RNA–Protein interactions for RNA: ENST00000351808.9

IFT88-202, Transcript of intraflagellar transport 88, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene IFT88, Length 2,856 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT88-202ENST00000351808 CENPAP49450 140 aa12.76□□□□□ -0.37
IFT88-202ENST00000351808 STAT5BP51692 787 aa12.76□□□□□ -0.37
IFT88-202ENST00000351808 VSX2P58304 361 aaPredicted RBP12.76□□□□□ -0.37
IFT88-202ENST00000351808 CACNB2Q08289 660 aaPredicted RBP12.76□□□□□ -0.37
IFT88-202ENST00000351808 RRM2BQ7LG56 351 aa12.76□□□□□ -0.37
IFT88-202ENST00000351808 CCDC36Q8IYA8 594 aa12.76□□□□□ -0.37
IFT88-202ENST00000351808 CARNMT1Q8N4J0 409 aa12.76□□□□□ -0.37
IFT88-202ENST00000351808 SLC5A8Q8N695 610 aa12.76□□□□□ -0.37
IFT88-202ENST00000351808 NT5C3BQ969T7 300 aa12.76□□□□□ -0.37
IFT88-202ENST00000351808 NXPE2Q96DL1 559 aa12.76□□□□□ -0.37
IFT88-202ENST00000351808 PRMT6Q96LA8 375 aaPredicted RBP12.76□□□□□ -0.37
IFT88-202ENST00000351808 NRBP2Q9NSY0 501 aa12.76□□□□□ -0.37
IFT88-202ENST00000351808 PCDHGA2Q9Y5H1 932 aa12.76□□□□□ -0.37
IFT88-202ENST00000351808 NPEPPSL1A6NEC2 478 aa12.75□□□□□ -0.37
IFT88-202ENST00000351808 M0R233 179 aa12.75□□□□□ -0.37
IFT88-202ENST00000351808 NDUFS6O75380 124 aaKnown RBP12.75□□□□□ -0.37
IFT88-202ENST00000351808 EPOP01588 193 aa12.75□□□□□ -0.37
IFT88-202ENST00000351808 IQCF3P0C7M6 154 aa12.75□□□□□ -0.37
IFT88-202ENST00000351808 SRCP12931 536 aa12.75□□□□□ -0.37
IFT88-202ENST00000351808 HK1P19367 917 aa12.75□□□□□ -0.37
IFT88-202ENST00000351808 DNASE1P24855 282 aa12.75□□□□□ -0.37
IFT88-202ENST00000351808 WNT3AP56704 352 aa12.75□□□□□ -0.37
IFT88-202ENST00000351808 ABRAXAS2Q15018 415 aa12.75□□□□□ -0.37
IFT88-202ENST00000351808 MPP7Q5T2T1 576 aa12.75□□□□□ -0.37
IFT88-202ENST00000351808 BICRALQ6AI39 1079 aa12.75□□□□□ -0.37
IFT88-202ENST00000351808 GPR150Q8NGU9 434 aa12.75□□□□□ -0.37
IFT88-202ENST00000351808 PCYT2Q99447 389 aa12.75□□□□□ -0.37
IFT88-202ENST00000351808 TXNL4BQ9NX01 149 aaKnown RBP12.75□□□□□ -0.37
IFT88-202ENST00000351808 KIF25Q9UIL4 384 aa12.75□□□□□ -0.37
IFT88-202ENST00000351808 POM121CA8CG34 1229 aa12.75□□□□□ -0.37
IFT88-202ENST00000351808 CSO75390 466 aaKnown RBP12.75□□□□□ -0.37
IFT88-202ENST00000351808 LGI1O95970 557 aa12.75□□□□□ -0.37
IFT88-202ENST00000351808 HLA-DQB2P05538 268 aa12.75□□□□□ -0.37
IFT88-202ENST00000351808 TRIM23P36406 574 aa12.75□□□□□ -0.37
IFT88-202ENST00000351808 MEOX2P50222 304 aa12.75□□□□□ -0.37
IFT88-202ENST00000351808 ITGA1P56199 1179 aa12.75□□□□□ -0.37
IFT88-202ENST00000351808 FAM189BP81408 668 aa12.75□□□□□ -0.37
IFT88-202ENST00000351808 GPR17Q13304 367 aa12.75□□□□□ -0.37
IFT88-202ENST00000351808 CAMK2DQ13557 499 aa12.75□□□□□ -0.37
IFT88-202ENST00000351808 KCTD2Q14681 263 aa12.75□□□□□ -0.37
IFT88-202ENST00000351808 SPHARQ15513 63 aa12.75□□□□□ -0.37
IFT88-202ENST00000351808 OVOS1Q6IE37 1185 aa12.75□□□□□ -0.37
IFT88-202ENST00000351808 XRRA1Q6P2D8 792 aa12.75□□□□□ -0.37
IFT88-202ENST00000351808 DOK6Q6PKX4 331 aa12.75□□□□□ -0.37
IFT88-202ENST00000351808 CDH26Q8IXH8 852 aa12.75□□□□□ -0.37
IFT88-202ENST00000351808 OR2T4Q8NH00 348 aa12.75□□□□□ -0.37
IFT88-202ENST00000351808 CERKQ8TCT0 537 aa12.75□□□□□ -0.37
IFT88-202ENST00000351808 FUBP1Q96AE4 644 aaKnown RBP12.75□□□□□ -0.37
IFT88-202ENST00000351808 TSGA13Q96PP4 275 aa12.75□□□□□ -0.37
IFT88-202ENST00000351808 MGAT4BQ9UQ53 548 aa12.75□□□□□ -0.37
IFT88-202ENST00000351808 PADI2Q9Y2J8 665 aa12.75□□□□□ -0.37
IFT88-202ENST00000351808 FAM74A7A6NL05 159 aa12.75□□□□□ -0.37
IFT88-202ENST00000351808 BTN3A1O00481 513 aa12.75□□□□□ -0.37
IFT88-202ENST00000351808 SIGLEC5O15389 551 aa12.75□□□□□ -0.37
IFT88-202ENST00000351808 IL1AP01583 271 aa12.75□□□□□ -0.37
IFT88-202ENST00000351808 LMO2P25791 158 aa12.75□□□□□ -0.37
IFT88-202ENST00000351808 PIK3CGP48736 1102 aa12.75□□□□□ -0.37
IFT88-202ENST00000351808 SIGLEC14Q08ET2 396 aa12.75□□□□□ -0.37
IFT88-202ENST00000351808 IQCCQ4KMZ1 466 aa12.75□□□□□ -0.37
IFT88-202ENST00000351808 FAM74A3Q4VXF1 159 aa12.75□□□□□ -0.37
IFT88-202ENST00000351808 GPR155Q7Z3F1 870 aa12.75□□□□□ -0.37
IFT88-202ENST00000351808 TMEM132CQ8N3T6 1108 aa12.75□□□□□ -0.37
IFT88-202ENST00000351808 CLDN22Q8N7P3 220 aa12.75□□□□□ -0.37
IFT88-202ENST00000351808 SYT14Q8NB59 555 aa12.75□□□□□ -0.37
IFT88-202ENST00000351808 OR52J3Q8NH60 311 aa12.75□□□□□ -0.37
IFT88-202ENST00000351808 KCNJ15Q99712 375 aa12.75□□□□□ -0.37
IFT88-202ENST00000351808 NIPSNAP1Q9BPW8 284 aa12.75□□□□□ -0.37
IFT88-202ENST00000351808 POLR2J2Q9GZM3 115 aaKnown RBP12.75□□□□□ -0.37
IFT88-202ENST00000351808 FZD8Q9H461 694 aa12.75□□□□□ -0.37
IFT88-202ENST00000351808 RBM22Q9NW64 420 aaKnown RBP eCLIP12.75□□□□□ -0.37
IFT88-202ENST00000351808 SH3BP4Q9P0V3 963 aa12.75□□□□□ -0.37
IFT88-202ENST00000351808 OR12D3Q9UGF7 316 aa12.75□□□□□ -0.37
IFT88-202ENST00000351808 FBXL2Q9UKC9 423 aa12.75□□□□□ -0.37
IFT88-202ENST00000351808 EXO1Q9UQ84 846 aaKnown RBP12.75□□□□□ -0.37
IFT88-202ENST00000351808 SSX5O60225 188 aa12.74□□□□□ -0.37
IFT88-202ENST00000351808 RGS11O94810 467 aa12.74□□□□□ -0.37
IFT88-202ENST00000351808 APOC3P02656 99 aa12.74□□□□□ -0.37
IFT88-202ENST00000351808 SEMG1P04279 462 aa12.74□□□□□ -0.37
IFT88-202ENST00000351808 HLA-EP13747 358 aa12.74□□□□□ -0.37
IFT88-202ENST00000351808 POU2F1P14859 743 aa12.74□□□□□ -0.37
IFT88-202ENST00000351808 SMPD1P17405 629 aa12.74□□□□□ -0.37
IFT88-202ENST00000351808 CDKN2CP42773 168 aa12.74□□□□□ -0.37
IFT88-202ENST00000351808 BTG1P62324 171 aa12.74□□□□□ -0.37
IFT88-202ENST00000351808 ABHD18Q0P651 414 aa12.74□□□□□ -0.37
IFT88-202ENST00000351808 ABRQ12979 859 aa12.74□□□□□ -0.37
IFT88-202ENST00000351808 USP39Q53GS9 565 aaKnown RBP12.74□□□□□ -0.37
IFT88-202ENST00000351808 CDKL4Q5MAI5 379 aa12.74□□□□□ -0.37
IFT88-202ENST00000351808 ASB18Q6ZVZ8 466 aa12.74□□□□□ -0.37
IFT88-202ENST00000351808 TRIM69Q86WT6 500 aa12.74□□□□□ -0.37
IFT88-202ENST00000351808 ADGRF3Q8IZF5 1079 aa12.74□□□□□ -0.37
IFT88-202ENST00000351808 DPYSL5Q9BPU6 564 aa12.74□□□□□ -0.37
IFT88-202ENST00000351808 DPH7Q9BTV6 452 aa12.74□□□□□ -0.37
IFT88-202ENST00000351808 MFSD1Q9H3U5 465 aa12.74□□□□□ -0.37
IFT88-202ENST00000351808 LOC105369274A0A096LPK9 316 aa12.74□□□□□ -0.37
IFT88-202ENST00000351808 KPNA5O15131 536 aa12.74□□□□□ -0.37
IFT88-202ENST00000351808 SULT1B1O43704 296 aa12.74□□□□□ -0.37
IFT88-202ENST00000351808 IL6P05231 212 aa12.74□□□□□ -0.37
IFT88-202ENST00000351808 OR56A5P0C7T3 313 aa12.74□□□□□ -0.37
IFT88-202ENST00000351808 MAPK1P28482 360 aa12.74□□□□□ -0.37
IFT88-202ENST00000351808 KDELR2P33947 212 aa12.74□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms