RNA–Protein interactions for RNA: ENST00000351288.10

SMPD4-201, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 2 BASIC

Gene SMPD4, Length 3,661 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-201ENST00000351288 LMLNQ96KR4 655 aa9.99□□□□□ -0.81
SMPD4-201ENST00000351288 ASB16Q96NS5 453 aa9.99□□□□□ -0.81
SMPD4-201ENST00000351288 FUNDC2Q9BWH2 189 aa9.99□□□□□ -0.81
SMPD4-201ENST00000351288 OSBPL10Q9BXB5 764 aa9.99□□□□□ -0.81
SMPD4-201ENST00000351288 CUEDC1Q9NWM3 386 aaPredicted RBP9.99□□□□□ -0.81
SMPD4-201ENST00000351288 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP9.99□□□□□ -0.814e-7■■■□□ 17.3
SMPD4-201ENST00000351288 PNMA8CA0A1B0GUJ8 204 aa9.98□□□□□ -0.81
SMPD4-201ENST00000351288 H0Y8X5 98 aa9.98□□□□□ -0.81
SMPD4-201ENST00000351288 BCKDKO14874 412 aa9.98□□□□□ -0.81
SMPD4-201ENST00000351288 ERI3O43414 337 aaKnown RBP9.98□□□□□ -0.81
SMPD4-201ENST00000351288 PI15O43692 258 aa9.98□□□□□ -0.81
SMPD4-201ENST00000351288 BCL10O95999 233 aa9.98□□□□□ -0.81
SMPD4-201ENST00000351288 VIPP01282 170 aa9.98□□□□□ -0.81
SMPD4-201ENST00000351288 RB1P06400 928 aa9.98□□□□□ -0.81
SMPD4-201ENST00000351288 NR2F1P10589 423 aa9.98□□□□□ -0.81
SMPD4-201ENST00000351288 ETFAP13804 333 aa9.98□□□□□ -0.81
SMPD4-201ENST00000351288 IGFBP5P24593 272 aa9.98□□□□□ -0.81
SMPD4-201ENST00000351288 LRRC32Q14392 662 aa9.98□□□□□ -0.81
SMPD4-201ENST00000351288 TBC1D25Q3MII6 688 aa9.98□□□□□ -0.81
SMPD4-201ENST00000351288 OLIG3Q7RTU3 272 aa9.98□□□□□ -0.81
SMPD4-201ENST00000351288 DCP2Q8IU60 420 aaKnown RBP9.98□□□□□ -0.81
SMPD4-201ENST00000351288 RNF168Q8IYW5 571 aaPredicted RBP9.98□□□□□ -0.81
SMPD4-201ENST00000351288 OR8J3Q8NGG0 315 aa9.98□□□□□ -0.81
SMPD4-201ENST00000351288 WDR48Q8TAF3 677 aa9.98□□□□□ -0.81
SMPD4-201ENST00000351288 CCDC3Q9BQI4 270 aa9.98□□□□□ -0.81
SMPD4-201ENST00000351288 SLC35A5Q9BS91 424 aa9.98□□□□□ -0.81
SMPD4-201ENST00000351288 TRIT1Q9H3H1 467 aaKnown RBP9.98□□□□□ -0.81
SMPD4-201ENST00000351288 DCAF13Q9NV06 445 aaKnown RBP9.98□□□□□ -0.81
SMPD4-201ENST00000351288 SELENONQ9NZV5 590 aa9.98□□□□□ -0.81
SMPD4-201ENST00000351288 SPAG17Q6Q759 2223 aa9.98□□□□□ -0.81
SMPD4-201ENST00000351288 TTC28Q96AY4 2481 aa9.98□□□□□ -0.81
SMPD4-201ENST00000351288 NOTCH4Q99466 2003 aa9.98□□□□□ -0.81
SMPD4-201ENST00000351288 A0A1W2PRB8 838 aa9.98□□□□□ -0.81
SMPD4-201ENST00000351288 KLHL33A6NCF5 533 aa9.98□□□□□ -0.81
SMPD4-201ENST00000351288 SERPINI2O75830 405 aa9.98□□□□□ -0.81
SMPD4-201ENST00000351288 RPN2P04844 631 aa9.98□□□□□ -0.81
SMPD4-201ENST00000351288 IL3P08700 152 aa9.98□□□□□ -0.81
SMPD4-201ENST00000351288 JUPP14923 745 aa9.98□□□□□ -0.81
SMPD4-201ENST00000351288 IMPA1P29218 277 aa9.98□□□□□ -0.81
SMPD4-201ENST00000351288 FEN1P39748 380 aaKnown RBP9.98□□□□□ -0.81
SMPD4-201ENST00000351288 MMP12P39900 470 aa9.98□□□□□ -0.81
SMPD4-201ENST00000351288 BUD31P41223 144 aaPredicted RBP9.98□□□□□ -0.81
SMPD4-201ENST00000351288 CD300CQ08708 224 aa9.98□□□□□ -0.81
SMPD4-201ENST00000351288 MADCAM1Q13477 382 aa9.98□□□□□ -0.81
SMPD4-201ENST00000351288 CARTPTQ16568 116 aa9.98□□□□□ -0.81
SMPD4-201ENST00000351288 SYT16Q17RD7 645 aa9.98□□□□□ -0.81
SMPD4-201ENST00000351288 C9orf64Q5T6V5 341 aa9.98□□□□□ -0.81
SMPD4-201ENST00000351288 ZNF773Q6PK81 442 aa9.98□□□□□ -0.81
SMPD4-201ENST00000351288 VOPP1Q96AW1 172 aa9.98□□□□□ -0.81
SMPD4-201ENST00000351288 TPSD1Q9BZJ3 242 aa9.98□□□□□ -0.81
SMPD4-201ENST00000351288 RETREG1Q9H6L5 497 aa9.98□□□□□ -0.81
SMPD4-201ENST00000351288 MBNL1Q9NR56 388 aaKnown RBP9.98□□□□□ -0.81
SMPD4-201ENST00000351288 TRPS1Q9UHF7 1281 aa9.98□□□□□ -0.81
SMPD4-201ENST00000351288 SH2B3Q9UQQ2 575 aa9.98□□□□□ -0.81
SMPD4-201ENST00000351288 GMPPBQ9Y5P6 360 aa9.98□□□□□ -0.81
SMPD4-201ENST00000351288 WASHC1A8K0Z3 465 aa9.98□□□□□ -0.81
SMPD4-201ENST00000351288 SLC28A2O43868 658 aa9.98□□□□□ -0.81
SMPD4-201ENST00000351288 ANGPTL1O95841 491 aa9.98□□□□□ -0.81
SMPD4-201ENST00000351288 ATP6V1E1P36543 226 aa9.98□□□□□ -0.81
SMPD4-201ENST00000351288 C21orf59P57076 290 aa9.98□□□□□ -0.81
SMPD4-201ENST00000351288 PPP2R2BQ00005 443 aa9.98□□□□□ -0.81
SMPD4-201ENST00000351288 UGT8Q16880 541 aa9.98□□□□□ -0.81
SMPD4-201ENST00000351288 GPAT3Q53EU6 434 aa9.98□□□□□ -0.81
SMPD4-201ENST00000351288 WASH2PQ6VEQ5 465 aa9.98□□□□□ -0.81
SMPD4-201ENST00000351288 RNF130Q86XS8 419 aa9.98□□□□□ -0.81
SMPD4-201ENST00000351288 CACTIN-AS1Q8N1I8 211 aa9.98□□□□□ -0.81
SMPD4-201ENST00000351288 GLMNQ92990 594 aa9.98□□□□□ -0.81
SMPD4-201ENST00000351288 PYURFQ96I23 114 aa9.98□□□□□ -0.81
SMPD4-201ENST00000351288 KCNC2Q96PR1 638 aa9.98□□□□□ -0.81
SMPD4-201ENST00000351288 CPPED1Q9BRF8 314 aaPredicted RBP9.98□□□□□ -0.81
SMPD4-201ENST00000351288 NTMT1Q9BV86 223 aa9.98□□□□□ -0.81
SMPD4-201ENST00000351288 RBCK1Q9BYM8 510 aa9.98□□□□□ -0.81
SMPD4-201ENST00000351288 PRSS16Q9NQE7 514 aa9.98□□□□□ -0.81
SMPD4-201ENST00000351288 ATAD3AQ9NVI7 634 aa9.98□□□□□ -0.81
SMPD4-201ENST00000351288 SIRT5Q9NXA8 310 aa9.98□□□□□ -0.81
SMPD4-201ENST00000351288 SERGEFQ9UGK8 458 aa9.98□□□□□ -0.81
SMPD4-201ENST00000351288 YBX2Q9Y2T7 364 aaKnown RBP9.98□□□□□ -0.81
SMPD4-201ENST00000351288 COL4A6Q14031 1691 aa9.97□□□□□ -0.81
SMPD4-201ENST00000351288 ANKRD33BA6NCL7 494 aa9.97□□□□□ -0.81
SMPD4-201ENST00000351288 SLC1A7O00341 560 aa9.97□□□□□ -0.81
SMPD4-201ENST00000351288 NDUFS4O43181 175 aa9.97□□□□□ -0.81
SMPD4-201ENST00000351288 LILRB3O75022 631 aa9.97□□□□□ -0.81
SMPD4-201ENST00000351288 FAM20BO75063 409 aa9.97□□□□□ -0.81
SMPD4-201ENST00000351288 PNLIPRP1P54315 467 aa9.97□□□□□ -0.81
SMPD4-201ENST00000351288 PFN3P60673 137 aa9.97□□□□□ -0.81
SMPD4-201ENST00000351288 CSTF3Q12996 717 aaKnown RBP9.97□□□□□ -0.81
SMPD4-201ENST00000351288 TJAP1Q5JTD0 557 aa9.97□□□□□ -0.81
SMPD4-201ENST00000351288 AHSA2Q719I0 299 aa9.97□□□□□ -0.81
SMPD4-201ENST00000351288 COMMD6Q7Z4G1 85 aa9.97□□□□□ -0.81
SMPD4-201ENST00000351288 TRIM46Q7Z4K8 759 aa9.97□□□□□ -0.81
SMPD4-201ENST00000351288 TRIM73Q86UV7 250 aa9.97□□□□□ -0.81
SMPD4-201ENST00000351288 NLGN4XQ8N0W4 816 aa9.97□□□□□ -0.81
SMPD4-201ENST00000351288 GLB1L3Q8NCI6 653 aaPredicted RBP9.97□□□□□ -0.81
SMPD4-201ENST00000351288 USP7Q93009 1102 aa9.97□□□□□ -0.81
SMPD4-201ENST00000351288 ZNF707Q96C28 371 aaPredicted RBP9.97□□□□□ -0.81
SMPD4-201ENST00000351288 HSH2DQ96JZ2 352 aa9.97□□□□□ -0.81
SMPD4-201ENST00000351288 ALOXE3Q9BYJ1 711 aa9.97□□□□□ -0.81
SMPD4-201ENST00000351288 POLE4Q9NR33 117 aa9.97□□□□□ -0.81
SMPD4-201ENST00000351288 KRT84Q9NSB2 600 aa9.97□□□□□ -0.81
SMPD4-201ENST00000351288 SLC23A2Q9UGH3 650 aa9.97□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 52 ms