RNA–Protein interactions for RNA: ENST00000361367.6

CTR9-201, Transcript of CTR9 homolog, Paf1/RNA polymerase II complex component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTR9, Length 4,586 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTR9-201ENST00000361367 PROS1P07225 676 aa13.34□□□□□ -0.27
CTR9-201ENST00000361367 GIMD1P0DJR0 217 aa13.34□□□□□ -0.27
CTR9-201ENST00000361367 RNH1P13489 461 aaKnown RBP13.34□□□□□ -0.27
CTR9-201ENST00000361367 CD6P30203 668 aa13.34□□□□□ -0.27
CTR9-201ENST00000361367 CCR7P32248 378 aa13.34□□□□□ -0.27
CTR9-201ENST00000361367 GPR153Q6NV75 609 aa13.34□□□□□ -0.27
CTR9-201ENST00000361367 PDZD3Q86UT5 571 aa13.34□□□□□ -0.27
CTR9-201ENST00000361367 CHFRQ96EP1 664 aa13.34□□□□□ -0.27
CTR9-201ENST00000361367 GPR89AB7ZAQ6 455 aa13.34□□□□□ -0.27
CTR9-201ENST00000361367 EI24O14681 340 aa13.34□□□□□ -0.27
CTR9-201ENST00000361367 HCN1O60741 890 aa13.34□□□□□ -0.27
CTR9-201ENST00000361367 GPR89BP0CG08 455 aa13.34□□□□□ -0.27
CTR9-201ENST00000361367 ACADLP28330 430 aa13.34□□□□□ -0.27
CTR9-201ENST00000361367 CTHP32929 405 aa13.34□□□□□ -0.27
CTR9-201ENST00000361367 CDKL4Q5MAI5 379 aa13.34□□□□□ -0.27
CTR9-201ENST00000361367 TRIQKQ629K1 86 aa13.34□□□□□ -0.27
CTR9-201ENST00000361367 NUP54Q7Z3B4 507 aa13.34□□□□□ -0.27
CTR9-201ENST00000361367 CNTN4Q8IWV2 1026 aa13.34□□□□□ -0.27
CTR9-201ENST00000361367 ZZZ3Q8IYH5 903 aa13.34□□□□□ -0.27
CTR9-201ENST00000361367 PARP8Q8N3A8 854 aa13.34□□□□□ -0.27
CTR9-201ENST00000361367 OR10G2Q8NGC3 310 aa13.34□□□□□ -0.27
CTR9-201ENST00000361367 OR5P2Q8WZ92 322 aa13.34□□□□□ -0.27
CTR9-201ENST00000361367 PAIP1Q9H074 479 aaKnown RBP13.34□□□□□ -0.27
CTR9-201ENST00000361367 DNMT3AQ9Y6K1 912 aaPredicted RBP13.34□□□□□ -0.27
CTR9-201ENST00000361367 POLR2AP24928 1970 aaKnown RBP13.34□□□□□ -0.27
CTR9-201ENST00000361367 C1SP09871 688 aa13.34□□□□□ -0.27
CTR9-201ENST00000361367 ZDHHC11BP0C7U3 371 aa13.34□□□□□ -0.27
CTR9-201ENST00000361367 AK4P27144 223 aaPredicted RBP13.34□□□□□ -0.27
CTR9-201ENST00000361367 RPL34P49207 117 aaKnown RBP13.34□□□□□ -0.27
CTR9-201ENST00000361367 GALNT1Q10472 559 aaPredicted RBP13.34□□□□□ -0.27
CTR9-201ENST00000361367 OAFQ86UD1 273 aa13.34□□□□□ -0.27
CTR9-201ENST00000361367 C11orf16Q9NQ32 467 aa13.34□□□□□ -0.27
CTR9-201ENST00000361367 ZNF831Q5JPB2 1677 aa13.34□□□□□ -0.27
CTR9-201ENST00000361367 ARHGEF33A8MVX0 844 aa13.34□□□□□ -0.27
CTR9-201ENST00000361367 GFRA2O00451 464 aa13.34□□□□□ -0.27
CTR9-201ENST00000361367 GABBR2O75899 941 aa13.34□□□□□ -0.27
CTR9-201ENST00000361367 HEXBP07686 556 aa13.34□□□□□ -0.27
CTR9-201ENST00000361367 PTPRRQ15256 657 aa13.34□□□□□ -0.27
CTR9-201ENST00000361367 ZNF77Q15935 545 aa13.34□□□□□ -0.27
CTR9-201ENST00000361367 NANOGP8Q6NSW7 305 aa13.34□□□□□ -0.27
CTR9-201ENST00000361367 ARRDC3Q96B67 414 aa13.34□□□□□ -0.27
CTR9-201ENST00000361367 IFT27Q9BW83 186 aa13.34□□□□□ -0.27
CTR9-201ENST00000361367 NANOGQ9H9S0 305 aa13.34□□□□□ -0.27
CTR9-201ENST00000361367 MARK1Q9P0L2 795 aa13.34□□□□□ -0.27
CTR9-201ENST00000361367 IRAK3Q9Y616 596 aa13.34□□□□□ -0.27
CTR9-201ENST00000361367 PRSS21Q9Y6M0 314 aa13.34□□□□□ -0.27
CTR9-201ENST00000361367 C1orf226A1L170 272 aa13.33□□□□□ -0.28
CTR9-201ENST00000361367 CAPN14A8MX76 684 aa13.33□□□□□ -0.28
CTR9-201ENST00000361367 RGS10O43665 173 aa13.33□□□□□ -0.28
CTR9-201ENST00000361367 NUAK1O60285 661 aa13.33□□□□□ -0.28
CTR9-201ENST00000361367 PPP1R8Q12972 351 aaKnown RBP13.33□□□□□ -0.28
CTR9-201ENST00000361367 TYSND1Q2T9J0 566 aa13.33□□□□□ -0.28
CTR9-201ENST00000361367 CRB2Q5IJ48 1285 aa13.33□□□□□ -0.28
CTR9-201ENST00000361367 OR2T5Q6IEZ7 315 aa13.33□□□□□ -0.28
CTR9-201ENST00000361367 LGI4Q8N135 537 aa13.33□□□□□ -0.28
CTR9-201ENST00000361367 KBTBD8Q8NFY9 601 aa13.33□□□□□ -0.28
CTR9-201ENST00000361367 OR10Q1Q8NGQ4 319 aa13.33□□□□□ -0.28
CTR9-201ENST00000361367 OR2T29Q8NH02 315 aa13.33□□□□□ -0.28
CTR9-201ENST00000361367 OR8K5Q8NH50 307 aa13.33□□□□□ -0.28
CTR9-201ENST00000361367 GRHL3Q8TE85 626 aa13.33□□□□□ -0.28
CTR9-201ENST00000361367 PPP1R14AQ96A00 147 aa13.33□□□□□ -0.28
CTR9-201ENST00000361367 ZHX1-C8orf76Q96EF9 292 aa13.33□□□□□ -0.28
CTR9-201ENST00000361367 GIN1Q9NXP7 522 aa13.33□□□□□ -0.28
CTR9-201ENST00000361367 ADAMTSL1Q8N6G6 1762 aa13.33□□□□□ -0.28
CTR9-201ENST00000361367 H1F0P07305 194 aaKnown RBP13.33□□□□□ -0.28
CTR9-201ENST00000361367 DBTP11182 482 aaKnown RBP13.33□□□□□ -0.28
CTR9-201ENST00000361367 IL1RNP18510 177 aa13.33□□□□□ -0.28
CTR9-201ENST00000361367 OLR1P78380 273 aa13.33□□□□□ -0.28
CTR9-201ENST00000361367 GPR107Q5VW38 600 aa13.33□□□□□ -0.28
CTR9-201ENST00000361367 LYSMD4Q5XG99 296 aa13.33□□□□□ -0.28
CTR9-201ENST00000361367 REEP3Q6NUK4 255 aa13.33□□□□□ -0.28
CTR9-201ENST00000361367 TMPRSS11AQ6ZMR5 421 aa13.33□□□□□ -0.28
CTR9-201ENST00000361367 AHSA2Q719I0 299 aa13.33□□□□□ -0.28
CTR9-201ENST00000361367 ZNF534Q76KX8 674 aa13.33□□□□□ -0.28
CTR9-201ENST00000361367 FATE1Q969F0 183 aa13.33□□□□□ -0.28
CTR9-201ENST00000361367 KIAA1143Q96AT1 154 aaPredicted RBP13.33□□□□□ -0.28
CTR9-201ENST00000361367 ZSWIM3Q96MP5 696 aa13.33□□□□□ -0.28
CTR9-201ENST00000361367 FCRL4Q96PJ5 515 aa13.33□□□□□ -0.28
CTR9-201ENST00000361367 KLHL42Q9P2K6 505 aa13.33□□□□□ -0.28
CTR9-201ENST00000361367 THAP10Q9P2Z0 257 aaPredicted RBP13.33□□□□□ -0.28
CTR9-201ENST00000361367 FTSJ1Q9UET6 329 aa13.33□□□□□ -0.28
CTR9-201ENST00000361367 PCDHGA12O60330 932 aa13.33□□□□□ -0.28
CTR9-201ENST00000361367 MPZL2O60487 215 aa13.33□□□□□ -0.28
CTR9-201ENST00000361367 SNNO75324 88 aaPredicted RBP13.33□□□□□ -0.28
CTR9-201ENST00000361367 FADS2O95864 444 aaKnown RBP13.33□□□□□ -0.28
CTR9-201ENST00000361367 CXCR1P25024 350 aa13.33□□□□□ -0.28
CTR9-201ENST00000361367 GRIK2Q13002 908 aa13.33□□□□□ -0.28
CTR9-201ENST00000361367 KLHDC8AQ8IYD2 350 aa13.33□□□□□ -0.28
CTR9-201ENST00000361367 KDM1BQ8NB78 822 aa13.33□□□□□ -0.28
CTR9-201ENST00000361367 MOSPD2Q8NHP6 518 aa13.33□□□□□ -0.28
CTR9-201ENST00000361367 OAZ3Q9UMX2 235 aa13.33□□□□□ -0.28
CTR9-201ENST00000361367 TBX10O75333 385 aa13.32□□□□□ -0.28
CTR9-201ENST00000361367 PRLP01236 227 aa13.32□□□□□ -0.28
CTR9-201ENST00000361367 UQCRC2P22695 453 aa13.32□□□□□ -0.28
CTR9-201ENST00000361367 ETV4P43268 484 aa13.32□□□□□ -0.28
CTR9-201ENST00000361367 PCYT1AP49585 367 aa13.32□□□□□ -0.28
CTR9-201ENST00000361367 RHDQ02161 417 aa13.32□□□□□ -0.28
CTR9-201ENST00000361367 COL9A2Q14055 689 aaPredicted RBP13.32□□□□□ -0.28
CTR9-201ENST00000361367 TTLL10Q6ZVT0 673 aa13.32□□□□□ -0.28
CTR9-201ENST00000361367 OR2L2Q8NH16 312 aa13.32□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms