RNA–Protein interactions for RNA: ENST00000368694.7

CHTOP-204, Transcript of chromatin target of PRMT1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CHTOP, Length 2,096 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHTOP-204ENST00000368694 TRIM38O00635 465 aa18.53■□□□□ 0.56
CHTOP-204ENST00000368694 IL3P08700 152 aa18.53■□□□□ 0.56
CHTOP-204ENST00000368694 EPHA8P29322 1005 aaPredicted RBP18.53■□□□□ 0.56
CHTOP-204ENST00000368694 DUOXA1Q1HG43 343 aa18.53■□□□□ 0.56
CHTOP-204ENST00000368694 DLEU7Q6UYE1 221 aa18.53■□□□□ 0.56
CHTOP-204ENST00000368694 VN1R4Q7Z5H5 301 aa18.53■□□□□ 0.56
CHTOP-204ENST00000368694 UBE3DQ7Z6J8 389 aa18.53■□□□□ 0.56
CHTOP-204ENST00000368694 GATAD2AQ86YP4 633 aa18.53■□□□□ 0.56
CHTOP-204ENST00000368694 KIAA2013Q8IYS2 634 aa18.53■□□□□ 0.56
CHTOP-204ENST00000368694 ITCHQ96J02 903 aa18.53■□□□□ 0.56
CHTOP-204ENST00000368694 KCNC2Q96PR1 638 aa18.53■□□□□ 0.56
CHTOP-204ENST00000368694 DUSP26Q9BV47 211 aa18.53■□□□□ 0.56
CHTOP-204ENST00000368694 ABCG4Q9H172 646 aa18.53■□□□□ 0.56
CHTOP-204ENST00000368694 SEMA6CQ9H3T2 930 aa18.53■□□□□ 0.56
CHTOP-204ENST00000368694 REEP4Q9H6H4 257 aa18.53■□□□□ 0.56
CHTOP-204ENST00000368694 KLK4Q9Y5K2 254 aa18.53■□□□□ 0.56
CHTOP-204ENST00000368694 KLHL18O94889 574 aa18.52■□□□□ 0.56
CHTOP-204ENST00000368694 B3GALT4O96024 378 aa18.52■□□□□ 0.56
CHTOP-204ENST00000368694 SP9P0CG40 484 aa18.52■□□□□ 0.56
CHTOP-204ENST00000368694 LAMP1P11279 417 aa18.52■□□□□ 0.56
CHTOP-204ENST00000368694 PIM1P11309 404 aaPredicted RBP18.52■□□□□ 0.56
CHTOP-204ENST00000368694 AVPR2P30518 371 aa18.52■□□□□ 0.56
CHTOP-204ENST00000368694 MC1RQ01726 317 aa18.52■□□□□ 0.56
CHTOP-204ENST00000368694 ANGPT1Q15389 498 aa18.52■□□□□ 0.56
CHTOP-204ENST00000368694 LPAL2Q16609 132 aa18.52■□□□□ 0.56
CHTOP-204ENST00000368694 HLA-BQ31612 363 aa18.52■□□□□ 0.56
CHTOP-204ENST00000368694 ADPRMQ3LIE5 342 aa18.52■□□□□ 0.56
CHTOP-204ENST00000368694 R3HCC1LQ7Z5L2 792 aaKnown RBP18.52■□□□□ 0.56
CHTOP-204ENST00000368694 SLC35F3Q8IY50 421 aa18.52■□□□□ 0.56
CHTOP-204ENST00000368694 OR2L5Q8NG80 312 aa18.52■□□□□ 0.56
CHTOP-204ENST00000368694 OR8J2Q8NGG1 315 aa18.52■□□□□ 0.56
CHTOP-204ENST00000368694 PUM2Q8TB72 1066 aaKnown RBP eCLIP18.52■□□□□ 0.563e-11■■□□□ 12.7
CHTOP-204ENST00000368694 RERGQ96A58 199 aaPredicted RBP18.52■□□□□ 0.56
CHTOP-204ENST00000368694 OR2A5Q96R48 311 aa18.52■□□□□ 0.56
CHTOP-204ENST00000368694 CGREF1Q99674 301 aa18.52■□□□□ 0.56
CHTOP-204ENST00000368694 ABCD2Q9UBJ2 740 aa18.52■□□□□ 0.56
CHTOP-204ENST00000368694 ADAM29Q9UKF5 820 aa18.52■□□□□ 0.56
CHTOP-204ENST00000368694 PRORSD1PA6NEY8 169 aa18.51■□□□□ 0.55
CHTOP-204ENST00000368694 NME4O00746 187 aa18.51■□□□□ 0.55
CHTOP-204ENST00000368694 ST6GAL1P15907 406 aa18.51■□□□□ 0.55
CHTOP-204ENST00000368694 ZNF528Q3MIS6 628 aa18.51■□□□□ 0.55
CHTOP-204ENST00000368694 RABL3Q5HYI8 236 aa18.51■□□□□ 0.55
CHTOP-204ENST00000368694 PEAR1Q5VY43 1037 aaPredicted RBP18.51■□□□□ 0.55
CHTOP-204ENST00000368694 FAM71E1Q6IPT2 247 aa18.51■□□□□ 0.55
CHTOP-204ENST00000368694 NANOGP8Q6NSW7 305 aa18.51■□□□□ 0.55
CHTOP-204ENST00000368694 IKBIPQ70UQ0 350 aa18.51■□□□□ 0.55
CHTOP-204ENST00000368694 SLC15A3Q8IY34 581 aa18.51■□□□□ 0.55
CHTOP-204ENST00000368694 KCT2Q8NC54 265 aa18.51■□□□□ 0.55
CHTOP-204ENST00000368694 SRFBP1Q8NEF9 429 aaKnown RBP18.51■□□□□ 0.55
CHTOP-204ENST00000368694 STMN2Q93045 179 aa18.51■□□□□ 0.55
CHTOP-204ENST00000368694 AHCYL2Q96HN2 611 aaKnown RBP18.51■□□□□ 0.55
CHTOP-204ENST00000368694 TEFMQ96QE5 360 aaKnown RBP18.51■□□□□ 0.55
CHTOP-204ENST00000368694 SLC6A16Q9GZN6 736 aa18.51■□□□□ 0.55
CHTOP-204ENST00000368694 NANOGQ9H9S0 305 aa18.51■□□□□ 0.55
CHTOP-204ENST00000368694 MIEF1Q9NQG6 463 aa18.51■□□□□ 0.55
CHTOP-204ENST00000368694 FAM120CQ9NX05 1096 aaKnown RBP18.51■□□□□ 0.55
CHTOP-204ENST00000368694 VAPAQ9P0L0 249 aa18.51■□□□□ 0.55
CHTOP-204ENST00000368694 NIPSNAP3AQ9UFN0 247 aaPredicted RBP18.51■□□□□ 0.55
CHTOP-204ENST00000368694 PILRAQ9UKJ1 303 aa18.51■□□□□ 0.55
CHTOP-204ENST00000368694 BTBD3Q9Y2F9 522 aa18.51■□□□□ 0.55
CHTOP-204ENST00000368694 C15orf38-AP3S2A0A0A6YYH1 394 aa18.51■□□□□ 0.55
CHTOP-204ENST00000368694 A0A1B0GTQ1 180 aa18.51■□□□□ 0.55
CHTOP-204ENST00000368694 C4orf51C9J302 202 aa18.51■□□□□ 0.55
CHTOP-204ENST00000368694 RFXANKO14593 260 aa18.51■□□□□ 0.55
CHTOP-204ENST00000368694 SMNDC1O75940 238 aaKnown RBP eCLIP18.51■□□□□ 0.55
CHTOP-204ENST00000368694 FURINP09958 794 aa18.51■□□□□ 0.55
CHTOP-204ENST00000368694 GIMD1P0DJR0 217 aa18.51■□□□□ 0.55
CHTOP-204ENST00000368694 HOXD12P35452 270 aa18.51■□□□□ 0.55
CHTOP-204ENST00000368694 RPL3P39023 403 aaKnown RBP18.51■□□□□ 0.55
CHTOP-204ENST00000368694 RAB8AP61006 207 aa18.51■□□□□ 0.55
CHTOP-204ENST00000368694 ACTR3P61158 418 aa18.51■□□□□ 0.55
CHTOP-204ENST00000368694 FRMPD2BQ6IN97 320 aa18.51■□□□□ 0.55
CHTOP-204ENST00000368694 FAM92BQ6ZTR7 304 aa18.51■□□□□ 0.55
CHTOP-204ENST00000368694 MSANTD1Q6ZTZ1 278 aa18.51■□□□□ 0.55
CHTOP-204ENST00000368694 ARPINQ7Z6K5 226 aa18.51■□□□□ 0.55
CHTOP-204ENST00000368694 TMEM125Q96AQ2 219 aa18.51■□□□□ 0.55
CHTOP-204ENST00000368694 PPCDCQ96CD2 204 aa18.51■□□□□ 0.55
CHTOP-204ENST00000368694 DDX31Q9H8H2 851 aaKnown RBP18.51■□□□□ 0.55
CHTOP-204ENST00000368694 ATAD3AQ9NVI7 634 aa18.51■□□□□ 0.55
CHTOP-204ENST00000368694 CMTM6Q9NX76 183 aa18.51■□□□□ 0.55
CHTOP-204ENST00000368694 EXO1Q9UQ84 846 aaKnown RBP18.51■□□□□ 0.55
CHTOP-204ENST00000368694 PCDHA9Q9Y5H5 950 aa18.51■□□□□ 0.55
CHTOP-204ENST00000368694 CABIN1Q9Y6J0 2220 aa18.51■□□□□ 0.55
CHTOP-204ENST00000368694 DMDP11532 3685 aa18.5■□□□□ 0.55
CHTOP-204ENST00000368694 PATE3B3GLJ2 98 aa18.5■□□□□ 0.55
CHTOP-204ENST00000368694 NUDT21O43809 227 aaKnown RBP18.5■□□□□ 0.55
CHTOP-204ENST00000368694 DFNA5O60443 496 aa18.5■□□□□ 0.55
CHTOP-204ENST00000368694 EIF2S1P05198 315 aaKnown RBP18.5■□□□□ 0.55
CHTOP-204ENST00000368694 ATXN3P54252 364 aaPredicted RBP18.5■□□□□ 0.55
CHTOP-204ENST00000368694 TGM3Q08188 693 aa18.5■□□□□ 0.55
CHTOP-204ENST00000368694 ABHD17CQ6PCB6 329 aa18.5■□□□□ 0.55
CHTOP-204ENST00000368694 ZNF793Q6ZN11 406 aa18.5■□□□□ 0.55
CHTOP-204ENST00000368694 CAMKMTQ7Z624 323 aa18.5■□□□□ 0.55
CHTOP-204ENST00000368694 RABEPKQ7Z6M1 372 aa18.5■□□□□ 0.55
CHTOP-204ENST00000368694 C19orf47Q8N9M1 422 aaKnown RBP18.5■□□□□ 0.55
CHTOP-204ENST00000368694 ZBTB44Q8NCP5 570 aa18.5■□□□□ 0.55
CHTOP-204ENST00000368694 HIPK4Q8NE63 616 aa18.5■□□□□ 0.55
CHTOP-204ENST00000368694 VPS37AQ8NEZ2 397 aa18.5■□□□□ 0.55
CHTOP-204ENST00000368694 OR8K5Q8NH50 307 aa18.5■□□□□ 0.55
CHTOP-204ENST00000368694 CEP76Q8TAP6 659 aa18.5■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 46.3 ms