RNA–Protein interactions for RNA: ENST00000372755.7

VCL-202, Transcript of vinculin, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene VCL, Length 6,489 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCL-202ENST00000372755 CD244Q9BZW8 370 aa11.16□□□□□ -0.62
VCL-202ENST00000372755 LRRN3Q9H3W5 708 aa11.16□□□□□ -0.62
VCL-202ENST00000372755 PRODH2Q9UF12 536 aa11.16□□□□□ -0.62
VCL-202ENST00000372755 TMPRSS11EQ9UL52 423 aa11.16□□□□□ -0.62
VCL-202ENST00000372755 RNF6Q9Y252 685 aa11.16□□□□□ -0.62
VCL-202ENST00000372755 KCNIP3Q9Y2W7 256 aa11.16□□□□□ -0.62
VCL-202ENST00000372755 ZNF451Q9Y4E5 1061 aa11.16□□□□□ -0.62
VCL-202ENST00000372755 C6orf47O95873 294 aa11.16□□□□□ -0.62
VCL-202ENST00000372755 IFNA2P01563 188 aa11.16□□□□□ -0.62
VCL-202ENST00000372755 RBMXP38159 391 aaKnown RBP11.16□□□□□ -0.62
VCL-202ENST00000372755 CCNHP51946 323 aaPredicted RBP11.16□□□□□ -0.62
VCL-202ENST00000372755 NUDT6P53370 316 aa11.16□□□□□ -0.62
VCL-202ENST00000372755 PER3P56645 1201 aa11.16□□□□□ -0.62
VCL-202ENST00000372755 PAFAH1B3Q15102 231 aaKnown RBP11.16□□□□□ -0.62
VCL-202ENST00000372755 ANKRD26P1Q6NSI1 321 aa11.16□□□□□ -0.62
VCL-202ENST00000372755 TMEM234Q8WY98 164 aa11.16□□□□□ -0.62
VCL-202ENST00000372755 KIAA1191Q96A73 305 aa11.16□□□□□ -0.62
VCL-202ENST00000372755 KIAA1143Q96AT1 154 aaPredicted RBP11.16□□□□□ -0.62
VCL-202ENST00000372755 SH3PXD2BA1X283 911 aa11.16□□□□□ -0.62
VCL-202ENST00000372755 TTC24A2A3L6 582 aaPredicted RBP11.16□□□□□ -0.62
VCL-202ENST00000372755 LCHNA4D1U4 455 aa11.16□□□□□ -0.62
VCL-202ENST00000372755 GRXCR1A8MXD5 290 aa11.16□□□□□ -0.62
VCL-202ENST00000372755 FLRT2O43155 660 aa11.16□□□□□ -0.62
VCL-202ENST00000372755 PROM1O43490 865 aa11.16□□□□□ -0.62
VCL-202ENST00000372755 HOXB2P14652 356 aa11.16□□□□□ -0.62
VCL-202ENST00000372755 CCNOP22674 350 aa11.16□□□□□ -0.62
VCL-202ENST00000372755 ACADVLP49748 655 aa11.16□□□□□ -0.62
VCL-202ENST00000372755 RAB8AP61006 207 aa11.16□□□□□ -0.62
VCL-202ENST00000372755 POU6F2P78424 691 aaPredicted RBP11.16□□□□□ -0.62
VCL-202ENST00000372755 CYBRD1Q53TN4 286 aa11.16□□□□□ -0.62
VCL-202ENST00000372755 REEP3Q6NUK4 255 aa11.16□□□□□ -0.62
VCL-202ENST00000372755 NOXRED1Q6NXP6 359 aa11.16□□□□□ -0.62
VCL-202ENST00000372755 ZNF572Q7Z3I7 529 aaPredicted RBP11.16□□□□□ -0.62
VCL-202ENST00000372755 TMEM126BQ8IUX1 230 aa11.16□□□□□ -0.62
VCL-202ENST00000372755 C7orf57Q8NEG2 295 aa11.16□□□□□ -0.62
VCL-202ENST00000372755 MAPK15Q8TD08 544 aa11.16□□□□□ -0.62
VCL-202ENST00000372755 LRRC46Q96FV0 321 aa11.16□□□□□ -0.62
VCL-202ENST00000372755 NECAB3Q96P71 396 aaPredicted RBP11.16□□□□□ -0.62
VCL-202ENST00000372755 ENAMQ9NRM1 1142 aa11.16□□□□□ -0.62
VCL-202ENST00000372755 ZDHHC18Q9NUE0 388 aa11.16□□□□□ -0.62
VCL-202ENST00000372755 WDR45Q9Y484 360 aa11.16□□□□□ -0.62
VCL-202ENST00000372755 SPEF1Q9Y4P9 236 aa11.16□□□□□ -0.62
VCL-202ENST00000372755 ADGRB1O14514 1584 aa11.16□□□□□ -0.62
VCL-202ENST00000372755 C11orf97A0A1B0GVM6 126 aaPredicted RBP11.16□□□□□ -0.62
VCL-202ENST00000372755 A0A1W2PPL8 197 aa11.16□□□□□ -0.62
VCL-202ENST00000372755 H3BUI4 141 aa11.16□□□□□ -0.62
VCL-202ENST00000372755 DLGAP1O14490 977 aa11.16□□□□□ -0.62
VCL-202ENST00000372755 G6PDP11413 515 aa11.16□□□□□ -0.62
VCL-202ENST00000372755 ENDOUP21128 410 aaKnown RBP11.16□□□□□ -0.62
VCL-202ENST00000372755 UQCRC2P22695 453 aa11.16□□□□□ -0.62
VCL-202ENST00000372755 IL1R2P27930 398 aa11.16□□□□□ -0.62
VCL-202ENST00000372755 SHMT2P34897 504 aa11.16□□□□□ -0.62
VCL-202ENST00000372755 AIMP2Q13155 320 aaKnown RBP11.16□□□□□ -0.62
VCL-202ENST00000372755 PTCHD3Q3KNS1 767 aa11.16□□□□□ -0.62
VCL-202ENST00000372755 NADK2Q4G0N4 442 aa11.16□□□□□ -0.62
VCL-202ENST00000372755 TXNDC8Q6A555 127 aa11.16□□□□□ -0.62
VCL-202ENST00000372755 TICAM1Q8IUC6 712 aa11.16□□□□□ -0.62
VCL-202ENST00000372755 OR5M3Q8NGP4 307 aa11.16□□□□□ -0.62
VCL-202ENST00000372755 KCNH6Q9H252 994 aa11.16□□□□□ -0.62
VCL-202ENST00000372755 VILLO15195 856 aa11.16□□□□□ -0.62
VCL-202ENST00000372755 STC1P52823 247 aa11.16□□□□□ -0.62
VCL-202ENST00000372755 WDR4P57081 412 aaKnown RBP11.16□□□□□ -0.62
VCL-202ENST00000372755 PLEKHS1Q5SXH7 462 aa11.16□□□□□ -0.62
VCL-202ENST00000372755 DCAF4L2Q8NA75 395 aa11.16□□□□□ -0.62
VCL-202ENST00000372755 FAM83CQ9BQN1 747 aa11.16□□□□□ -0.62
VCL-202ENST00000372755 POLDIP3Q9BY77 421 aaKnown RBP11.16□□□□□ -0.62
VCL-202ENST00000372755 VNN3Q9NY84 501 aa11.16□□□□□ -0.62
VCL-202ENST00000372755 SOX1O00570 391 aaPredicted RBP11.15□□□□□ -0.62
VCL-202ENST00000372755 CAPN5O15484 640 aaPredicted RBP11.15□□□□□ -0.62
VCL-202ENST00000372755 AHSGP02765 367 aa11.15□□□□□ -0.62
VCL-202ENST00000372755 CREB1P16220 341 aa11.15□□□□□ -0.62
VCL-202ENST00000372755 LCN1P31025 176 aa11.15□□□□□ -0.62
VCL-202ENST00000372755 RFC2P35250 354 aa11.15□□□□□ -0.62
VCL-202ENST00000372755 ST3GAL4Q11206 333 aa11.15□□□□□ -0.62
VCL-202ENST00000372755 SERINC3Q13530 473 aa11.15□□□□□ -0.62
VCL-202ENST00000372755 SPATC1Q76KD6 591 aa11.15□□□□□ -0.62
VCL-202ENST00000372755 PIM3Q86V86 326 aa11.15□□□□□ -0.62
VCL-202ENST00000372755 PSD4Q8NDX1 1056 aa11.15□□□□□ -0.62
VCL-202ENST00000372755 NSMAFQ92636 917 aa11.15□□□□□ -0.62
VCL-202ENST00000372755 WACQ9BTA9 647 aa11.15□□□□□ -0.62
VCL-202ENST00000372755 G6PC3Q9BUM1 346 aa11.15□□□□□ -0.62
VCL-202ENST00000372755 BRF2Q9HAW0 419 aa11.15□□□□□ -0.62
VCL-202ENST00000372755 NLE1Q9NVX2 485 aaPredicted RBP11.15□□□□□ -0.62
VCL-202ENST00000372755 TMEM248Q9NWD8 314 aa11.15□□□□□ -0.62
VCL-202ENST00000372755 CACNG4Q9UBN1 327 aa11.15□□□□□ -0.62
VCL-202ENST00000372755 PTBP2Q9UKA9 531 aaKnown RBP11.15□□□□□ -0.62
VCL-202ENST00000372755 KCNK6Q9Y257 313 aa11.15□□□□□ -0.62
VCL-202ENST00000372755 LOC100509620A0A075B734 347 aa11.15□□□□□ -0.62
VCL-202ENST00000372755 TP53I11O14683 189 aa11.15□□□□□ -0.62
VCL-202ENST00000372755 IL3P08700 152 aa11.15□□□□□ -0.62
VCL-202ENST00000372755 C8orf89P0DMQ9 161 aa11.15□□□□□ -0.62
VCL-202ENST00000372755 PFKLP17858 780 aa11.15□□□□□ -0.62
VCL-202ENST00000372755 RPL10P27635 214 aaKnown RBP11.15□□□□□ -0.62
VCL-202ENST00000372755 RGS19P49795 217 aa11.15□□□□□ -0.62
VCL-202ENST00000372755 ZNF763Q0D2J5 394 aa11.15□□□□□ -0.62
VCL-202ENST00000372755 BNIP3Q12983 259 aa11.15□□□□□ -0.62
VCL-202ENST00000372755 ZNF404Q494X3 552 aa11.15□□□□□ -0.62
VCL-202ENST00000372755 NRROSQ86YC3 692 aa11.15□□□□□ -0.62
VCL-202ENST00000372755 ZNF283Q8N7M2 679 aa11.15□□□□□ -0.62
VCL-202ENST00000372755 TMEM68Q96MH6 324 aa11.15□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms