P4 300 aaPredicted RBP8.2□□□□□ -1.1
NHLRC3-201ENST00000379599 PPP3R2Q96LZ3 170 aa8.2□□□□□ -1.1
NHLRC3-201ENST00000379599 NTMT1Q9BV86 223 aa8.2□□□□□ -1.1
NHLRC3-201ENST00000379599 RAD18Q9NS91 495 aa8.2□□□□□ -1.1
NHLRC3-201ENST00000379599 SEC14L3Q9UDX4 400 aa8.2□□□□□ -1.1
NHLRC3-201ENST00000379599 YARS2Q9Y2Z4 477 aaKnown RBP8.2□□□□□ -1.1
NHLRC3-201ENST00000379599 ZCWPW2A0A1B0GU75 182 aa8.2□□□□□ -1.1
NHLRC3-201ENST00000379599 KLRG2A4D1S0 409 aaPredicted RBP8.2□□□□□ -1.1
NHLRC3-201ENST00000379599 GPR31O00270 319 aa8.2□□□□□ -1.1
NHLRC3-201ENST00000379599 OIP5O43482 229 aa8.2□□□□□ -1.1
NHLRC3-201ENST00000379599 AOC2O75106 756 aa8.2□□□□□ -1.1
NHLRC3-201ENST00000379599 EEDO75530 441 aaKnown RBP8.2□□□□□ -1.1
NHLRC3-201ENST00000379599 MATN4O95460 622 aa8.2□□□□□ -1.1
NHLRC3-201ENST00000379599 MOCS2O96007 188 aaPredicted RBP8.2□□□□□ -1.1
NHLRC3-201ENST00000379599 NUDT7P0C024 238 aa8.2□□□□□ -1.1
NHLRC3-201ENST00000379599 SDHBP21912 280 aa8.2□□□□□ -1.1
NHLRC3-201ENST00000379599 SREBF1P36956 1147 aa8.2□□□□□ -1.1
NHLRC3-201ENST00000379599 ACLYP53396 1101 aa8.2□□□□□ -1.1
NHLRC3-201ENST00000379599 TAS2R60P59551 318 aa8.2□□□□□ -1.1
NHLRC3-201ENST00000379599 NPRL3Q12980 569 aa8.2□□□□□ -1.1
NHLRC3-201ENST00000379599 NCF4Q15080 339 aa8.2□□□□□ -1.1
NHLRC3-201ENST00000379599 CARD16Q5EG05 197 aa8.2□□□□□ -1.1
NHLRC3-201ENST00000379599 COQ5Q5HYK3 327 aa8.2□□□□□ -1.1
NHLRC3-201ENST00000379599 CNIH2Q6PI25 160 aa8.2□□□□□ -1.1
NHLRC3-201ENST00000379599 TMEM107Q6UX40 140 aa8.2□□□□□ -1.1
NHLRC3-201ENST00000379599 SLC9B2Q86UD5 537 aa8.2□□□□□ -1.1
NHLRC3-201ENST00000379599 ZDHHC21Q8IVQ6 265 aa8.2□□□□□ -1.1
NHLRC3-201ENST00000379599 FAM126BQ8IXS8 530 aa8.2□□□□□ -1.1
NHLRC3-201ENST00000379599 BOLLQ8N9W6 283 aaKnown RBP8.2□□□□□ -1.1
NHLRC3-201ENST00000379599 RHBDF1Q96CC6 855 aa8.2□□□□□ -1.1
NHLRC3-201ENST00000379599 GMCL1Q96IK5 515 aa8.2□□□□□ -1.1
NHLRC3-201ENST00000379599 TCF25Q9BQ70 676 aa8.2□□□□□ -1.1
NHLRC3-201ENST00000379599 GAREM1Q9H706 876 aa8.2□□□□□ -1.1
NHLRC3-201ENST00000379599 TMOD3Q9NYL9 352 aa8.2□□□□□ -1.1
NHLRC3-201ENST00000379599 TAS2R3Q9NYW6 316 aa8.2□□□□□ -1.1
NHLRC3-201ENST00000379599 POMT2Q9UKY4 750 aa8.2□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms