RNA–Protein interactions for RNA: ENST00000361439.8

NSMCE1-201, Transcript of NSE1 homolog, SMC5-SMC6 complex component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NSMCE1, Length 1,067 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NSMCE1-201ENST00000361439 ERI3O43414 337 aaKnown RBP13.12□□□□□ -0.31
NSMCE1-201ENST00000361439 SNNO75324 88 aaPredicted RBP13.12□□□□□ -0.31
NSMCE1-201ENST00000361439 SCELO95171 688 aa13.12□□□□□ -0.31
NSMCE1-201ENST00000361439 RECKO95980 971 aa13.12□□□□□ -0.31
NSMCE1-201ENST00000361439 TGFB1P01137 390 aa13.12□□□□□ -0.31
NSMCE1-201ENST00000361439 PDYNP01213 254 aa13.12□□□□□ -0.31
NSMCE1-201ENST00000361439 CHRNGP07510 517 aa13.12□□□□□ -0.31
NSMCE1-201ENST00000361439 CYC1P08574 325 aa13.12□□□□□ -0.31
NSMCE1-201ENST00000361439 ZNF888P0CJ79 500 aaPredicted RBP13.12□□□□□ -0.31
NSMCE1-201ENST00000361439 HNRNPH1P31943 449 aaKnown RBP13.12□□□□□ -0.31
NSMCE1-201ENST00000361439 RPS13P62277 151 aaKnown RBP13.12□□□□□ -0.31
NSMCE1-201ENST00000361439 BST1Q10588 318 aa13.12□□□□□ -0.31
NSMCE1-201ENST00000361439 DDX39BQ13838 428 aaKnown RBP13.12□□□□□ -0.31
NSMCE1-201ENST00000361439 TOR1AIP1Q5JTV8 583 aa13.12□□□□□ -0.31
NSMCE1-201ENST00000361439 MED25Q71SY5 747 aa13.12□□□□□ -0.31
NSMCE1-201ENST00000361439 IL22RA1Q8N6P7 574 aa13.12□□□□□ -0.31
NSMCE1-201ENST00000361439 KDF1Q8NAX2 398 aaPredicted RBP13.12□□□□□ -0.31
NSMCE1-201ENST00000361439 DYDC1Q8WWB3 177 aa13.12□□□□□ -0.31
NSMCE1-201ENST00000361439 KCNE4Q8WWG9 221 aa13.12□□□□□ -0.31
NSMCE1-201ENST00000361439 MR1Q95460 341 aa13.12□□□□□ -0.31
NSMCE1-201ENST00000361439 KIAA1143Q96AT1 154 aaPredicted RBP13.12□□□□□ -0.31
NSMCE1-201ENST00000361439 MACROD1Q9BQ69 325 aa13.12□□□□□ -0.31
NSMCE1-201ENST00000361439 TGIF2Q9GZN2 237 aa13.12□□□□□ -0.31
NSMCE1-201ENST00000361439 VPS29Q9UBQ0 182 aa13.12□□□□□ -0.31
NSMCE1-201ENST00000361439 ADAM29Q9UKF5 820 aa13.12□□□□□ -0.31
NSMCE1-201ENST00000361439 NXT1Q9UKK6 140 aaKnown RBP13.12□□□□□ -0.31
NSMCE1-201ENST00000361439 SSUH2Q9Y2M2 353 aa13.12□□□□□ -0.31
NSMCE1-201ENST00000361439 RAP2CQ9Y3L5 183 aa13.12□□□□□ -0.31
NSMCE1-201ENST00000361439 TRAF6Q9Y4K3 522 aa13.12□□□□□ -0.31
NSMCE1-201ENST00000361439 CHD8Q9HCK8 2581 aa13.12□□□□□ -0.31
NSMCE1-201ENST00000361439 FREM2Q5SZK8 3169 aa13.12□□□□□ -0.31
NSMCE1-201ENST00000361439 APC2O95996 2303 aa13.11□□□□□ -0.31
NSMCE1-201ENST00000361439 RRP8O43159 456 aaKnown RBP13.11□□□□□ -0.31
NSMCE1-201ENST00000361439 TLX3O43711 291 aaPredicted RBP13.11□□□□□ -0.31
NSMCE1-201ENST00000361439 KLHL18O94889 574 aa13.11□□□□□ -0.31
NSMCE1-201ENST00000361439 MED26O95402 600 aa13.11□□□□□ -0.31
NSMCE1-201ENST00000361439 ITGAXP20702 1163 aa13.11□□□□□ -0.31
NSMCE1-201ENST00000361439 ARRB2P32121 409 aa13.11□□□□□ -0.31
NSMCE1-201ENST00000361439 CCR10P46092 362 aa13.11□□□□□ -0.31
NSMCE1-201ENST00000361439 RPL14P50914 215 aaKnown RBP13.11□□□□□ -0.31
NSMCE1-201ENST00000361439 NEK2P51955 445 aa13.11□□□□□ -0.31
NSMCE1-201ENST00000361439 RAP1GDS1P52306 607 aa13.11□□□□□ -0.31
NSMCE1-201ENST00000361439 MTTPP55157 894 aa13.11□□□□□ -0.31
NSMCE1-201ENST00000361439 FOXA1P55317 472 aa13.11□□□□□ -0.31
NSMCE1-201ENST00000361439 ABRAXAS2Q15018 415 aa13.11□□□□□ -0.31
NSMCE1-201ENST00000361439 AP5B1Q2VPB7 878 aa13.11□□□□□ -0.31
NSMCE1-201ENST00000361439 UGT3A2Q3SY77 523 aa13.11□□□□□ -0.31
NSMCE1-201ENST00000361439 SH2D4BQ5SQS7 431 aa13.11□□□□□ -0.31
NSMCE1-201ENST00000361439 C1orf189Q5VU69 101 aa13.11□□□□□ -0.31
NSMCE1-201ENST00000361439 ADNP2Q6IQ32 1131 aa13.11□□□□□ -0.31
NSMCE1-201ENST00000361439 MRPL14Q6P1L8 145 aaKnown RBP13.11□□□□□ -0.31
NSMCE1-201ENST00000361439 OVCH1Q7RTY7 1134 aa13.11□□□□□ -0.31
NSMCE1-201ENST00000361439 PAGE2Q7Z2X7 111 aa13.11□□□□□ -0.31
NSMCE1-201ENST00000361439 ADAMTS18Q8TE60 1221 aa13.11□□□□□ -0.31
NSMCE1-201ENST00000361439 ZNF75CPQ92670 426 aaPredicted RBP13.11□□□□□ -0.31
NSMCE1-201ENST00000361439 NACC2Q96BF6 587 aa13.11□□□□□ -0.31
NSMCE1-201ENST00000361439 MMABQ96EY8 250 aaPredicted RBP13.11□□□□□ -0.31
NSMCE1-201ENST00000361439 QRFPRQ96P65 431 aa13.11□□□□□ -0.31
NSMCE1-201ENST00000361439 OR1F2PQ96R84 312 aa13.11□□□□□ -0.31
NSMCE1-201ENST00000361439 F2RL3Q96RI0 385 aa13.11□□□□□ -0.31
NSMCE1-201ENST00000361439 SERINC2Q96SA4 455 aa13.11□□□□□ -0.31
NSMCE1-201ENST00000361439 AICDAQ9GZX7 198 aa13.11□□□□□ -0.31
NSMCE1-201ENST00000361439 OR51B5Q9H339 312 aa13.11□□□□□ -0.31
NSMCE1-201ENST00000361439 KLHL31Q9H511 634 aa13.11□□□□□ -0.31
NSMCE1-201ENST00000361439 PRM3Q9NNZ6 103 aa13.11□□□□□ -0.31
NSMCE1-201ENST00000361439 MKKSQ9NPJ1 570 aaPredicted RBP13.11□□□□□ -0.31
NSMCE1-201ENST00000361439 C14orf105Q9NVL8 296 aa13.11□□□□□ -0.31
NSMCE1-201ENST00000361439 IFT80Q9P2H3 777 aaPredicted RBP13.11□□□□□ -0.31
NSMCE1-201ENST00000361439 ZNF282Q9UDV7 671 aaPredicted RBP13.11□□□□□ -0.31
NSMCE1-201ENST00000361439 GPN3Q9UHW5 284 aaPredicted RBP13.11□□□□□ -0.31
NSMCE1-201ENST00000361439 PADI2Q9Y2J8 665 aa13.11□□□□□ -0.31
NSMCE1-201ENST00000361439 NAALAD2Q9Y3Q0 740 aa13.11□□□□□ -0.31
NSMCE1-201ENST00000361439 TIMM22Q9Y584 194 aa13.11□□□□□ -0.31
NSMCE1-201ENST00000361439 DNAJC15Q9Y5T4 150 aa13.11□□□□□ -0.31
NSMCE1-201ENST00000361439 SDK2Q58EX2 2172 aa13.11□□□□□ -0.31
NSMCE1-201ENST00000361439 ACACAQ13085 2346 aa13.11□□□□□ -0.31
NSMCE1-201ENST00000361439 A0A0A6YYC8 382 aaPredicted RBP13.1□□□□□ -0.31
NSMCE1-201ENST00000361439 C1QTNF9BB2RNN3 333 aa13.1□□□□□ -0.31
NSMCE1-201ENST00000361439 SLCO1B7G3V0H7 640 aa13.1□□□□□ -0.31
NSMCE1-201ENST00000361439 I3L1I5 382 aaPredicted RBP13.1□□□□□ -0.31
NSMCE1-201ENST00000361439 SLC28A1O00337 649 aa13.1□□□□□ -0.31
NSMCE1-201ENST00000361439 TERTO14746 1132 aaKnown RBP13.1□□□□□ -0.31
NSMCE1-201ENST00000361439 PCDH17O14917 1159 aa13.1□□□□□ -0.31
NSMCE1-201ENST00000361439 B3GALT2O43825 422 aa13.1□□□□□ -0.31
NSMCE1-201ENST00000361439 RSL1D1O76021 490 aaKnown RBP13.1□□□□□ -0.31
NSMCE1-201ENST00000361439 STATHP02808 62 aa13.1□□□□□ -0.31
NSMCE1-201ENST00000361439 C1QTNF9P0C862 333 aa13.1□□□□□ -0.31
NSMCE1-201ENST00000361439 IL1RNP18510 177 aa13.1□□□□□ -0.31
NSMCE1-201ENST00000361439 TCN2P20062 427 aa13.1□□□□□ -0.31
NSMCE1-201ENST00000361439 FBLP22087 321 aaKnown RBP13.1□□□□□ -0.31
NSMCE1-201ENST00000361439 PRPH2P23942 346 aa13.1□□□□□ -0.31
NSMCE1-201ENST00000361439 EIF2S3P41091 472 aaKnown RBP13.1□□□□□ -0.31
NSMCE1-201ENST00000361439 HK2P52789 917 aa13.1□□□□□ -0.31
NSMCE1-201ENST00000361439 PLA2G16P53816 162 aa13.1□□□□□ -0.31
NSMCE1-201ENST00000361439 RPS15P62841 145 aaKnown RBP13.1□□□□□ -0.31
NSMCE1-201ENST00000361439 OCA2Q04671 838 aa13.1□□□□□ -0.31
NSMCE1-201ENST00000361439 CLN3Q13286 438 aa13.1□□□□□ -0.31
NSMCE1-201ENST00000361439 NCF4Q15080 339 aa13.1□□□□□ -0.31
NSMCE1-201ENST00000361439 DEFB134Q4QY38 66 aa13.1□□□□□ -0.31
NSMCE1-201ENST00000361439 CRTC2Q53ET0 693 aaPredicted RBP13.1□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms