RNA–Protein interactions for RNA: ENST00000358028.8

NIPAL3-203, Transcript of NIPA like domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene NIPAL3, Length 1,757 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPAL3-203ENST00000358028 NEIL2Q969S2 332 aa13.72□□□□□ -0.21
NIPAL3-203ENST00000358028 REPS1Q96D71 796 aa13.72□□□□□ -0.21
NIPAL3-203ENST00000358028 LHPPQ9H008 270 aa13.72□□□□□ -0.21
NIPAL3-203ENST00000358028 CORO2BQ9UQ03 480 aa13.72□□□□□ -0.21
NIPAL3-203ENST00000358028 DYRK1BQ9Y463 629 aa13.72□□□□□ -0.21
NIPAL3-203ENST00000358028 HEMK1Q9Y5R4 338 aaPredicted RBP13.72□□□□□ -0.21
NIPAL3-203ENST00000358028 CKAP5Q14008 2032 aa13.72□□□□□ -0.21
NIPAL3-203ENST00000358028 SLC1A7O00341 560 aa13.71□□□□□ -0.21
NIPAL3-203ENST00000358028 BCKDKO14874 412 aa13.71□□□□□ -0.21
NIPAL3-203ENST00000358028 MRPS14O60783 128 aaKnown RBP13.71□□□□□ -0.21
NIPAL3-203ENST00000358028 MMP20O60882 483 aa13.71□□□□□ -0.21
NIPAL3-203ENST00000358028 PFDN1O60925 122 aa13.71□□□□□ -0.21
NIPAL3-203ENST00000358028 BCL10O95999 233 aa13.71□□□□□ -0.21
NIPAL3-203ENST00000358028 C1QCP02747 245 aa13.71□□□□□ -0.21
NIPAL3-203ENST00000358028 SEMG1P04279 462 aa13.71□□□□□ -0.21
NIPAL3-203ENST00000358028 ANXA4P09525 319 aaPredicted RBP13.71□□□□□ -0.21
NIPAL3-203ENST00000358028 INHBBP09529 407 aa13.71□□□□□ -0.21
NIPAL3-203ENST00000358028 LAMP1P11279 417 aa13.71□□□□□ -0.21
NIPAL3-203ENST00000358028 IGFBP5P24593 272 aa13.71□□□□□ -0.21
NIPAL3-203ENST00000358028 TIE1P35590 1138 aa13.71□□□□□ -0.21
NIPAL3-203ENST00000358028 KIR2DL1P43626 348 aaPredicted RBP13.71□□□□□ -0.21
NIPAL3-203ENST00000358028 CXCR4P61073 352 aa13.71□□□□□ -0.21
NIPAL3-203ENST00000358028 RPS13P62277 151 aaKnown RBP13.71□□□□□ -0.21
NIPAL3-203ENST00000358028 VEZF1Q14119 521 aa13.71□□□□□ -0.21
NIPAL3-203ENST00000358028 C16orf72Q14CZ0 275 aa13.71□□□□□ -0.21
NIPAL3-203ENST00000358028 EIF4HQ15056 248 aaKnown RBP13.71□□□□□ -0.21
NIPAL3-203ENST00000358028 MEP1AQ16819 746 aa13.71□□□□□ -0.21
NIPAL3-203ENST00000358028 CTU2Q2VPK5 515 aaKnown RBP13.71□□□□□ -0.21
NIPAL3-203ENST00000358028 ZCCHC8Q6NZY4 707 aaKnown RBP13.71□□□□□ -0.21
NIPAL3-203ENST00000358028 ZNF621Q6ZSS3 439 aa13.71□□□□□ -0.21
NIPAL3-203ENST00000358028 SYTL1Q8IYJ3 562 aa13.71□□□□□ -0.21
NIPAL3-203ENST00000358028 HS3ST5Q8IZT8 346 aa13.71□□□□□ -0.21
NIPAL3-203ENST00000358028 PIK3C3Q8NEB9 887 aa13.71□□□□□ -0.21
NIPAL3-203ENST00000358028 MIPOL1Q8TD10 442 aa13.71□□□□□ -0.21
NIPAL3-203ENST00000358028 WDR34Q96EX3 536 aa13.71□□□□□ -0.21
NIPAL3-203ENST00000358028 PPP1R16AQ96I34 528 aa13.71□□□□□ -0.21
NIPAL3-203ENST00000358028 PHF12Q96QT6 1004 aa13.71□□□□□ -0.21
NIPAL3-203ENST00000358028 FAM129BQ96TA1 746 aa13.71□□□□□ -0.21
NIPAL3-203ENST00000358028 DUSP26Q9BV47 211 aa13.71□□□□□ -0.21
NIPAL3-203ENST00000358028 NAA50Q9GZZ1 169 aaKnown RBP13.71□□□□□ -0.21
NIPAL3-203ENST00000358028 PRM3Q9NNZ6 103 aa13.71□□□□□ -0.21
NIPAL3-203ENST00000358028 RIF1Q5UIP0 2472 aaKnown RBP13.71□□□□□ -0.21
NIPAL3-203ENST00000358028 YY2O15391 372 aa13.71□□□□□ -0.22
NIPAL3-203ENST00000358028 SH3BGRLO75368 114 aa13.71□□□□□ -0.22
NIPAL3-203ENST00000358028 KCNK5O95279 499 aa13.71□□□□□ -0.22
NIPAL3-203ENST00000358028 FPR1P21462 350 aa13.71□□□□□ -0.22
NIPAL3-203ENST00000358028 TIA1P31483 386 aaKnown RBP eCLIP13.71□□□□□ -0.22
NIPAL3-203ENST00000358028 DNAJA1P31689 397 aaKnown RBP13.71□□□□□ -0.22
NIPAL3-203ENST00000358028 HPCAL1P37235 193 aa13.71□□□□□ -0.22
NIPAL3-203ENST00000358028 NBL1P41271 181 aa13.71□□□□□ -0.22
NIPAL3-203ENST00000358028 TNFRSF4P43489 277 aa13.71□□□□□ -0.22
NIPAL3-203ENST00000358028 PLA2G16P53816 162 aa13.71□□□□□ -0.22
NIPAL3-203ENST00000358028 DPTQ07507 201 aa13.71□□□□□ -0.22
NIPAL3-203ENST00000358028 ELAVL3Q14576 367 aaKnown RBP13.71□□□□□ -0.22
NIPAL3-203ENST00000358028 ZNF234Q14588 700 aa13.71□□□□□ -0.22
NIPAL3-203ENST00000358028 ANGPT1Q15389 498 aa13.71□□□□□ -0.22
NIPAL3-203ENST00000358028 HKDC1Q2TB90 917 aa13.71□□□□□ -0.22
NIPAL3-203ENST00000358028 EGFLAMQ63HQ2 1017 aa13.71□□□□□ -0.22
NIPAL3-203ENST00000358028 TSSK4Q6SA08 328 aa13.71□□□□□ -0.22
NIPAL3-203ENST00000358028 Q6ZNX1 250 aa13.71□□□□□ -0.22
NIPAL3-203ENST00000358028 EIF3MQ7L2H7 374 aaKnown RBP13.71□□□□□ -0.22
NIPAL3-203ENST00000358028 PIWIL3Q7Z3Z3 882 aaKnown RBP13.71□□□□□ -0.22
NIPAL3-203ENST00000358028 CAMKMTQ7Z624 323 aa13.71□□□□□ -0.22
NIPAL3-203ENST00000358028 SPEM1Q8N4L4 309 aa13.71□□□□□ -0.22
NIPAL3-203ENST00000358028 OR9A1PQ8NGU1 263 aa13.71□□□□□ -0.22
NIPAL3-203ENST00000358028 SH3KBP1Q96B97 665 aa13.71□□□□□ -0.22
NIPAL3-203ENST00000358028 ZNF514Q96K75 400 aaPredicted RBP13.71□□□□□ -0.22
NIPAL3-203ENST00000358028 LINC00615Q96LM1 132 aaPredicted RBP13.71□□□□□ -0.22
NIPAL3-203ENST00000358028 NODALQ96S42 347 aa13.71□□□□□ -0.22
NIPAL3-203ENST00000358028 IER2Q9BTL4 223 aa13.71□□□□□ -0.22
NIPAL3-203ENST00000358028 SGPP1Q9BX95 441 aa13.71□□□□□ -0.22
NIPAL3-203ENST00000358028 ASPSCR1Q9BZE9 553 aa13.71□□□□□ -0.22
NIPAL3-203ENST00000358028 TRIM39Q9HCM9 518 aa13.71□□□□□ -0.22
NIPAL3-203ENST00000358028 PRMT8Q9NR22 394 aaPredicted RBP13.71□□□□□ -0.22
NIPAL3-203ENST00000358028 BTNL2Q9UIR0 455 aa13.71□□□□□ -0.22
NIPAL3-203ENST00000358028 BAG5Q9UL15 447 aa13.71□□□□□ -0.22
NIPAL3-203ENST00000358028 BTBD3Q9Y2F9 522 aa13.71□□□□□ -0.22
NIPAL3-203ENST00000358028 PCDHB11Q9Y5F2 797 aa13.71□□□□□ -0.22
NIPAL3-203ENST00000358028 C17orf113A0A1B0GUU1 675 aa13.7□□□□□ -0.22
NIPAL3-203ENST00000358028 GABRR3A8MPY1 467 aa13.7□□□□□ -0.22
NIPAL3-203ENST00000358028 CHURC1-FNTBB4DL54 471 aa13.7□□□□□ -0.22
NIPAL3-203ENST00000358028 LAMTOR5O43504 91 aa13.7□□□□□ -0.22
NIPAL3-203ENST00000358028 ZNF682O95780 498 aa13.7□□□□□ -0.22
NIPAL3-203ENST00000358028 FABP3P05413 133 aa13.7□□□□□ -0.22
NIPAL3-203ENST00000358028 HTR1AP08908 422 aa13.7□□□□□ -0.22
NIPAL3-203ENST00000358028 NPPBP16860 134 aa13.7□□□□□ -0.22
NIPAL3-203ENST00000358028 JUNDP17535 347 aa13.7□□□□□ -0.22
NIPAL3-203ENST00000358028 KDELR2P33947 212 aa13.7□□□□□ -0.22
NIPAL3-203ENST00000358028 RXRGP48443 463 aa13.7□□□□□ -0.22
NIPAL3-203ENST00000358028 CDK5R2Q13319 367 aa13.7□□□□□ -0.22
NIPAL3-203ENST00000358028 SPIDRQ14159 915 aa13.7□□□□□ -0.22
NIPAL3-203ENST00000358028 SLBPQ14493 270 aaKnown RBP eCLIP13.7□□□□□ -0.22
NIPAL3-203ENST00000358028 STARD3Q14849 445 aa13.7□□□□□ -0.22
NIPAL3-203ENST00000358028 CATSPEREQ5SY80 951 aa13.7□□□□□ -0.22
NIPAL3-203ENST00000358028 C10orf62Q5T681 223 aaPredicted RBP13.7□□□□□ -0.22
NIPAL3-203ENST00000358028 CPTPQ5TA50 214 aa13.7□□□□□ -0.22
NIPAL3-203ENST00000358028 ANXA8L1Q5VT79 327 aa13.7□□□□□ -0.22
NIPAL3-203ENST00000358028 ANKRD34AQ69YU3 496 aa13.7□□□□□ -0.22
NIPAL3-203ENST00000358028 LAIR2Q6ISS4 152 aa13.7□□□□□ -0.22
NIPAL3-203ENST00000358028 LINC00299Q6ZSB3 139 aa13.7□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms