RNA–Protein interactions for RNA: ENST00000372146.4

GTF3C4-201, Transcript of general transcription factor IIIC subunit 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GTF3C4, Length 9,043 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C4-201ENST00000372146 PEA15Q15121 130 aa14.83□□□□□ -0.04
GTF3C4-201ENST00000372146 ARHGAP11AQ6P4F7 1023 aa14.83□□□□□ -0.04
GTF3C4-201ENST00000372146 P4HA3Q7Z4N8 544 aa14.83□□□□□ -0.04
GTF3C4-201ENST00000372146 RASGEF1CQ8N431 466 aa14.83□□□□□ -0.04
GTF3C4-201ENST00000372146 BEND7Q8N7W2 519 aaPredicted RBP14.83□□□□□ -0.04
GTF3C4-201ENST00000372146 PCDHGA6Q9Y5G7 932 aa14.83□□□□□ -0.04
GTF3C4-201ENST00000372146 OPN1SWP03999 348 aa14.83□□□□□ -0.04
GTF3C4-201ENST00000372146 LAPTM4AQ15012 233 aa14.83□□□□□ -0.04
GTF3C4-201ENST00000372146 TMEM119Q4V9L6 283 aa14.83□□□□□ -0.04
GTF3C4-201ENST00000372146 GPR135Q8IZ08 494 aa14.83□□□□□ -0.04
GTF3C4-201ENST00000372146 SLC15A4Q8N697 577 aa14.83□□□□□ -0.04
GTF3C4-201ENST00000372146 DNAJB8Q8NHS0 232 aa14.83□□□□□ -0.04
GTF3C4-201ENST00000372146 ATG4CQ96DT6 458 aa14.83□□□□□ -0.04
GTF3C4-201ENST00000372146 SCDO00767 359 aa14.83□□□□□ -0.04
GTF3C4-201ENST00000372146 HNRNPFP52597 415 aaKnown RBP14.83□□□□□ -0.04
GTF3C4-201ENST00000372146 PIGFQ07326 219 aa14.83□□□□□ -0.04
GTF3C4-201ENST00000372146 LY6KQ17RY6 165 aa14.83□□□□□ -0.04
GTF3C4-201ENST00000372146 PAN3Q58A45 887 aaKnown RBP14.83□□□□□ -0.04
GTF3C4-201ENST00000372146 FAM109AQ8N4B1 249 aa14.83□□□□□ -0.04
GTF3C4-201ENST00000372146 BANPQ8N9N5 519 aa14.83□□□□□ -0.04
GTF3C4-201ENST00000372146 SNAPC3Q92966 411 aa14.83□□□□□ -0.04
GTF3C4-201ENST00000372146 SDSLQ96GA7 329 aa14.83□□□□□ -0.04
GTF3C4-201ENST00000372146 HSH2DQ96JZ2 352 aa14.83□□□□□ -0.04
GTF3C4-201ENST00000372146 ZNF75AQ96N20 296 aa14.83□□□□□ -0.04
GTF3C4-201ENST00000372146 XRN2Q9H0D6 950 aaKnown RBP eCLIP14.83□□□□□ -0.045e-6■■□□□ 13
GTF3C4-201ENST00000372146 GCM1Q9NP62 436 aa14.83□□□□□ -0.04
GTF3C4-201ENST00000372146 RNF215Q9Y6U7 377 aa14.83□□□□□ -0.04
GTF3C4-201ENST00000372146 NUP205Q92621 2012 aa14.83□□□□□ -0.04
GTF3C4-201ENST00000372146 C1QTNF8P60827 252 aa14.83□□□□□ -0.04
GTF3C4-201ENST00000372146 FMO1Q01740 532 aa14.83□□□□□ -0.04
GTF3C4-201ENST00000372146 PCBP2Q15366 365 aaKnown RBP eCLIP14.83□□□□□ -0.043e-10■■■■□ 19.8
GTF3C4-201ENST00000372146 KIAA1324Q6UXG2 1013 aaKnown RBP14.83□□□□□ -0.04
GTF3C4-201ENST00000372146 ZBTB45Q96K62 511 aaPredicted RBP14.83□□□□□ -0.04
GTF3C4-201ENST00000372146 PCDHB14Q9Y5E9 798 aa14.83□□□□□ -0.04
GTF3C4-201ENST00000372146 CLIC1O00299 241 aa14.83□□□□□ -0.04
GTF3C4-201ENST00000372146 RCBTB2O95199 551 aa14.83□□□□□ -0.04
GTF3C4-201ENST00000372146 HOXD8P13378 290 aaPredicted RBP14.83□□□□□ -0.04
GTF3C4-201ENST00000372146 ACTA2P62736 377 aa14.83□□□□□ -0.04
GTF3C4-201ENST00000372146 ACTG2P63267 376 aa14.83□□□□□ -0.04
GTF3C4-201ENST00000372146 ACTC1P68032 377 aa14.83□□□□□ -0.04
GTF3C4-201ENST00000372146 ACTA1P68133 377 aa14.83□□□□□ -0.04
GTF3C4-201ENST00000372146 ELAVL2Q12926 359 aaKnown RBP14.83□□□□□ -0.04
GTF3C4-201ENST00000372146 TMEM205Q6UW68 189 aa14.83□□□□□ -0.04
GTF3C4-201ENST00000372146 SLC9A9Q8IVB4 645 aa14.83□□□□□ -0.04
GTF3C4-201ENST00000372146 CHTF18Q8WVB6 975 aa14.83□□□□□ -0.04
GTF3C4-201ENST00000372146 TLCD1Q96CP7 247 aa14.83□□□□□ -0.04
GTF3C4-201ENST00000372146 OR2AG2A6NM03 316 aa14.82□□□□□ -0.04
GTF3C4-201ENST00000372146 M0R2N6 131 aa14.82□□□□□ -0.04
GTF3C4-201ENST00000372146 PTBP3O95758 552 aaKnown RBP14.82□□□□□ -0.04
GTF3C4-201ENST00000372146 SLC26A2P50443 739 aa14.82□□□□□ -0.04
GTF3C4-201ENST00000372146 SNTB2Q13425 540 aaKnown RBP14.82□□□□□ -0.04
GTF3C4-201ENST00000372146 WSCD1Q658N2 575 aa14.82□□□□□ -0.04
GTF3C4-201ENST00000372146 CEACAM19Q7Z692 300 aa14.82□□□□□ -0.04
GTF3C4-201ENST00000372146 ADAM19Q9H013 955 aa14.82□□□□□ -0.04
GTF3C4-201ENST00000372146 A0A1B0GVI7 797 aa14.82□□□□□ -0.04
GTF3C4-201ENST00000372146 H7C1Q1 480 aa14.82□□□□□ -0.04
GTF3C4-201ENST00000372146 NMBRP28336 390 aa14.82□□□□□ -0.04
GTF3C4-201ENST00000372146 FAM83FQ8NEG4 500 aaPredicted RBP14.82□□□□□ -0.04
GTF3C4-201ENST00000372146 MOAP1Q96BY2 351 aa14.82□□□□□ -0.04
GTF3C4-201ENST00000372146 CD3GP09693 182 aa14.82□□□□□ -0.04
GTF3C4-201ENST00000372146 CBR1P16152 277 aa14.82□□□□□ -0.04
GTF3C4-201ENST00000372146 ACY1Q03154 408 aa14.82□□□□□ -0.04
GTF3C4-201ENST00000372146 TROAPQ12815 778 aa14.82□□□□□ -0.04
GTF3C4-201ENST00000372146 ZDHHC20Q5W0Z9 365 aa14.82□□□□□ -0.04
GTF3C4-201ENST00000372146 OR1J4Q8NGS1 313 aa14.82□□□□□ -0.04
GTF3C4-201ENST00000372146 OR2T35Q8NGX2 323 aa14.82□□□□□ -0.04
GTF3C4-201ENST00000372146 MMP28Q9H239 520 aa14.82□□□□□ -0.04
GTF3C4-201ENST00000372146 NLKQ9UBE8 527 aa14.82□□□□□ -0.04
GTF3C4-201ENST00000372146 ATF5Q9Y2D1 282 aaPredicted RBP14.82□□□□□ -0.04
GTF3C4-201ENST00000372146 EXOSC1Q9Y3B2 195 aaKnown RBP14.82□□□□□ -0.04
GTF3C4-201ENST00000372146 PCDHGA7Q9Y5G6 932 aa14.82□□□□□ -0.04
GTF3C4-201ENST00000372146 PIGBOS1A0A0B4J2F0 54 aa14.82□□□□□ -0.04
GTF3C4-201ENST00000372146 H3BRB1 525 aa14.82□□□□□ -0.04
GTF3C4-201ENST00000372146 SCGB2A1O75556 95 aa14.82□□□□□ -0.04
GTF3C4-201ENST00000372146 RPS14P62263 151 aaKnown RBP14.82□□□□□ -0.04
GTF3C4-201ENST00000372146 ARHGAP11BQ3KRB8 267 aa14.82□□□□□ -0.04
GTF3C4-201ENST00000372146 ZNF648Q5T619 568 aaPredicted RBP14.82□□□□□ -0.04
GTF3C4-201ENST00000372146 TMEM198Q66K66 360 aa14.82□□□□□ -0.04
GTF3C4-201ENST00000372146 STYXQ8WUJ0 223 aa14.82□□□□□ -0.04
GTF3C4-201ENST00000372146 ALG3Q92685 438 aa14.82□□□□□ -0.04
GTF3C4-201ENST00000372146 DPP7Q9UHL4 492 aa14.82□□□□□ -0.04
GTF3C4-201ENST00000372146 DLGAP4Q9Y2H0 992 aa14.82□□□□□ -0.04
GTF3C4-201ENST00000372146 RECQL4O94761 1208 aa14.82□□□□□ -0.04
GTF3C4-201ENST00000372146 TGM4P49221 684 aa14.82□□□□□ -0.04
GTF3C4-201ENST00000372146 PLA2G16P53816 162 aa14.82□□□□□ -0.04
GTF3C4-201ENST00000372146 HNRNPKP61978 463 aaKnown RBP eCLIP14.82□□□□□ -0.04
GTF3C4-201ENST00000372146 RBM39Q14498 530 aaKnown RBP14.82□□□□□ -0.04
GTF3C4-201ENST00000372146 PNCKQ6P2M8 343 aa14.82□□□□□ -0.04
GTF3C4-201ENST00000372146 ASB7Q9H672 318 aa14.82□□□□□ -0.04
GTF3C4-201ENST00000372146 PPRC1Q5VV67 1664 aaKnown RBP14.82□□□□□ -0.04
GTF3C4-201ENST00000372146 DGKQP52824 942 aa14.82□□□□□ -0.04
GTF3C4-201ENST00000372146 TATDN1Q6P1N9 297 aa14.82□□□□□ -0.04
GTF3C4-201ENST00000372146 OR10T2Q8NGX3 314 aa14.82□□□□□ -0.04
GTF3C4-201ENST00000372146 MAPKAP1Q9BPZ7 522 aa14.82□□□□□ -0.04
GTF3C4-201ENST00000372146 HRH4Q9H3N8 390 aa14.82□□□□□ -0.04
GTF3C4-201ENST00000372146 UBE2J1Q9Y385 318 aaPredicted RBP14.82□□□□□ -0.04
GTF3C4-201ENST00000372146 LSM5Q9Y4Y9 91 aaKnown RBP14.82□□□□□ -0.04
GTF3C4-201ENST00000372146 SNX10Q9Y5X0 201 aa14.82□□□□□ -0.04
GTF3C4-201ENST00000372146 MYOCQ99972 504 aa14.82□□□□□ -0.04
GTF3C4-201ENST00000372146 SLC38A1Q9H2H9 487 aa14.82□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 64.8 ms