RNA–Protein interactions for RNA: ENST00000358771.4

SIRPA-202, Transcript of signal regulatory protein alpha, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SIRPA, Length 3,996 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIRPA-202ENST00000358771 ZNF784Q8NCA9 323 aaPredicted RBP13.68□□□□□ -0.22
SIRPA-202ENST00000358771 ZBED6CLQ96FA7 236 aaPredicted RBP13.68□□□□□ -0.22
SIRPA-202ENST00000358771 DTD2Q96FN9 168 aa13.68□□□□□ -0.22
SIRPA-202ENST00000358771 FEVQ99581 238 aa13.68□□□□□ -0.22
SIRPA-202ENST00000358771 ZNF780BQ9Y6R6 833 aa13.68□□□□□ -0.22
SIRPA-202ENST00000358771 SIP14410 1827 aa13.68□□□□□ -0.22
SIRPA-202ENST00000358771 DOCK6Q96HP0 2047 aa13.68□□□□□ -0.22
SIRPA-202ENST00000358771 CACNA1CQ13936 2221 aa13.68□□□□□ -0.22
SIRPA-202ENST00000358771 H0YAE9 185 aa13.68□□□□□ -0.22
SIRPA-202ENST00000358771 M0R129 80 aa13.68□□□□□ -0.22
SIRPA-202ENST00000358771 VILLO15195 856 aa13.68□□□□□ -0.22
SIRPA-202ENST00000358771 HNRNPA1P09651 372 aaKnown RBP eCLIP13.68□□□□□ -0.22
SIRPA-202ENST00000358771 CD36P16671 472 aa13.68□□□□□ -0.22
SIRPA-202ENST00000358771 CCR3P51677 355 aa13.68□□□□□ -0.22
SIRPA-202ENST00000358771 VBP1P61758 197 aa13.68□□□□□ -0.22
SIRPA-202ENST00000358771 NKX3-2P78367 333 aa13.68□□□□□ -0.22
SIRPA-202ENST00000358771 TARDBPQ13148 414 aaKnown RBP eCLIP13.68□□□□□ -0.22
SIRPA-202ENST00000358771 ZC3H12BQ5HYM0 836 aaKnown RBP13.68□□□□□ -0.22
SIRPA-202ENST00000358771 RBM48Q5RL73 367 aaKnown RBP13.68□□□□□ -0.22
SIRPA-202ENST00000358771 TRIM46Q7Z4K8 759 aa13.68□□□□□ -0.22
SIRPA-202ENST00000358771 GATAD2AQ86YP4 633 aa13.68□□□□□ -0.22
SIRPA-202ENST00000358771 KAT2AQ92830 837 aa13.68□□□□□ -0.22
SIRPA-202ENST00000358771 MIA3Q5JRA6 1907 aa13.68□□□□□ -0.22
SIRPA-202ENST00000358771 DICER1Q9UPY3 1922 aaKnown RBP13.68□□□□□ -0.22
SIRPA-202ENST00000358771 PFN3P60673 137 aa13.68□□□□□ -0.22
SIRPA-202ENST00000358771 NXPE4Q6UWF7 544 aa13.68□□□□□ -0.22
SIRPA-202ENST00000358771 SPRED2Q7Z698 418 aa13.68□□□□□ -0.22
SIRPA-202ENST00000358771 BORCS5Q969J3 196 aa13.68□□□□□ -0.22
SIRPA-202ENST00000358771 LMLNQ96KR4 655 aa13.68□□□□□ -0.22
SIRPA-202ENST00000358771 CCNB1IP1Q9NPC3 277 aa13.68□□□□□ -0.22
SIRPA-202ENST00000358771 SLC6A13Q9NSD5 602 aa13.68□□□□□ -0.22
SIRPA-202ENST00000358771 DDX28Q9NUL7 540 aaKnown RBP13.68□□□□□ -0.22
SIRPA-202ENST00000358771 PPT2Q9UMR5 302 aa13.68□□□□□ -0.22
SIRPA-202ENST00000358771 A0A0J9YVX5 310 aa13.67□□□□□ -0.22
SIRPA-202ENST00000358771 INMTO95050 263 aa13.67□□□□□ -0.22
SIRPA-202ENST00000358771 TCF3P15923 654 aa13.67□□□□□ -0.22
SIRPA-202ENST00000358771 SOX6P35712 828 aa13.67□□□□□ -0.22
SIRPA-202ENST00000358771 UGT8Q16880 541 aa13.67□□□□□ -0.22
SIRPA-202ENST00000358771 GRHL2Q6ISB3 625 aa13.67□□□□□ -0.22
SIRPA-202ENST00000358771 Q6ZPB1 254 aaPredicted RBP13.67□□□□□ -0.22
SIRPA-202ENST00000358771 AQP11Q8NBQ7 271 aa13.67□□□□□ -0.22
SIRPA-202ENST00000358771 ADAMTS15Q8TE58 950 aa13.67□□□□□ -0.22
SIRPA-202ENST00000358771 C1QTNF3Q9BXJ4 246 aa13.67□□□□□ -0.22
SIRPA-202ENST00000358771 TM7SF3Q9NS93 570 aa13.67□□□□□ -0.22
SIRPA-202ENST00000358771 CEPT1Q9Y6K0 416 aa13.67□□□□□ -0.22
SIRPA-202ENST00000358771 CABIN1Q9Y6J0 2220 aa13.67□□□□□ -0.22
SIRPA-202ENST00000358771 PRRT4C9JH25 899 aa13.67□□□□□ -0.22
SIRPA-202ENST00000358771 BMP10O95393 424 aa13.67□□□□□ -0.22
SIRPA-202ENST00000358771 TAS2R41P59536 307 aa13.67□□□□□ -0.22
SIRPA-202ENST00000358771 SMN1Q16637 294 aaKnown RBP13.67□□□□□ -0.22
SIRPA-202ENST00000358771 KIAA1614Q5VZ46 1190 aa13.67□□□□□ -0.22
SIRPA-202ENST00000358771 FBXO46Q6PJ61 603 aaPredicted RBP13.67□□□□□ -0.22
SIRPA-202ENST00000358771 DCP2Q8IU60 420 aaKnown RBP13.67□□□□□ -0.22
SIRPA-202ENST00000358771 CCDC116Q8IYX3 515 aa13.67□□□□□ -0.22
SIRPA-202ENST00000358771 OXR1Q8N573 874 aa13.67□□□□□ -0.22
SIRPA-202ENST00000358771 ACTL8Q9H568 366 aa13.67□□□□□ -0.22
SIRPA-202ENST00000358771 RC3H2Q9HBD1 1191 aaKnown RBP13.67□□□□□ -0.22
SIRPA-202ENST00000358771 TVP23BQ9NYZ1 205 aa13.67□□□□□ -0.22
SIRPA-202ENST00000358771 SPATA7Q9P0W8 599 aa13.67□□□□□ -0.22
SIRPA-202ENST00000358771 ERGIC3Q9Y282 383 aa13.67□□□□□ -0.22
SIRPA-202ENST00000358771 AIREO43918 545 aa13.67□□□□□ -0.22
SIRPA-202ENST00000358771 NME6O75414 186 aaPredicted RBP13.67□□□□□ -0.22
SIRPA-202ENST00000358771 SLC9A5Q14940 896 aa13.67□□□□□ -0.22
SIRPA-202ENST00000358771 FAM78AQ5JUQ0 283 aa13.67□□□□□ -0.22
SIRPA-202ENST00000358771 DPPA4Q7L190 304 aa13.67□□□□□ -0.22
SIRPA-202ENST00000358771 TRIM69Q86WT6 500 aa13.67□□□□□ -0.22
SIRPA-202ENST00000358771 CROCCP3Q8IVE0 287 aa13.67□□□□□ -0.22
SIRPA-202ENST00000358771 SLC35G5Q96KT7 338 aa13.67□□□□□ -0.22
SIRPA-202ENST00000358771 EIF3FO00303 357 aaPredicted RBP13.66□□□□□ -0.22
SIRPA-202ENST00000358771 SLC1A7O00341 560 aa13.66□□□□□ -0.22
SIRPA-202ENST00000358771 PDE9AO76083 593 aa13.66□□□□□ -0.22
SIRPA-202ENST00000358771 ALPLP05186 524 aa13.66□□□□□ -0.22
SIRPA-202ENST00000358771 CCT3P49368 545 aaKnown RBP13.66□□□□□ -0.22
SIRPA-202ENST00000358771 RNF144AP50876 292 aaPredicted RBP13.66□□□□□ -0.22
SIRPA-202ENST00000358771 HBA1P69905 142 aa13.66□□□□□ -0.22
SIRPA-202ENST00000358771 VLDLRP98155 873 aa13.66□□□□□ -0.22
SIRPA-202ENST00000358771 RUNX3Q13761 415 aa13.66□□□□□ -0.22
SIRPA-202ENST00000358771 EEF1AKMT2Q5JPI9 291 aaKnown RBP13.66□□□□□ -0.22
SIRPA-202ENST00000358771 TMC8Q8IU68 726 aa13.66□□□□□ -0.22
SIRPA-202ENST00000358771 ARRDC3Q96B67 414 aa13.66□□□□□ -0.22
SIRPA-202ENST00000358771 SIPA1Q96FS4 1042 aa13.66□□□□□ -0.22
SIRPA-202ENST00000358771 LHPPQ9H008 270 aa13.66□□□□□ -0.22
SIRPA-202ENST00000358771 DPEP2Q9H4A9 486 aa13.66□□□□□ -0.22
SIRPA-202ENST00000358771 NDRG2Q9UN36 371 aaKnown RBP13.66□□□□□ -0.22
SIRPA-202ENST00000358771 A0A1W2PQU0 124 aa13.66□□□□□ -0.22
SIRPA-202ENST00000358771 C1orf105O95561 183 aa13.66□□□□□ -0.22
SIRPA-202ENST00000358771 RETP07949 1114 aa13.66□□□□□ -0.22
SIRPA-202ENST00000358771 MYL12AP19105 171 aa13.66□□□□□ -0.22
SIRPA-202ENST00000358771 PIGAP37287 484 aa13.66□□□□□ -0.22
SIRPA-202ENST00000358771 ID2Q02363 134 aa13.66□□□□□ -0.22
SIRPA-202ENST00000358771 NCF4Q15080 339 aa13.66□□□□□ -0.22
SIRPA-202ENST00000358771 RGNQ15493 299 aa13.66□□□□□ -0.22
SIRPA-202ENST00000358771 EGFLAMQ63HQ2 1017 aa13.66□□□□□ -0.22
SIRPA-202ENST00000358771 BHLHB9Q6PI77 547 aa13.66□□□□□ -0.22
SIRPA-202ENST00000358771 PTRH1Q86Y79 214 aaKnown RBP13.66□□□□□ -0.22
SIRPA-202ENST00000358771 AMER2Q8N7J2 671 aa13.66□□□□□ -0.22
SIRPA-202ENST00000358771 KCT2Q8NC54 265 aa13.66□□□□□ -0.22
SIRPA-202ENST00000358771 RGMAQ96B86 450 aa13.66□□□□□ -0.22
SIRPA-202ENST00000358771 GORASP2Q9H8Y8 452 aa13.66□□□□□ -0.22
SIRPA-202ENST00000358771 ADAP2Q9NPF8 381 aa13.66□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms