RNA–Protein interactions for RNA: ENST00000378169.7

NPHP4-203, Transcript of nephrocystin 4, humanhuman

TSL 1 (best)

Gene NPHP4, Length 4,213 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-203ENST00000378169 REEP3Q6NUK4 255 aa12.7□□□□□ -0.38
NPHP4-203ENST00000378169 OR10H4Q8NGA5 316 aa12.7□□□□□ -0.38
NPHP4-203ENST00000378169 TRMT2BQ96GJ1 504 aaKnown RBP12.7□□□□□ -0.38
NPHP4-203ENST00000378169 IFT27Q9BW83 186 aa12.7□□□□□ -0.38
NPHP4-203ENST00000378169 SNTG1Q9NSN8 517 aa12.7□□□□□ -0.38
NPHP4-203ENST00000378169 SPATA2Q9UM82 520 aa12.7□□□□□ -0.38
NPHP4-203ENST00000378169 SSC5DA1L4H1 1573 aa12.7□□□□□ -0.38
NPHP4-203ENST00000378169 COL5A3P25940 1745 aaPredicted RBP12.7□□□□□ -0.38
NPHP4-203ENST00000378169 SLC16A5O15375 505 aa12.7□□□□□ -0.38
NPHP4-203ENST00000378169 TNFRSF1BP20333 461 aa12.7□□□□□ -0.38
NPHP4-203ENST00000378169 PIK3CBP42338 1070 aa12.7□□□□□ -0.38
NPHP4-203ENST00000378169 TYSND1Q2T9J0 566 aa12.7□□□□□ -0.38
NPHP4-203ENST00000378169 MPP7Q5T2T1 576 aa12.7□□□□□ -0.38
NPHP4-203ENST00000378169 DUS1LQ6P1R4 473 aaKnown RBP12.7□□□□□ -0.38
NPHP4-203ENST00000378169 ZNF551Q7Z340 670 aaPredicted RBP12.7□□□□□ -0.38
NPHP4-203ENST00000378169 GRHL3Q8TE85 626 aa12.7□□□□□ -0.38
NPHP4-203ENST00000378169 KCNS3Q9BQ31 491 aa12.7□□□□□ -0.38
NPHP4-203ENST00000378169 ETAA1Q9NY74 926 aa12.7□□□□□ -0.38
NPHP4-203ENST00000378169 AKAP7Q9P0M2 348 aaPredicted RBP12.7□□□□□ -0.38
NPHP4-203ENST00000378169 ACSL5Q9ULC5 683 aa12.7□□□□□ -0.38
NPHP4-203ENST00000378169 CACNA1CQ13936 2221 aa12.7□□□□□ -0.38
NPHP4-203ENST00000378169 BTN3A3O00478 584 aa12.7□□□□□ -0.38
NPHP4-203ENST00000378169 PGRMC2O15173 223 aa12.7□□□□□ -0.38
NPHP4-203ENST00000378169 TBX1O43435 398 aa12.7□□□□□ -0.38
NPHP4-203ENST00000378169 ZNF182P17025 639 aaPredicted RBP12.7□□□□□ -0.38
NPHP4-203ENST00000378169 INHBCP55103 352 aa12.7□□□□□ -0.38
NPHP4-203ENST00000378169 CRTC2Q53ET0 693 aaPredicted RBP12.7□□□□□ -0.38
NPHP4-203ENST00000378169 RBM48Q5RL73 367 aaKnown RBP12.7□□□□□ -0.38
NPHP4-203ENST00000378169 FAM91A1Q658Y4 838 aa12.7□□□□□ -0.38
NPHP4-203ENST00000378169 MZT2AQ6P582 158 aa12.7□□□□□ -0.38
NPHP4-203ENST00000378169 HACD2Q6Y1H2 254 aa12.7□□□□□ -0.38
NPHP4-203ENST00000378169 COMMD6Q7Z4G1 85 aa12.7□□□□□ -0.38
NPHP4-203ENST00000378169 CBARPQ8N350 705 aaPredicted RBP12.7□□□□□ -0.38
NPHP4-203ENST00000378169 TEX26Q8N6G2 289 aa12.7□□□□□ -0.38
NPHP4-203ENST00000378169 OR5AR1Q8NGP9 310 aa12.7□□□□□ -0.38
NPHP4-203ENST00000378169 TM9SF3Q9HD45 589 aa12.7□□□□□ -0.38
NPHP4-203ENST00000378169 HRASLS2Q9NWW9 162 aa12.7□□□□□ -0.38
NPHP4-203ENST00000378169 TRNAU1APQ9NX07 287 aaKnown RBP12.7□□□□□ -0.38
NPHP4-203ENST00000378169 GPRC5BQ9NZH0 403 aa12.7□□□□□ -0.38
NPHP4-203ENST00000378169 RREB1Q92766 1687 aa12.7□□□□□ -0.38
NPHP4-203ENST00000378169 UBR3Q6ZT12 1888 aa12.7□□□□□ -0.38
NPHP4-203ENST00000378169 RIIAD1A6NNX1 92 aa12.7□□□□□ -0.38
NPHP4-203ENST00000378169 ARHGEF33A8MVX0 844 aa12.7□□□□□ -0.38
NPHP4-203ENST00000378169 SLC30A4O14863 429 aa12.7□□□□□ -0.38
NPHP4-203ENST00000378169 TLX2O43763 284 aaPredicted RBP12.7□□□□□ -0.38
NPHP4-203ENST00000378169 MPZL2O60487 215 aa12.7□□□□□ -0.38
NPHP4-203ENST00000378169 PDHA2P29803 388 aa12.7□□□□□ -0.38
NPHP4-203ENST00000378169 HOXC13P31276 330 aa12.7□□□□□ -0.38
NPHP4-203ENST00000378169 PRRT3Q5FWE3 981 aa12.7□□□□□ -0.38
NPHP4-203ENST00000378169 CXXC5Q7LFL8 322 aaKnown RBP12.7□□□□□ -0.38
NPHP4-203ENST00000378169 CAMKVQ8NCB2 501 aa12.7□□□□□ -0.38
NPHP4-203ENST00000378169 RAB7BQ96AH8 199 aa12.7□□□□□ -0.38
NPHP4-203ENST00000378169 TOX2Q96NM4 488 aa12.7□□□□□ -0.38
NPHP4-203ENST00000378169 PPIEQ9UNP9 301 aaKnown RBP12.7□□□□□ -0.38
NPHP4-203ENST00000378169 SCN1AP35498 2009 aa12.69□□□□□ -0.38
NPHP4-203ENST00000378169 TNFRSF21O75509 655 aa12.69□□□□□ -0.38
NPHP4-203ENST00000378169 CDC123O75794 336 aaPredicted RBP12.69□□□□□ -0.38
NPHP4-203ENST00000378169 GRIA2P42262 883 aa12.69□□□□□ -0.38
NPHP4-203ENST00000378169 RNF144AP50876 292 aaPredicted RBP12.69□□□□□ -0.38
NPHP4-203ENST00000378169 RPS21P63220 83 aaKnown RBP12.69□□□□□ -0.38
NPHP4-203ENST00000378169 LCN8Q6JVE9 175 aa12.69□□□□□ -0.38
NPHP4-203ENST00000378169 LIPIQ6XZB0 460 aa12.69□□□□□ -0.38
NPHP4-203ENST00000378169 TMPRSS11AQ6ZMR5 421 aa12.69□□□□□ -0.38
NPHP4-203ENST00000378169 RETREG3Q86VR2 466 aa12.69□□□□□ -0.38
NPHP4-203ENST00000378169 HS3ST5Q8IZT8 346 aa12.69□□□□□ -0.38
NPHP4-203ENST00000378169 MARVELD2Q8N4S9 558 aa12.69□□□□□ -0.38
NPHP4-203ENST00000378169 OR4C6Q8NH72 309 aa12.69□□□□□ -0.38
NPHP4-203ENST00000378169 FGF13Q92913 245 aa12.69□□□□□ -0.38
NPHP4-203ENST00000378169 C5orf34Q96MH7 638 aa12.69□□□□□ -0.38
NPHP4-203ENST00000378169 TRIB3Q96RU7 358 aa12.69□□□□□ -0.38
NPHP4-203ENST00000378169 POFUT2Q9Y2G5 429 aa12.69□□□□□ -0.38
NPHP4-203ENST00000378169 MRPS17Q9Y2R5 130 aaKnown RBP12.69□□□□□ -0.38
NPHP4-203ENST00000378169 SPIN1Q9Y657 262 aaPredicted RBP12.69□□□□□ -0.38
NPHP4-203ENST00000378169 STON1Q9Y6Q2 735 aa12.69□□□□□ -0.38
NPHP4-203ENST00000378169 VEGFDO43915 354 aa12.69□□□□□ -0.38
NPHP4-203ENST00000378169 PRMT3O60678 531 aa12.69□□□□□ -0.38
NPHP4-203ENST00000378169 OR12D1P0DN82 309 aa12.69□□□□□ -0.38
NPHP4-203ENST00000378169 RPS3P23396 243 aaKnown RBP eCLIP12.69□□□□□ -0.38
NPHP4-203ENST00000378169 LRP8Q14114 963 aa12.69□□□□□ -0.38
NPHP4-203ENST00000378169 RCAN2Q14206 197 aa12.69□□□□□ -0.38
NPHP4-203ENST00000378169 ZNF234Q14588 700 aa12.69□□□□□ -0.38
NPHP4-203ENST00000378169 TAF13Q15543 124 aa12.69□□□□□ -0.38
NPHP4-203ENST00000378169 KIAA1614Q5VZ46 1190 aa12.69□□□□□ -0.38
NPHP4-203ENST00000378169 CEP68Q76N32 757 aa12.69□□□□□ -0.38
NPHP4-203ENST00000378169 PARS2Q7L3T8 475 aaKnown RBP12.69□□□□□ -0.38
NPHP4-203ENST00000378169 TMEM126BQ8IUX1 230 aa12.69□□□□□ -0.38
NPHP4-203ENST00000378169 GJD3Q8N144 294 aa12.69□□□□□ -0.38
NPHP4-203ENST00000378169 RNF31Q96EP0 1072 aa12.69□□□□□ -0.38
NPHP4-203ENST00000378169 MYRFLQ96LU7 910 aa12.69□□□□□ -0.38
NPHP4-203ENST00000378169 IRAK3Q9Y616 596 aa12.69□□□□□ -0.38
NPHP4-203ENST00000378169 OR52A4PA6NMU1 304 aa12.69□□□□□ -0.38
NPHP4-203ENST00000378169 A8MU76 341 aa12.69□□□□□ -0.38
NPHP4-203ENST00000378169 FOXD2O60548 495 aaPredicted RBP12.69□□□□□ -0.38
NPHP4-203ENST00000378169 PLOD3O60568 738 aa12.69□□□□□ -0.38
NPHP4-203ENST00000378169 F11P03951 625 aa12.69□□□□□ -0.38
NPHP4-203ENST00000378169 HMGA1P17096 107 aaKnown RBP12.69□□□□□ -0.38
NPHP4-203ENST00000378169 MATN1P21941 496 aa12.69□□□□□ -0.38
NPHP4-203ENST00000378169 RPS3AP61247 264 aaKnown RBP12.69□□□□□ -0.38
NPHP4-203ENST00000378169 MLLT1Q03111 559 aaPredicted RBP12.69□□□□□ -0.38
NPHP4-203ENST00000378169 CCDC92Q53HC0 331 aaPredicted RBP12.69□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 83.7 ms