RNA–Protein interactions for RNA: ENST00000358511.10

COL6A6-201, Transcript of collagen type VI alpha 6 chain, humanhuman

APPRIS P1 TSL 5 BASIC

Gene COL6A6, Length 9,581 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A6-201ENST00000358511 FAM186AA6NE01 2351 aa8.49□□□□□ -1.05
COL6A6-201ENST00000358511 SCN2BO60939 215 aa8.49□□□□□ -1.05
COL6A6-201ENST00000358511 CAPN3P20807 821 aa8.49□□□□□ -1.05
COL6A6-201ENST00000358511 KELP23276 732 aa8.49□□□□□ -1.05
COL6A6-201ENST00000358511 UGT2B10P36537 528 aa8.49□□□□□ -1.05
COL6A6-201ENST00000358511 NCBP2P52298 156 aaKnown RBP eCLIP8.49□□□□□ -1.05
COL6A6-201ENST00000358511 MC1RQ01726 317 aa8.49□□□□□ -1.05
COL6A6-201ENST00000358511 ELP2Q6IA86 826 aa8.49□□□□□ -1.05
COL6A6-201ENST00000358511 GDPGP1Q6ZNW5 385 aa8.49□□□□□ -1.05
COL6A6-201ENST00000358511 OR5T3Q8NGG3 340 aa8.49□□□□□ -1.05
COL6A6-201ENST00000358511 PYCR2Q96C36 320 aa8.49□□□□□ -1.05
COL6A6-201ENST00000358511 PIP5K1AQ99755 562 aa8.49□□□□□ -1.05
COL6A6-201ENST00000358511 TRPM6Q9BX84 2022 aa8.49□□□□□ -1.05
COL6A6-201ENST00000358511 PSAT1Q9Y617 370 aa8.49□□□□□ -1.05
COL6A6-201ENST00000358511 OR6C74A6NCV1 312 aa8.49□□□□□ -1.05
COL6A6-201ENST00000358511 J3QLW9 94 aa8.49□□□□□ -1.05
COL6A6-201ENST00000358511 LYRM1O43325 122 aa8.49□□□□□ -1.05
COL6A6-201ENST00000358511 HLA-DQB2P05538 268 aa8.49□□□□□ -1.05
COL6A6-201ENST00000358511 ZNF19P17023 458 aa8.49□□□□□ -1.05
COL6A6-201ENST00000358511 RAB5CP51148 216 aa8.49□□□□□ -1.05
COL6A6-201ENST00000358511 DEFA6Q01524 100 aa8.49□□□□□ -1.05
COL6A6-201ENST00000358511 PHYKPLQ8IUZ5 450 aa8.49□□□□□ -1.05
COL6A6-201ENST00000358511 TCEANCQ8N8B7 351 aa8.49□□□□□ -1.05
COL6A6-201ENST00000358511 PROKR2Q8NFJ6 384 aa8.49□□□□□ -1.05
COL6A6-201ENST00000358511 NTAN1Q96AB6 310 aa8.49□□□□□ -1.05
COL6A6-201ENST00000358511 C7orf50Q9BRJ6 194 aaKnown RBP8.49□□□□□ -1.05
COL6A6-201ENST00000358511 FTHL17Q9BXU8 183 aa8.49□□□□□ -1.05
COL6A6-201ENST00000358511 MYNNQ9NPC7 610 aa8.49□□□□□ -1.05
COL6A6-201ENST00000358511 ACTR10Q9NZ32 417 aa8.49□□□□□ -1.05
COL6A6-201ENST00000358511 NLGN3Q9NZ94 848 aa8.49□□□□□ -1.05
COL6A6-201ENST00000358511 A0A096LPI6 279 aa8.49□□□□□ -1.05
COL6A6-201ENST00000358511 GXYLT2A0PJZ3 443 aa8.49□□□□□ -1.05
COL6A6-201ENST00000358511 PCDH17O14917 1159 aa8.49□□□□□ -1.05
COL6A6-201ENST00000358511 AHSGP02765 367 aa8.49□□□□□ -1.05
COL6A6-201ENST00000358511 OPN1SWP03999 348 aa8.49□□□□□ -1.05
COL6A6-201ENST00000358511 T-ENOLP0DO92 83 aa8.49□□□□□ -1.05
COL6A6-201ENST00000358511 CELP19835 753 aa8.49□□□□□ -1.05
COL6A6-201ENST00000358511 SCNN1GP51170 649 aa8.49□□□□□ -1.05
COL6A6-201ENST00000358511 CDK6Q00534 326 aa8.49□□□□□ -1.05
COL6A6-201ENST00000358511 AGAP7PQ5VUJ5 663 aa8.49□□□□□ -1.05
COL6A6-201ENST00000358511 ZNF529Q6P280 563 aa8.49□□□□□ -1.05
COL6A6-201ENST00000358511 ABHD15Q6UXT9 468 aa8.49□□□□□ -1.05
COL6A6-201ENST00000358511 CHRDL2Q6WN34 429 aa8.49□□□□□ -1.05
COL6A6-201ENST00000358511 SAMD14Q8IZD0 417 aaPredicted RBP8.49□□□□□ -1.05
COL6A6-201ENST00000358511 DOHHQ9BU89 302 aa8.49□□□□□ -1.05
COL6A6-201ENST00000358511 GFOD1Q9NXC2 390 aa8.49□□□□□ -1.05
COL6A6-201ENST00000358511 KRBOX1C9JBD0 128 aa8.48□□□□□ -1.05
COL6A6-201ENST00000358511 ZNF208O43345 1280 aa8.48□□□□□ -1.05
COL6A6-201ENST00000358511 CEACAM7Q14002 265 aa8.48□□□□□ -1.05
COL6A6-201ENST00000358511 SELPLGQ14242 412 aa8.48□□□□□ -1.05
COL6A6-201ENST00000358511 SSX2Q16385 188 aa8.48□□□□□ -1.05
COL6A6-201ENST00000358511 ZNF678Q5SXM1 525 aa8.48□□□□□ -1.05
COL6A6-201ENST00000358511 OR7G2Q8NG99 324 aa8.48□□□□□ -1.05
COL6A6-201ENST00000358511 OR5H6Q8NGV6 325 aa8.48□□□□□ -1.05
COL6A6-201ENST00000358511 NDRG1Q92597 394 aaKnown RBP8.48□□□□□ -1.05
COL6A6-201ENST00000358511 TMIGD2Q96BF3 282 aa8.48□□□□□ -1.05
COL6A6-201ENST00000358511 COQ8BQ96D53 544 aa8.48□□□□□ -1.05
COL6A6-201ENST00000358511 PRR11Q96HE9 360 aaPredicted RBP8.48□□□□□ -1.05
COL6A6-201ENST00000358511 KCNA7Q96RP8 456 aa8.48□□□□□ -1.05
COL6A6-201ENST00000358511 USB1Q9BQ65 265 aaKnown RBP8.48□□□□□ -1.05
COL6A6-201ENST00000358511 SH2B3Q9UQQ2 575 aa8.48□□□□□ -1.05
COL6A6-201ENST00000358511 OAZ2O95190 189 aa8.48□□□□□ -1.05
COL6A6-201ENST00000358511 SNAPINO95295 136 aa8.48□□□□□ -1.05
COL6A6-201ENST00000358511 SLC5A2P31639 672 aa8.48□□□□□ -1.05
COL6A6-201ENST00000358511 TRIM23P36406 574 aa8.48□□□□□ -1.05
COL6A6-201ENST00000358511 ATXN1P54253 815 aaKnown RBP8.48□□□□□ -1.05
COL6A6-201ENST00000358511 NKX6-1P78426 367 aaPredicted RBP8.48□□□□□ -1.05
COL6A6-201ENST00000358511 ZNF630Q2M218 657 aaPredicted RBP8.48□□□□□ -1.05
COL6A6-201ENST00000358511 LRRC37A5PQ49AS3 106 aa8.48□□□□□ -1.05
COL6A6-201ENST00000358511 BEST4Q8NFU0 473 aa8.48□□□□□ -1.05
COL6A6-201ENST00000358511 CXorf40BQ96DE9 158 aa8.48□□□□□ -1.05
COL6A6-201ENST00000358511 ARL5BQ96KC2 179 aa8.48□□□□□ -1.05
COL6A6-201ENST00000358511 BRINP2Q9C0B6 783 aa8.48□□□□□ -1.05
COL6A6-201ENST00000358511 VRTNQ9H8Y1 702 aa8.48□□□□□ -1.05
COL6A6-201ENST00000358511 DUXAA6NLW8 204 aa8.48□□□□□ -1.05
COL6A6-201ENST00000358511 VILLO15195 856 aa8.48□□□□□ -1.05
COL6A6-201ENST00000358511 BCHEP06276 602 aa8.48□□□□□ -1.05
COL6A6-201ENST00000358511 CD79BP40259 229 aa8.48□□□□□ -1.05
COL6A6-201ENST00000358511 EIF2DP41214 584 aaKnown RBP8.48□□□□□ -1.05
COL6A6-201ENST00000358511 SPANXN4Q5MJ08 99 aa8.48□□□□□ -1.05
COL6A6-201ENST00000358511 FTMTQ8N4E7 242 aa8.48□□□□□ -1.05
COL6A6-201ENST00000358511 UTP4Q969X6 686 aaKnown RBP8.48□□□□□ -1.05
COL6A6-201ENST00000358511 CYP2S1Q96SQ9 504 aa8.48□□□□□ -1.05
COL6A6-201ENST00000358511 MAGEH1Q9H213 219 aa8.48□□□□□ -1.05
COL6A6-201ENST00000358511 SLC32A1Q9H598 525 aa8.48□□□□□ -1.05
COL6A6-201ENST00000358511 GSKIPQ9P0R6 139 aa8.48□□□□□ -1.05
COL6A6-201ENST00000358511 IFNA2P01563 188 aa8.48□□□□□ -1.05
COL6A6-201ENST00000358511 IGFBP4P22692 258 aa8.48□□□□□ -1.05
COL6A6-201ENST00000358511 MPIP34949 423 aa8.48□□□□□ -1.05
COL6A6-201ENST00000358511 SCNN1AP37088 669 aa8.48□□□□□ -1.05
COL6A6-201ENST00000358511 SREBF2Q12772 1141 aa8.48□□□□□ -1.05
COL6A6-201ENST00000358511 TUSC3Q13454 348 aa8.48□□□□□ -1.05
COL6A6-201ENST00000358511 TATDN3Q17R31 274 aa8.48□□□□□ -1.05
COL6A6-201ENST00000358511 METTL11BQ5VVY1 283 aa8.48□□□□□ -1.05
COL6A6-201ENST00000358511 SLC27A4Q6P1M0 643 aa8.48□□□□□ -1.05
COL6A6-201ENST00000358511 NAPRTQ6XQN6 538 aa8.48□□□□□ -1.05
COL6A6-201ENST00000358511 NPAS3Q8IXF0 933 aa8.48□□□□□ -1.05
COL6A6-201ENST00000358511 KCNN1Q92952 543 aa8.48□□□□□ -1.05
COL6A6-201ENST00000358511 CACNG6Q9BXT2 260 aa8.48□□□□□ -1.05
COL6A6-201ENST00000358511 A0A1W2PRB8 838 aa8.48□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms