RNA–Protein interactions for RNA: ENST00000366290.2

YBX3-204, Transcript of Y-box binding protein 3, humanhuman

TSL 2

Gene YBX3, Length 512 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-204ENST00000366290 CPT1BQ92523 772 aa7.58□□□□□ -1.2
YBX3-204ENST00000366290 TSACCQ96A04 125 aaPredicted RBP7.58□□□□□ -1.2
YBX3-204ENST00000366290 PDXPQ96GD0 296 aa7.58□□□□□ -1.2
YBX3-204ENST00000366290 TBL1YQ9BQ87 522 aa7.58□□□□□ -1.2
YBX3-204ENST00000366290 TUBB2BQ9BVA1 445 aa7.58□□□□□ -1.2
YBX3-204ENST00000366290 FRMD8Q9BZ67 464 aaPredicted RBP7.58□□□□□ -1.2
YBX3-204ENST00000366290 ABCG8Q9H221 673 aa7.58□□□□□ -1.2
YBX3-204ENST00000366290 MAGEE1Q9HCI5 957 aa7.58□□□□□ -1.2
YBX3-204ENST00000366290 FGF22Q9HCT0 170 aa7.58□□□□□ -1.2
YBX3-204ENST00000366290 EIF2B3Q9NR50 452 aaKnown RBP7.58□□□□□ -1.2
YBX3-204ENST00000366290 PHPT1Q9NRX4 125 aaPredicted RBP7.58□□□□□ -1.2
YBX3-204ENST00000366290 KIF17Q9P2E2 1029 aa7.58□□□□□ -1.2
YBX3-204ENST00000366290 NFKBIL1Q9UBC1 381 aaPredicted RBP7.58□□□□□ -1.2
YBX3-204ENST00000366290 MGAT4CQ9UBM8 478 aa7.58□□□□□ -1.2
YBX3-204ENST00000366290 AAR2Q9Y312 384 aaKnown RBP7.58□□□□□ -1.2
YBX3-204ENST00000366290 CFAP46Q8IYW2 2715 aa7.58□□□□□ -1.2
YBX3-204ENST00000366290 GXYLT2A0PJZ3 443 aa7.57□□□□□ -1.2
YBX3-204ENST00000366290 ERI2A8K979 691 aaKnown RBP7.57□□□□□ -1.2
YBX3-204ENST00000366290 QSOX1O00391 747 aa7.57□□□□□ -1.2
YBX3-204ENST00000366290 DNALI1O14645 258 aaPredicted RBP7.57□□□□□ -1.2
YBX3-204ENST00000366290 TMPRSS11DO60235 418 aa7.57□□□□□ -1.2
YBX3-204ENST00000366290 FAM155BO75949 473 aa7.57□□□□□ -1.2
YBX3-204ENST00000366290 GAS8O95995 478 aa7.57□□□□□ -1.2
YBX3-204ENST00000366290 TNFP01375 233 aa7.57□□□□□ -1.2
YBX3-204ENST00000366290 FGF1P05230 155 aa7.57□□□□□ -1.2
YBX3-204ENST00000366290 IVLP07476 585 aa7.57□□□□□ -1.2
YBX3-204ENST00000366290 APRTP07741 180 aa7.57□□□□□ -1.2
YBX3-204ENST00000366290 NPSP0C0P6 89 aa7.57□□□□□ -1.2
YBX3-204ENST00000366290 HLA-DPA1P20036 260 aa7.57□□□□□ -1.2
YBX3-204ENST00000366290 TPSB2P20231 275 aa7.57□□□□□ -1.2
YBX3-204ENST00000366290 SPINT3P49223 89 aa7.57□□□□□ -1.2
YBX3-204ENST00000366290 PRKAA2P54646 552 aa7.57□□□□□ -1.2
YBX3-204ENST00000366290 EEFSECP57772 596 aaKnown RBP7.57□□□□□ -1.2
YBX3-204ENST00000366290 DCDC1P59894 354 aa7.57□□□□□ -1.2
YBX3-204ENST00000366290 DHX34Q14147 1143 aaKnown RBP7.57□□□□□ -1.2
YBX3-204ENST00000366290 PRPSAP1Q14558 356 aa7.57□□□□□ -1.2
YBX3-204ENST00000366290 PPP1R7Q15435 360 aa7.57□□□□□ -1.2
YBX3-204ENST00000366290 TPSAB1Q15661 275 aa7.57□□□□□ -1.2
YBX3-204ENST00000366290 DEFB133Q30KQ1 61 aa7.57□□□□□ -1.2
YBX3-204ENST00000366290 HENMT1Q5T8I9 393 aaKnown RBP7.57□□□□□ -1.2
YBX3-204ENST00000366290 RNASEH2BQ5TBB1 312 aaKnown RBP7.57□□□□□ -1.2
YBX3-204ENST00000366290 HES3Q5TGS1 186 aa7.57□□□□□ -1.2
YBX3-204ENST00000366290 C4orf22Q6V702 233 aa7.57□□□□□ -1.2
YBX3-204ENST00000366290 C17orf82Q86X59 251 aaPredicted RBP7.57□□□□□ -1.2
YBX3-204ENST00000366290 GKN2Q86XP6 184 aa7.57□□□□□ -1.2
YBX3-204ENST00000366290 SLC35F3Q8IY50 421 aa7.57□□□□□ -1.2
YBX3-204ENST00000366290 TTC30BQ8N4P2 665 aa7.57□□□□□ -1.2
YBX3-204ENST00000366290 MMGT1Q8N4V1 131 aa7.57□□□□□ -1.2
YBX3-204ENST00000366290 SLC25A41Q8N5S1 370 aa7.57□□□□□ -1.2
YBX3-204ENST00000366290 PAF1Q8N7H5 531 aa7.57□□□□□ -1.2
YBX3-204ENST00000366290 NAT8LQ8N9F0 302 aa7.57□□□□□ -1.2
YBX3-204ENST00000366290 OR6C4Q8NGE1 309 aa7.57□□□□□ -1.2
YBX3-204ENST00000366290 OR52K1Q8NGK4 314 aa7.57□□□□□ -1.2
YBX3-204ENST00000366290 DTX3LQ8TDB6 740 aa7.57□□□□□ -1.2
YBX3-204ENST00000366290 NAT6Q93015 286 aa7.57□□□□□ -1.2
YBX3-204ENST00000366290 AP2M1Q96CW1 435 aa7.57□□□□□ -1.2
YBX3-204ENST00000366290 COX14Q96I36 57 aa7.57□□□□□ -1.2
YBX3-204ENST00000366290 RUNDC3BQ96NL0 473 aa7.57□□□□□ -1.2
YBX3-204ENST00000366290 PPP1R2P1Q96PQ5 205 aa7.57□□□□□ -1.2
YBX3-204ENST00000366290 CARD6Q9BX69 1037 aa7.57□□□□□ -1.2
YBX3-204ENST00000366290 TOR3AQ9H497 397 aa7.57□□□□□ -1.2
YBX3-204ENST00000366290 LRRC40Q9H9A6 602 aa7.57□□□□□ -1.2
YBX3-204ENST00000366290 SNX15Q9NRS6 342 aa7.57□□□□□ -1.2
YBX3-204ENST00000366290 TRNAU1APQ9NX07 287 aaKnown RBP7.57□□□□□ -1.2
YBX3-204ENST00000366290 VPS18Q9P253 973 aa7.57□□□□□ -1.2
YBX3-204ENST00000366290 NFU1Q9UMS0 254 aa7.57□□□□□ -1.2
YBX3-204ENST00000366290 FLNBO75369 2602 aaKnown RBP7.56□□□□□ -1.2
YBX3-204ENST00000366290 C1orf232A0A0U1RR37 186 aa7.56□□□□□ -1.2
YBX3-204ENST00000366290 FAM149AA5PLN7 773 aa7.56□□□□□ -1.2
YBX3-204ENST00000366290 TRABD2BA6NFA1 517 aa7.56□□□□□ -1.2
YBX3-204ENST00000366290 PSMD3O43242 534 aa7.56□□□□□ -1.2
YBX3-204ENST00000366290 SEC31AO94979 1220 aaKnown RBP7.56□□□□□ -1.2
YBX3-204ENST00000366290 CLDN7O95471 211 aa7.56□□□□□ -1.2
YBX3-204ENST00000366290 CTSEP14091 401 aa7.56□□□□□ -1.2
YBX3-204ENST00000366290 ACTN2P35609 894 aa7.56□□□□□ -1.2
YBX3-204ENST00000366290 HMGCLP35914 325 aa7.56□□□□□ -1.2
YBX3-204ENST00000366290 MAGEA3P43357 314 aa7.56□□□□□ -1.2
YBX3-204ENST00000366290 RPL21P46778 160 aaKnown RBP7.56□□□□□ -1.2
YBX3-204ENST00000366290 DIO1P49895 249 aa7.56□□□□□ -1.2
YBX3-204ENST00000366290 TERF1P54274 439 aa7.56□□□□□ -1.2
YBX3-204ENST00000366290 BASP1P80723 227 aaKnown RBP7.56□□□□□ -1.2
YBX3-204ENST00000366290 C1orf61Q13536 156 aa7.56□□□□□ -1.2
YBX3-204ENST00000366290 NR1D2Q14995 579 aa7.56□□□□□ -1.2
YBX3-204ENST00000366290 TRADDQ15628 312 aa7.56□□□□□ -1.2
YBX3-204ENST00000366290 AARS2Q5JTZ9 985 aaKnown RBP7.56□□□□□ -1.2
YBX3-204ENST00000366290 DUPD1Q68J44 220 aa7.56□□□□□ -1.2
YBX3-204ENST00000366290 PDPK2PQ6A1A2 396 aa7.56□□□□□ -1.2
YBX3-204ENST00000366290 RAET1GQ6H3X3 334 aa7.56□□□□□ -1.2
YBX3-204ENST00000366290 GUSBP11Q6P575 273 aa7.56□□□□□ -1.2
YBX3-204ENST00000366290 NRROSQ86YC3 692 aa7.56□□□□□ -1.2
YBX3-204ENST00000366290 SLC16A11Q8NCK7 471 aa7.56□□□□□ -1.2
YBX3-204ENST00000366290 HIC2Q96JB3 615 aa7.56□□□□□ -1.2
YBX3-204ENST00000366290 TRAPPC9Q96Q05 1148 aa7.56□□□□□ -1.2
YBX3-204ENST00000366290 ERP44Q9BS26 406 aa7.56□□□□□ -1.2
YBX3-204ENST00000366290 THAP7Q9BT49 309 aaPredicted RBP7.56□□□□□ -1.2
YBX3-204ENST00000366290 LRRC1Q9BTT6 524 aa7.56□□□□□ -1.2
YBX3-204ENST00000366290 TRABDQ9H4I3 376 aa7.56□□□□□ -1.2
YBX3-204ENST00000366290 MRPL40Q9NQ50 206 aaKnown RBP7.56□□□□□ -1.2
YBX3-204ENST00000366290 GRHL1Q9NZI5 618 aa7.56□□□□□ -1.2
YBX3-204ENST00000366290 ASIC3Q9UHC3 531 aa7.56□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms