RNA–Protein interactions for RNA: ENST00000371122.8

SMARCA1-202, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SMARCA1, Length 4,099 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA1-202ENST00000371122 NANOGNBQ7Z5D8 188 aa8.78□□□□□ -1
SMARCA1-202ENST00000371122 LRRTM4Q86VH4 590 aa8.78□□□□□ -1
SMARCA1-202ENST00000371122 C2orf15Q8WU43 125 aaKnown RBP8.78□□□□□ -1
SMARCA1-202ENST00000371122 ZNF354BQ96LW1 612 aa8.78□□□□□ -1
SMARCA1-202ENST00000371122 FEVQ99581 238 aa8.78□□□□□ -1
SMARCA1-202ENST00000371122 ZSCAN5AQ9BUG6 496 aa8.78□□□□□ -1
SMARCA1-202ENST00000371122 ZNF282Q9UDV7 671 aaPredicted RBP8.78□□□□□ -1
SMARCA1-202ENST00000371122 ADAM30Q9UKF2 790 aa8.78□□□□□ -1
SMARCA1-202ENST00000371122 A0A1B0GTW7 788 aa8.77□□□□□ -1
SMARCA1-202ENST00000371122 URADA6NGE7 173 aa8.77□□□□□ -1
SMARCA1-202ENST00000371122 MCIDASD6RGH6 385 aa8.77□□□□□ -1
SMARCA1-202ENST00000371122 PLOD2O00469 737 aa8.77□□□□□ -1
SMARCA1-202ENST00000371122 CSN2P05814 226 aa8.77□□□□□ -1
SMARCA1-202ENST00000371122 FSHRP23945 695 aa8.77□□□□□ -1
SMARCA1-202ENST00000371122 ACRV1P26436 265 aa8.77□□□□□ -1
SMARCA1-202ENST00000371122 AKT2P31751 481 aa8.77□□□□□ -1
SMARCA1-202ENST00000371122 CTSCP53634 463 aa8.77□□□□□ -1
SMARCA1-202ENST00000371122 AP1S2P56377 157 aa8.77□□□□□ -1
SMARCA1-202ENST00000371122 TBPL1P62380 186 aa8.77□□□□□ -1
SMARCA1-202ENST00000371122 ABATP80404 500 aa8.77□□□□□ -1
SMARCA1-202ENST00000371122 PON2Q15165 354 aa8.77□□□□□ -1
SMARCA1-202ENST00000371122 NADSYN1Q6IA69 706 aa8.77□□□□□ -1
SMARCA1-202ENST00000371122 CNKSR3Q6P9H4 555 aa8.77□□□□□ -1
SMARCA1-202ENST00000371122 ZNF655Q8N720 491 aaPredicted RBP8.77□□□□□ -1
SMARCA1-202ENST00000371122 OR8K3Q8NH51 312 aa8.77□□□□□ -1
SMARCA1-202ENST00000371122 THAP3Q8WTV1 239 aaPredicted RBP8.77□□□□□ -1
SMARCA1-202ENST00000371122 RAB2BQ8WUD1 216 aa8.77□□□□□ -1
SMARCA1-202ENST00000371122 JSRP1Q96MG2 331 aaPredicted RBP8.77□□□□□ -1
SMARCA1-202ENST00000371122 ZNF641Q96N77 438 aaPredicted RBP8.77□□□□□ -1
SMARCA1-202ENST00000371122 CHIAQ9BZP6 476 aa8.77□□□□□ -1
SMARCA1-202ENST00000371122 GPC6Q9Y625 555 aaPredicted RBP8.77□□□□□ -1
SMARCA1-202ENST00000371122 RIF1Q5UIP0 2472 aaKnown RBP8.77□□□□□ -1.01
SMARCA1-202ENST00000371122 SRCP12931 536 aa8.77□□□□□ -1.01
SMARCA1-202ENST00000371122 IFI30P13284 250 aa8.77□□□□□ -1.01
SMARCA1-202ENST00000371122 CCR8P51685 355 aa8.77□□□□□ -1.01
SMARCA1-202ENST00000371122 RPP38P78345 283 aaKnown RBP8.77□□□□□ -1.01
SMARCA1-202ENST00000371122 PRR5P85299 388 aa8.77□□□□□ -1.01
SMARCA1-202ENST00000371122 ILF2Q12905 390 aaKnown RBP8.77□□□□□ -1.01
SMARCA1-202ENST00000371122 PMS2P3Q13401 168 aa8.77□□□□□ -1.01
SMARCA1-202ENST00000371122 TOR1AIP1Q5JTV8 583 aa8.77□□□□□ -1.01
SMARCA1-202ENST00000371122 C6orf183Q5T699 404 aa8.77□□□□□ -1.01
SMARCA1-202ENST00000371122 ZC3H14Q6PJT7 736 aaKnown RBP8.77□□□□□ -1.01
SMARCA1-202ENST00000371122 OLIG3Q7RTU3 272 aa8.77□□□□□ -1.01
SMARCA1-202ENST00000371122 ADGRD2Q7Z7M1 963 aa8.77□□□□□ -1.01
SMARCA1-202ENST00000371122 LSMEM2Q8N112 164 aa8.77□□□□□ -1.01
SMARCA1-202ENST00000371122 LILRA2Q8N149 483 aa8.77□□□□□ -1.01
SMARCA1-202ENST00000371122 SLC5A11Q8WWX8 675 aa8.77□□□□□ -1.01
SMARCA1-202ENST00000371122 CLSTN3Q9BQT9 956 aa8.77□□□□□ -1.01
SMARCA1-202ENST00000371122 EFCAB11Q9BUY7 163 aa8.77□□□□□ -1.01
SMARCA1-202ENST00000371122 NAA50Q9GZZ1 169 aaKnown RBP8.77□□□□□ -1.01
SMARCA1-202ENST00000371122 IL21RQ9HBE5 538 aa8.77□□□□□ -1.01
SMARCA1-202ENST00000371122 ERVW-1Q9UQF0 538 aa8.77□□□□□ -1.01
SMARCA1-202ENST00000371122 IRAK3Q9Y616 596 aa8.77□□□□□ -1.01
SMARCA1-202ENST00000371122 FAM86C2PA6NEL3 165 aa8.77□□□□□ -1.01
SMARCA1-202ENST00000371122 FABP12A6NFH5 140 aa8.77□□□□□ -1.01
SMARCA1-202ENST00000371122 M0QZQ0 153 aa8.77□□□□□ -1.01
SMARCA1-202ENST00000371122 STX16O14662 325 aa8.77□□□□□ -1.01
SMARCA1-202ENST00000371122 REM1O75628 298 aa8.77□□□□□ -1.01
SMARCA1-202ENST00000371122 CCNDBP1O95273 360 aa8.77□□□□□ -1.01
SMARCA1-202ENST00000371122 B3GALT4O96024 378 aa8.77□□□□□ -1.01
SMARCA1-202ENST00000371122 MYL9P24844 172 aa8.77□□□□□ -1.01
SMARCA1-202ENST00000371122 RFC2P35250 354 aa8.77□□□□□ -1.01
SMARCA1-202ENST00000371122 NKX2-5P52952 324 aaPredicted RBP8.77□□□□□ -1.01
SMARCA1-202ENST00000371122 TXNL4AP83876 142 aaKnown RBP8.77□□□□□ -1.01
SMARCA1-202ENST00000371122 ARF5P84085 180 aa8.77□□□□□ -1.01
SMARCA1-202ENST00000371122 RING1Q06587 406 aa8.77□□□□□ -1.01
SMARCA1-202ENST00000371122 ST3GAL4Q11206 333 aa8.77□□□□□ -1.01
SMARCA1-202ENST00000371122 TEAD4Q15561 434 aa8.77□□□□□ -1.01
SMARCA1-202ENST00000371122 SMN1Q16637 294 aaKnown RBP8.77□□□□□ -1.01
SMARCA1-202ENST00000371122 HYAL4Q2M3T9 481 aa8.77□□□□□ -1.01
SMARCA1-202ENST00000371122 DEFB110Q30KQ9 67 aa8.77□□□□□ -1.01
SMARCA1-202ENST00000371122 NDUFAF6Q330K2 333 aa8.77□□□□□ -1.01
SMARCA1-202ENST00000371122 ZNF311Q5JNZ3 666 aa8.77□□□□□ -1.01
SMARCA1-202ENST00000371122 RPS26P11Q5JNZ5 115 aaPredicted RBP8.77□□□□□ -1.01
SMARCA1-202ENST00000371122 C6orf141Q5SZD1 244 aa8.77□□□□□ -1.01
SMARCA1-202ENST00000371122 SLC22A16Q86VW1 577 aa8.77□□□□□ -1.01
SMARCA1-202ENST00000371122 NUDT13Q86X67 352 aa8.77□□□□□ -1.01
SMARCA1-202ENST00000371122 OR51L1Q8NGJ5 315 aa8.77□□□□□ -1.01
SMARCA1-202ENST00000371122 OR8K5Q8NH50 307 aa8.77□□□□□ -1.01
SMARCA1-202ENST00000371122 PMM1Q92871 262 aa8.77□□□□□ -1.01
SMARCA1-202ENST00000371122 SLC38A3Q99624 504 aa8.77□□□□□ -1.01
SMARCA1-202ENST00000371122 TMEM27Q9HBJ8 222 aa8.77□□□□□ -1.01
SMARCA1-202ENST00000371122 ZSCAN32Q9NX65 697 aa8.77□□□□□ -1.01
SMARCA1-202ENST00000371122 NLGN3Q9NZ94 848 aa8.77□□□□□ -1.01
SMARCA1-202ENST00000371122 MKLN1Q9UL63 735 aa8.77□□□□□ -1.01
SMARCA1-202ENST00000371122 GPR52Q9Y2T5 361 aa8.77□□□□□ -1.01
SMARCA1-202ENST00000371122 SLC45A1Q9Y2W3 748 aa8.77□□□□□ -1.01
SMARCA1-202ENST00000371122 I6L893 689 aaPredicted RBP8.76□□□□□ -1.01
SMARCA1-202ENST00000371122 DBIP07108 87 aaKnown RBP8.76□□□□□ -1.01
SMARCA1-202ENST00000371122 H1F0P07305 194 aaKnown RBP8.76□□□□□ -1.01
SMARCA1-202ENST00000371122 SLC10A3P09131 477 aa8.76□□□□□ -1.01
SMARCA1-202ENST00000371122 CSNK2A2P19784 350 aaPredicted RBP8.76□□□□□ -1.01
SMARCA1-202ENST00000371122 ARRB2P32121 409 aa8.76□□□□□ -1.01
SMARCA1-202ENST00000371122 GJA8P48165 433 aa8.76□□□□□ -1.01
SMARCA1-202ENST00000371122 UGT8Q16880 541 aa8.76□□□□□ -1.01
SMARCA1-202ENST00000371122 TLDC1Q6P9B6 456 aa8.76□□□□□ -1.01
SMARCA1-202ENST00000371122 RSPO2Q6UXX9 243 aaPredicted RBP8.76□□□□□ -1.01
SMARCA1-202ENST00000371122 AKAP14Q86UN6 197 aa8.76□□□□□ -1.01
SMARCA1-202ENST00000371122 SVOPLQ8N434 492 aa8.76□□□□□ -1.01
SMARCA1-202ENST00000371122 IQCF1Q8N6M8 205 aa8.76□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 60.9 ms