RNA–Protein interactions for RNA: ENST00000371820.3

COL5A1-202, Transcript of collagen type V alpha 1 chain, humanhuman

TSL 2

Gene COL5A1, Length 628 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A1-202ENST00000371820 CA5AP35218 305 aa9.97□□□□□ -0.81
COL5A1-202ENST00000371820 ARL4DP49703 201 aa9.97□□□□□ -0.81
COL5A1-202ENST00000371820 PLOD1Q02809 727 aaPredicted RBP9.97□□□□□ -0.81
COL5A1-202ENST00000371820 LCP2Q13094 533 aa9.97□□□□□ -0.81
COL5A1-202ENST00000371820 MAD2L1Q13257 205 aaPredicted RBP9.97□□□□□ -0.81
COL5A1-202ENST00000371820 APOFQ13790 326 aa9.97□□□□□ -0.81
COL5A1-202ENST00000371820 IL11RAQ14626 422 aa9.97□□□□□ -0.81
COL5A1-202ENST00000371820 TYSND1Q2T9J0 566 aa9.97□□□□□ -0.81
COL5A1-202ENST00000371820 IL23RQ5VWK5 629 aa9.97□□□□□ -0.81
COL5A1-202ENST00000371820 KANK2Q63ZY3 851 aa9.97□□□□□ -0.81
COL5A1-202ENST00000371820 TMEM198Q66K66 360 aa9.97□□□□□ -0.81
COL5A1-202ENST00000371820 PAOXQ6QHF9 649 aa9.97□□□□□ -0.81
COL5A1-202ENST00000371820 CERS6Q6ZMG9 384 aa9.97□□□□□ -0.81
COL5A1-202ENST00000371820 FAM83HQ6ZRV2 1179 aaPredicted RBP9.97□□□□□ -0.81
COL5A1-202ENST00000371820 GK5Q6ZS86 529 aa9.97□□□□□ -0.81
COL5A1-202ENST00000371820 PRICKLE2Q7Z3G6 844 aa9.97□□□□□ -0.81
COL5A1-202ENST00000371820 BPHLQ86WA6 291 aaPredicted RBP9.97□□□□□ -0.81
COL5A1-202ENST00000371820 NLGN4XQ8N0W4 816 aa9.97□□□□□ -0.81
COL5A1-202ENST00000371820 GALNT4Q8N4A0 578 aa9.97□□□□□ -0.81
COL5A1-202ENST00000371820 NLGN4YQ8NFZ3 816 aaPredicted RBP9.97□□□□□ -0.81
COL5A1-202ENST00000371820 OR13J1Q8NGT2 312 aa9.97□□□□□ -0.81
COL5A1-202ENST00000371820 RSC1A1Q92681 617 aa9.97□□□□□ -0.81
COL5A1-202ENST00000371820 NKD1Q969G9 470 aa9.97□□□□□ -0.81
COL5A1-202ENST00000371820 COL26A1Q96A83 441 aa9.97□□□□□ -0.81
COL5A1-202ENST00000371820 PHF21BQ96EK2 531 aa9.97□□□□□ -0.81
COL5A1-202ENST00000371820 RMND5BQ96G75 393 aaPredicted RBP9.97□□□□□ -0.81
COL5A1-202ENST00000371820 PDLIM5Q96HC4 596 aaKnown RBP9.97□□□□□ -0.81
COL5A1-202ENST00000371820 RDH12Q96NR8 316 aa9.97□□□□□ -0.81
COL5A1-202ENST00000371820 BIRC8Q96P09 236 aa9.97□□□□□ -0.81
COL5A1-202ENST00000371820 SH3GL1Q99961 368 aa9.97□□□□□ -0.81
COL5A1-202ENST00000371820 ARHGAP9Q9BRR9 750 aa9.97□□□□□ -0.81
COL5A1-202ENST00000371820 TMEM79Q9BSE2 394 aa9.97□□□□□ -0.81
COL5A1-202ENST00000371820 BDH2Q9BUT1 245 aa9.97□□□□□ -0.81
COL5A1-202ENST00000371820 KIR3DX1Q9H7L2 352 aa9.97□□□□□ -0.81
COL5A1-202ENST00000371820 COQ10BQ9H8M1 238 aa9.97□□□□□ -0.81
COL5A1-202ENST00000371820 AKTIPQ9H8T0 292 aa9.97□□□□□ -0.81
COL5A1-202ENST00000371820 SDR39U1Q9NRG7 319 aaPredicted RBP9.97□□□□□ -0.81
COL5A1-202ENST00000371820 STARD5Q9NSY2 213 aa9.97□□□□□ -0.81
COL5A1-202ENST00000371820 SIDT1Q9NXL6 827 aaKnown RBP9.97□□□□□ -0.81
COL5A1-202ENST00000371820 SLC2A6Q9UGQ3 507 aa9.97□□□□□ -0.81
COL5A1-202ENST00000371820 POLG2Q9UHN1 485 aa9.97□□□□□ -0.81
COL5A1-202ENST00000371820 TMEM184BQ9Y519 407 aaPredicted RBP9.97□□□□□ -0.81
COL5A1-202ENST00000371820 SNX13Q9Y5W8 968 aa9.97□□□□□ -0.81
COL5A1-202ENST00000371820 MAST4O15021 2626 aa9.96□□□□□ -0.81
COL5A1-202ENST00000371820 UBA6A0AVT1 1052 aaPredicted RBP9.96□□□□□ -0.82
COL5A1-202ENST00000371820 OR5K3A6NET4 321 aa9.96□□□□□ -0.82
COL5A1-202ENST00000371820 TLCD2A6NGC4 264 aa9.96□□□□□ -0.82
COL5A1-202ENST00000371820 CCL22O00626 93 aa9.96□□□□□ -0.82
COL5A1-202ENST00000371820 FBP2O00757 339 aa9.96□□□□□ -0.82
COL5A1-202ENST00000371820 SGTAO43765 313 aa9.96□□□□□ -0.82
COL5A1-202ENST00000371820 STK17BO94768 372 aa9.96□□□□□ -0.82
COL5A1-202ENST00000371820 FAM87AP0C7U9 286 aa9.96□□□□□ -0.82
COL5A1-202ENST00000371820 ITGB6P18564 788 aa9.96□□□□□ -0.82
COL5A1-202ENST00000371820 HTR1EP28566 365 aa9.96□□□□□ -0.82
COL5A1-202ENST00000371820 CDK9P50750 372 aaKnown RBP9.96□□□□□ -0.82
COL5A1-202ENST00000371820 ARSDP51689 593 aa9.96□□□□□ -0.82
COL5A1-202ENST00000371820 ADARP55265 1226 aaKnown RBP9.96□□□□□ -0.82
COL5A1-202ENST00000371820 ACY1Q03154 408 aa9.96□□□□□ -0.82
COL5A1-202ENST00000371820 KCNC4Q03721 635 aa9.96□□□□□ -0.82
COL5A1-202ENST00000371820 CLCQ05315 142 aa9.96□□□□□ -0.82
COL5A1-202ENST00000371820 ABHD18Q0P651 414 aa9.96□□□□□ -0.82
COL5A1-202ENST00000371820 TBR1Q16650 682 aa9.96□□□□□ -0.82
COL5A1-202ENST00000371820 UGT3A2Q3SY77 523 aa9.96□□□□□ -0.82
COL5A1-202ENST00000371820 PDCD4Q53EL6 469 aaKnown RBP9.96□□□□□ -0.82
COL5A1-202ENST00000371820 TBCELQ5QJ74 424 aa9.96□□□□□ -0.82
COL5A1-202ENST00000371820 RBM20Q5T481 1227 aaKnown RBP9.96□□□□□ -0.82
COL5A1-202ENST00000371820 BLOC1S3Q6QNY0 202 aa9.96□□□□□ -0.82
COL5A1-202ENST00000371820 RNF165Q6ZSG1 346 aa9.96□□□□□ -0.82
COL5A1-202ENST00000371820 SATL1Q86VE3 508 aa9.96□□□□□ -0.82
COL5A1-202ENST00000371820 PTRH1Q86Y79 214 aaKnown RBP9.96□□□□□ -0.82
COL5A1-202ENST00000371820 RASGRP3Q8IV61 690 aa9.96□□□□□ -0.82
COL5A1-202ENST00000371820 CHERPQ8IWX8 916 aaKnown RBP9.96□□□□□ -0.82
COL5A1-202ENST00000371820 LILRA2Q8N149 483 aa9.96□□□□□ -0.82
COL5A1-202ENST00000371820 ESX1Q8N693 406 aa9.96□□□□□ -0.82
COL5A1-202ENST00000371820 PTGR2Q8N8N7 351 aaPredicted RBP9.96□□□□□ -0.82
COL5A1-202ENST00000371820 SIDT2Q8NBJ9 832 aaKnown RBP9.96□□□□□ -0.82
COL5A1-202ENST00000371820 PAPD5Q8NDF8 572 aaKnown RBP9.96□□□□□ -0.82
COL5A1-202ENST00000371820 ZNF420Q8TAQ5 688 aaPredicted RBP9.96□□□□□ -0.82
COL5A1-202ENST00000371820 TWIST2Q8WVJ9 160 aa9.96□□□□□ -0.82
COL5A1-202ENST00000371820 KLHL6Q8WZ60 621 aa9.96□□□□□ -0.82
COL5A1-202ENST00000371820 TUBGCP3Q96CW5 907 aa9.96□□□□□ -0.82
COL5A1-202ENST00000371820 LRRC58Q96CX6 371 aa9.96□□□□□ -0.82
COL5A1-202ENST00000371820 MPP4Q96JB8 637 aa9.96□□□□□ -0.82
COL5A1-202ENST00000371820 PPP1R36Q96LQ0 422 aa9.96□□□□□ -0.82
COL5A1-202ENST00000371820 FCRL4Q96PJ5 515 aa9.96□□□□□ -0.82
COL5A1-202ENST00000371820 OR6C1Q96RD1 312 aa9.96□□□□□ -0.82
COL5A1-202ENST00000371820 INSM2Q96T92 566 aaPredicted RBP9.96□□□□□ -0.82
COL5A1-202ENST00000371820 PRPF18Q99633 342 aaKnown RBP9.96□□□□□ -0.82
COL5A1-202ENST00000371820 OLFM1Q99784 485 aa9.96□□□□□ -0.82
COL5A1-202ENST00000371820 CTRCQ99895 268 aa9.96□□□□□ -0.82
COL5A1-202ENST00000371820 TUBA1CQ9BQE3 449 aa9.96□□□□□ -0.82
COL5A1-202ENST00000371820 FAM117AQ9C073 453 aa9.96□□□□□ -0.82
COL5A1-202ENST00000371820 ALG9Q9H6U8 611 aa9.96□□□□□ -0.82
COL5A1-202ENST00000371820 MVB12BQ9H7P6 319 aa9.96□□□□□ -0.82
COL5A1-202ENST00000371820 GPN2Q9H9Y4 310 aaPredicted RBP9.96□□□□□ -0.82
COL5A1-202ENST00000371820 PDE7BQ9NP56 450 aa9.96□□□□□ -0.82
COL5A1-202ENST00000371820 MID1IP1Q9NPA3 183 aa9.96□□□□□ -0.82
COL5A1-202ENST00000371820 HRASLS2Q9NWW9 162 aa9.96□□□□□ -0.82
COL5A1-202ENST00000371820 RSL24D1Q9UHA3 163 aaKnown RBP9.96□□□□□ -0.82
COL5A1-202ENST00000371820 RNF112Q9ULX5 631 aa9.96□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms