RNA–Protein interactions for RNA: ENST00000361716.7

VAMP1-201, Transcript of vesicle associated membrane protein 1, humanhuman

TSL 1 (best) BASIC

Gene VAMP1, Length 3,449 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP1-201ENST00000361716 TAF1CQ15572 869 aaPredicted RBP12.24□□□□□ -0.45
VAMP1-201ENST00000361716 FBXO43Q4G163 708 aa12.24□□□□□ -0.45
VAMP1-201ENST00000361716 PAQR6Q6TCH4 344 aa12.24□□□□□ -0.45
VAMP1-201ENST00000361716 LGI4Q8N135 537 aa12.24□□□□□ -0.45
VAMP1-201ENST00000361716 LSM14AQ8ND56 463 aaKnown RBP12.24□□□□□ -0.45
VAMP1-201ENST00000361716 GPR156Q8NFN8 814 aa12.24□□□□□ -0.45
VAMP1-201ENST00000361716 RHEBL1Q8TAI7 183 aa12.24□□□□□ -0.45
VAMP1-201ENST00000361716 SH3KBP1Q96B97 665 aa12.24□□□□□ -0.45
VAMP1-201ENST00000361716 NIPSNAP1Q9BPW8 284 aa12.24□□□□□ -0.45
VAMP1-201ENST00000361716 BOCQ9BWV1 1114 aa12.24□□□□□ -0.45
VAMP1-201ENST00000361716 SLC35C2Q9NQQ7 365 aa12.24□□□□□ -0.45
VAMP1-201ENST00000361716 ZNF624Q9P2J8 865 aaPredicted RBP12.24□□□□□ -0.45
VAMP1-201ENST00000361716 YARS2Q9Y2Z4 477 aaKnown RBP12.24□□□□□ -0.45
VAMP1-201ENST00000361716 RAI2Q9Y5P3 530 aa12.24□□□□□ -0.45
VAMP1-201ENST00000361716 ARID2Q68CP9 1835 aa12.23□□□□□ -0.45
VAMP1-201ENST00000361716 POM121CA8CG34 1229 aa12.23□□□□□ -0.45
VAMP1-201ENST00000361716 LOC730098B7Z3J9 87 aa12.23□□□□□ -0.45
VAMP1-201ENST00000361716 HHLA1C9JL84 531 aa12.23□□□□□ -0.45
VAMP1-201ENST00000361716 ARNTLO00327 626 aa12.23□□□□□ -0.45
VAMP1-201ENST00000361716 E2F3O00716 465 aa12.23□□□□□ -0.45
VAMP1-201ENST00000361716 KPNA5O15131 536 aa12.23□□□□□ -0.45
VAMP1-201ENST00000361716 SUV39H1O43463 412 aa12.23□□□□□ -0.45
VAMP1-201ENST00000361716 AOC2O75106 756 aa12.23□□□□□ -0.45
VAMP1-201ENST00000361716 CCNDBP1O95273 360 aa12.23□□□□□ -0.45
VAMP1-201ENST00000361716 IL6P05231 212 aa12.23□□□□□ -0.45
VAMP1-201ENST00000361716 RHOCP08134 193 aa12.23□□□□□ -0.45
VAMP1-201ENST00000361716 RHOQP17081 205 aa12.23□□□□□ -0.45
VAMP1-201ENST00000361716 LPOP22079 712 aaPredicted RBP12.23□□□□□ -0.45
VAMP1-201ENST00000361716 TACR1P25103 407 aa12.23□□□□□ -0.45
VAMP1-201ENST00000361716 KDELR2P33947 212 aa12.23□□□□□ -0.45
VAMP1-201ENST00000361716 NUDT1P36639 197 aa12.23□□□□□ -0.45
VAMP1-201ENST00000361716 GRM7Q14831 915 aa12.23□□□□□ -0.45
VAMP1-201ENST00000361716 DDI2Q5TDH0 399 aa12.23□□□□□ -0.45
VAMP1-201ENST00000361716 B3GLCTQ6Y288 498 aa12.23□□□□□ -0.45
VAMP1-201ENST00000361716 ANKS3Q6ZW76 656 aa12.23□□□□□ -0.45
VAMP1-201ENST00000361716 LUZP2Q86TE4 346 aa12.23□□□□□ -0.45
VAMP1-201ENST00000361716 ASB12Q8WXK4 309 aa12.23□□□□□ -0.45
VAMP1-201ENST00000361716 FBXW5Q969U6 566 aa12.23□□□□□ -0.45
VAMP1-201ENST00000361716 COPS8Q99627 209 aa12.23□□□□□ -0.45
VAMP1-201ENST00000361716 MS4A7Q9GZW8 240 aaPredicted RBP12.23□□□□□ -0.45
VAMP1-201ENST00000361716 GPBP1L1Q9HC44 474 aaPredicted RBP12.23□□□□□ -0.45
VAMP1-201ENST00000361716 NKIRAS2Q9NYR9 191 aa12.23□□□□□ -0.45
VAMP1-201ENST00000361716 RPS6KA6Q9UK32 745 aa12.23□□□□□ -0.45
VAMP1-201ENST00000361716 TMCC3Q9ULS5 477 aa12.23□□□□□ -0.45
VAMP1-201ENST00000361716 V9GYH0 126 aa12.23□□□□□ -0.45
VAMP1-201ENST00000361716 IFRD1O00458 451 aaPredicted RBP12.23□□□□□ -0.45
VAMP1-201ENST00000361716 FPGTO14772 594 aa12.23□□□□□ -0.45
VAMP1-201ENST00000361716 FFAR2O15552 330 aa12.23□□□□□ -0.45
VAMP1-201ENST00000361716 ORC5O43913 435 aa12.23□□□□□ -0.45
VAMP1-201ENST00000361716 BCKDHAP12694 445 aa12.23□□□□□ -0.45
VAMP1-201ENST00000361716 CDC42P60953 191 aa12.23□□□□□ -0.45
VAMP1-201ENST00000361716 ZNF792Q3KQV3 632 aa12.23□□□□□ -0.45
VAMP1-201ENST00000361716 SYT14Q8NB59 555 aa12.23□□□□□ -0.45
VAMP1-201ENST00000361716 OR4M2Q8NGB6 313 aa12.23□□□□□ -0.45
VAMP1-201ENST00000361716 NELL1Q92832 810 aa12.23□□□□□ -0.45
VAMP1-201ENST00000361716 CCDC115Q96NT0 180 aa12.23□□□□□ -0.45
VAMP1-201ENST00000361716 PPP1R2P1Q96PQ5 205 aa12.23□□□□□ -0.45
VAMP1-201ENST00000361716 C12orf10Q9HB07 376 aa12.23□□□□□ -0.45
VAMP1-201ENST00000361716 CLN6Q9NWW5 311 aa12.23□□□□□ -0.45
VAMP1-201ENST00000361716 PADI3Q9ULW8 664 aa12.23□□□□□ -0.45
VAMP1-201ENST00000361716 DLGAP4Q9Y2H0 992 aa12.23□□□□□ -0.45
VAMP1-201ENST00000361716 HSPE1-MOB4S4R3N1 261 aa12.23□□□□□ -0.45
VAMP1-201ENST00000361716 TANC1Q9C0D5 1861 aa12.23□□□□□ -0.45
VAMP1-201ENST00000361716 LCHNA4D1U4 455 aa12.23□□□□□ -0.45
VAMP1-201ENST00000361716 FAM227AF5H4B4 570 aa12.23□□□□□ -0.45
VAMP1-201ENST00000361716 CASKO14936 926 aa12.23□□□□□ -0.45
VAMP1-201ENST00000361716 C1QBP02746 253 aa12.23□□□□□ -0.45
VAMP1-201ENST00000361716 SDC2P34741 201 aa12.23□□□□□ -0.45
VAMP1-201ENST00000361716 CRATP43155 626 aa12.23□□□□□ -0.45
VAMP1-201ENST00000361716 RGS4P49798 205 aa12.23□□□□□ -0.45
VAMP1-201ENST00000361716 DUSP4Q13115 394 aa12.23□□□□□ -0.45
VAMP1-201ENST00000361716 AFTPHQ6ULP2 937 aa12.23□□□□□ -0.45
VAMP1-201ENST00000361716 RASSF6Q6ZTQ3 369 aa12.23□□□□□ -0.45
VAMP1-201ENST00000361716 CREB3L2Q70SY1 520 aa12.23□□□□□ -0.45
VAMP1-201ENST00000361716 ZNF680Q8NEM1 530 aa12.23□□□□□ -0.45
VAMP1-201ENST00000361716 BEST4Q8NFU0 473 aa12.23□□□□□ -0.45
VAMP1-201ENST00000361716 MS4A4AQ96JQ5 239 aa12.23□□□□□ -0.45
VAMP1-201ENST00000361716 PSKH2Q96QS6 385 aa12.23□□□□□ -0.45
VAMP1-201ENST00000361716 TRAF4Q9BUZ4 470 aaPredicted RBP12.23□□□□□ -0.45
VAMP1-201ENST00000361716 CHIAQ9BZP6 476 aa12.23□□□□□ -0.45
VAMP1-201ENST00000361716 DERL2Q9GZP9 239 aa12.23□□□□□ -0.45
VAMP1-201ENST00000361716 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP12.23□□□□□ -0.45
VAMP1-201ENST00000361716 TMEM184CQ9NVA4 438 aa12.23□□□□□ -0.45
VAMP1-201ENST00000361716 WDR90Q96KV7 1748 aa12.22□□□□□ -0.45
VAMP1-201ENST00000361716 LOC105369274A0A096LPK9 316 aa12.22□□□□□ -0.45
VAMP1-201ENST00000361716 ADAMDEC1O15204 470 aa12.22□□□□□ -0.45
VAMP1-201ENST00000361716 CCNB2O95067 398 aa12.22□□□□□ -0.45
VAMP1-201ENST00000361716 OTCP00480 354 aa12.22□□□□□ -0.45
VAMP1-201ENST00000361716 ATXN1LP0C7T5 689 aaKnown RBP12.22□□□□□ -0.45
VAMP1-201ENST00000361716 PRR35P0CG20 571 aa12.22□□□□□ -0.45
VAMP1-201ENST00000361716 ITGALP20701 1170 aa12.22□□□□□ -0.45
VAMP1-201ENST00000361716 ALAS2P22557 587 aa12.22□□□□□ -0.45
VAMP1-201ENST00000361716 RPS14P62263 151 aaKnown RBP12.22□□□□□ -0.45
VAMP1-201ENST00000361716 TIAL1Q01085 375 aaKnown RBP eCLIP12.22□□□□□ -0.45
VAMP1-201ENST00000361716 FCN2Q15485 313 aa12.22□□□□□ -0.45
VAMP1-201ENST00000361716 CRTC2Q53ET0 693 aaPredicted RBP12.22□□□□□ -0.45
VAMP1-201ENST00000361716 SLC35F1Q5T1Q4 408 aa12.22□□□□□ -0.45
VAMP1-201ENST00000361716 FAM180BQ6P0A1 224 aa12.22□□□□□ -0.45
VAMP1-201ENST00000361716 USP30Q70CQ3 517 aa12.22□□□□□ -0.45
VAMP1-201ENST00000361716 VN1R5Q7Z5H4 357 aa12.22□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 60.8 ms