RNA–Protein interactions for RNA: ENST00000368378.7

THBS3-201, Transcript of thrombospondin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene THBS3, Length 3,145 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
THBS3-201ENST00000368378 DNAJA1P31689 397 aaKnown RBP8.54□□□□□ -1.04
THBS3-201ENST00000368378 CENPAP49450 140 aa8.54□□□□□ -1.04
THBS3-201ENST00000368378 CTSCP53634 463 aa8.54□□□□□ -1.04
THBS3-201ENST00000368378 HSPB3Q12988 150 aa8.54□□□□□ -1.04
THBS3-201ENST00000368378 ZNF404Q494X3 552 aa8.54□□□□□ -1.04
THBS3-201ENST00000368378 ATAD3BQ5T9A4 648 aa8.54□□□□□ -1.04
THBS3-201ENST00000368378 SDE2Q6IQ49 451 aa8.54□□□□□ -1.04
THBS3-201ENST00000368378 FBXO46Q6PJ61 603 aaPredicted RBP8.54□□□□□ -1.04
THBS3-201ENST00000368378 SREK1IP1Q8N9Q2 155 aaPredicted RBP8.54□□□□□ -1.04
THBS3-201ENST00000368378 TMEM169Q96HH4 297 aa8.54□□□□□ -1.04
THBS3-201ENST00000368378 CXXC1Q9P0U4 656 aaPredicted RBP8.54□□□□□ -1.04
THBS3-201ENST00000368378 VPS29Q9UBQ0 182 aa8.54□□□□□ -1.04
THBS3-201ENST00000368378 PCDHB1Q9Y5F3 818 aa8.54□□□□□ -1.04
THBS3-201ENST00000368378 URB1O60287 2271 aaKnown RBP8.54□□□□□ -1.04
THBS3-201ENST00000368378 PLXNA4Q9HCM2 1894 aa8.54□□□□□ -1.04
THBS3-201ENST00000368378 SCN3AQ9NY46 2000 aa8.54□□□□□ -1.04
THBS3-201ENST00000368378 A0A1B0GVC2 190 aa8.54□□□□□ -1.04
THBS3-201ENST00000368378 A6NIN4 97 aa8.54□□□□□ -1.04
THBS3-201ENST00000368378 ASNA1O43681 348 aa8.54□□□□□ -1.04
THBS3-201ENST00000368378 ERN1O75460 977 aaKnown RBP8.54□□□□□ -1.04
THBS3-201ENST00000368378 WBP4O75554 376 aaKnown RBP8.54□□□□□ -1.04
THBS3-201ENST00000368378 CCNDBP1O95273 360 aa8.54□□□□□ -1.04
THBS3-201ENST00000368378 NTN1O95631 604 aa8.54□□□□□ -1.04
THBS3-201ENST00000368378 PAHP00439 452 aa8.54□□□□□ -1.04
THBS3-201ENST00000368378 GLULP15104 373 aa8.54□□□□□ -1.04
THBS3-201ENST00000368378 METAP1P53582 386 aa8.54□□□□□ -1.04
THBS3-201ENST00000368378 RACK1P63244 317 aaKnown RBP8.54□□□□□ -1.04
THBS3-201ENST00000368378 ILF2Q12905 390 aaKnown RBP8.54□□□□□ -1.04
THBS3-201ENST00000368378 BCL2A1Q16548 175 aa8.54□□□□□ -1.04
THBS3-201ENST00000368378 HIST2H2ACQ16777 129 aaPredicted RBP8.54□□□□□ -1.04
THBS3-201ENST00000368378 INO80DQ53TQ3 878 aaPredicted RBP8.54□□□□□ -1.04
THBS3-201ENST00000368378 TMC5Q6UXY8 1006 aa8.54□□□□□ -1.04
THBS3-201ENST00000368378 VASH1Q7L8A9 365 aaPredicted RBP8.54□□□□□ -1.04
THBS3-201ENST00000368378 AKAP14Q86UN6 197 aa8.54□□□□□ -1.04
THBS3-201ENST00000368378 RBM45Q8IUH3 476 aaKnown RBP8.54□□□□□ -1.04
THBS3-201ENST00000368378 CFAP206Q8IYR0 622 aa8.54□□□□□ -1.04
THBS3-201ENST00000368378 ZNF675Q8TD23 568 aa8.54□□□□□ -1.04
THBS3-201ENST00000368378 ING5Q8WYH8 240 aa8.54□□□□□ -1.04
THBS3-201ENST00000368378 TP53INP1Q96A56 240 aa8.54□□□□□ -1.04
THBS3-201ENST00000368378 TMEM159Q96B96 161 aa8.54□□□□□ -1.04
THBS3-201ENST00000368378 CASD1Q96PB1 797 aa8.54□□□□□ -1.04
THBS3-201ENST00000368378 NEDD4LQ96PU5 975 aa8.54□□□□□ -1.04
THBS3-201ENST00000368378 TUBA1CQ9BQE3 449 aa8.54□□□□□ -1.04
THBS3-201ENST00000368378 CLSTN3Q9BQT9 956 aa8.54□□□□□ -1.04
THBS3-201ENST00000368378 RIOK2Q9BVS4 552 aaKnown RBP8.54□□□□□ -1.04
THBS3-201ENST00000368378 YTHDF1Q9BYJ9 559 aaKnown RBP8.54□□□□□ -1.04
THBS3-201ENST00000368378 MMP28Q9H239 520 aa8.54□□□□□ -1.04
THBS3-201ENST00000368378 ZNF556Q9HAH1 456 aa8.54□□□□□ -1.04
THBS3-201ENST00000368378 IL1RAPQ9NPH3 570 aa8.54□□□□□ -1.04
THBS3-201ENST00000368378 DNAJC11Q9NVH1 559 aa8.54□□□□□ -1.04
THBS3-201ENST00000368378 CLEC2DQ9UHP7 191 aa8.54□□□□□ -1.04
THBS3-201ENST00000368378 GSAPA4D1B5 854 aa8.53□□□□□ -1.04
THBS3-201ENST00000368378 H7C4K7 107 aa8.53□□□□□ -1.04
THBS3-201ENST00000368378 CCL16O15467 120 aa8.53□□□□□ -1.04
THBS3-201ENST00000368378 IGSF6O95976 241 aa8.53□□□□□ -1.04
THBS3-201ENST00000368378 CH25HO95992 272 aa8.53□□□□□ -1.04
THBS3-201ENST00000368378 PABPC1P11940 636 aaKnown RBP8.53□□□□□ -1.04
THBS3-201ENST00000368378 HMGA1P17096 107 aaKnown RBP8.53□□□□□ -1.04
THBS3-201ENST00000368378 AOAHP28039 575 aa8.53□□□□□ -1.04
THBS3-201ENST00000368378 NSG1P42857 185 aa8.53□□□□□ -1.04
THBS3-201ENST00000368378 CLDN8P56748 225 aa8.53□□□□□ -1.04
THBS3-201ENST00000368378 HBA1P69905 142 aa8.53□□□□□ -1.04
THBS3-201ENST00000368378 PTSQ03393 145 aa8.53□□□□□ -1.04
THBS3-201ENST00000368378 C2orf80Q0P641 193 aa8.53□□□□□ -1.04
THBS3-201ENST00000368378 GRSF1Q12849 480 aaKnown RBP eCLIP8.53□□□□□ -1.04
THBS3-201ENST00000368378 SELENBP1Q13228 472 aa8.53□□□□□ -1.04
THBS3-201ENST00000368378 ACOX1Q15067 660 aa8.53□□□□□ -1.04
THBS3-201ENST00000368378 RNASE12Q5GAN4 147 aaKnown RBP8.53□□□□□ -1.04
THBS3-201ENST00000368378 EEF1AKMT2Q5JPI9 291 aaKnown RBP8.53□□□□□ -1.04
THBS3-201ENST00000368378 B3GLCTQ6Y288 498 aa8.53□□□□□ -1.04
THBS3-201ENST00000368378 PTCHD4Q6ZW05 846 aa8.53□□□□□ -1.04
THBS3-201ENST00000368378 ARL6IP6Q8N6S5 226 aa8.53□□□□□ -1.04
THBS3-201ENST00000368378 OR6Q1Q8NGQ2 317 aa8.53□□□□□ -1.04
THBS3-201ENST00000368378 PHF10Q8WUB8 498 aaKnown RBP8.53□□□□□ -1.04
THBS3-201ENST00000368378 RELTQ969Z4 430 aa8.53□□□□□ -1.04
THBS3-201ENST00000368378 KCNH6Q9H252 994 aa8.53□□□□□ -1.04
THBS3-201ENST00000368378 TRIT1Q9H3H1 467 aaKnown RBP8.53□□□□□ -1.04
THBS3-201ENST00000368378 CAPN10Q9HC96 672 aa8.53□□□□□ -1.04
THBS3-201ENST00000368378 SAGE1Q9NXZ1 904 aa8.53□□□□□ -1.04
THBS3-201ENST00000368378 DNMT3BQ9UBC3 853 aaKnown RBP8.53□□□□□ -1.04
THBS3-201ENST00000368378 CLEC4AQ9UMR7 237 aa8.53□□□□□ -1.04
THBS3-201ENST00000368378 ARID1AO14497 2285 aa8.53□□□□□ -1.04
THBS3-201ENST00000368378 TAF4O00268 1085 aa8.53□□□□□ -1.04
THBS3-201ENST00000368378 OR10H3O60404 316 aa8.53□□□□□ -1.04
THBS3-201ENST00000368378 TSC22D2O75157 780 aa8.53□□□□□ -1.04
THBS3-201ENST00000368378 GSTM1P09488 218 aa8.53□□□□□ -1.04
THBS3-201ENST00000368378 AMD1P17707 334 aa8.53□□□□□ -1.04
THBS3-201ENST00000368378 FPR1P21462 350 aa8.53□□□□□ -1.04
THBS3-201ENST00000368378 PIK3CBP42338 1070 aa8.53□□□□□ -1.04
THBS3-201ENST00000368378 RECQLP46063 649 aaPredicted RBP8.53□□□□□ -1.04
THBS3-201ENST00000368378 CTAG1AP78358 180 aa8.53□□□□□ -1.04
THBS3-201ENST00000368378 MLLT1Q03111 559 aaPredicted RBP8.53□□□□□ -1.04
THBS3-201ENST00000368378 PPIGQ13427 754 aaKnown RBP eCLIP8.53□□□□□ -1.04
THBS3-201ENST00000368378 DUOXA1Q1HG43 343 aa8.53□□□□□ -1.04
THBS3-201ENST00000368378 SPANXN2Q5MJ10 180 aa8.53□□□□□ -1.04
THBS3-201ENST00000368378 SHQ1Q6PI26 577 aaKnown RBP8.53□□□□□ -1.04
THBS3-201ENST00000368378 BRAT1Q6PJG6 821 aa8.53□□□□□ -1.04
THBS3-201ENST00000368378 TRAF7Q6Q0C0 670 aa8.53□□□□□ -1.04
THBS3-201ENST00000368378 CERS6Q6ZMG9 384 aa8.53□□□□□ -1.04
THBS3-201ENST00000368378 WDR53Q7Z5U6 358 aaPredicted RBP8.53□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms