RNA–Protein interactions for RNA: ENST00000347613.8

CLCN3-201, Transcript of chloride voltage-gated channel 3, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene CLCN3, Length 3,635 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3-201ENST00000347613 HIST1H2AJQ99878 128 aa5.79□□□□□ -1.48
CLCN3-201ENST00000347613 TCF25Q9BQ70 676 aa5.79□□□□□ -1.48
CLCN3-201ENST00000347613 H2AFJQ9BTM1 129 aa5.79□□□□□ -1.48
CLCN3-201ENST00000347613 OR2AG1Q9H205 316 aa5.79□□□□□ -1.48
CLCN3-201ENST00000347613 TM9SF3Q9HD45 589 aa5.79□□□□□ -1.48
CLCN3-201ENST00000347613 LHX9Q9NQ69 397 aa5.79□□□□□ -1.48
CLCN3-201ENST00000347613 ITM2CQ9NQX7 267 aa5.79□□□□□ -1.48
CLCN3-201ENST00000347613 C1GALT1Q9NS00 363 aa5.79□□□□□ -1.48
CLCN3-201ENST00000347613 TMEM39AQ9NV64 488 aa5.79□□□□□ -1.48
CLCN3-201ENST00000347613 LSM7Q9UK45 103 aaKnown RBP5.79□□□□□ -1.48
CLCN3-201ENST00000347613 MAP4K5Q9Y4K4 846 aa5.79□□□□□ -1.48
CLCN3-201ENST00000347613 PCDHGB1Q9Y5G3 927 aa5.79□□□□□ -1.48
CLCN3-201ENST00000347613 FEZF1A0PJY2 475 aa5.79□□□□□ -1.48
CLCN3-201ENST00000347613 SERTM1A2A2V5 107 aa5.79□□□□□ -1.48
CLCN3-201ENST00000347613 OR2A25A4D2G3 310 aa5.79□□□□□ -1.48
CLCN3-201ENST00000347613 TMEM247A6NEH6 219 aa5.79□□□□□ -1.48
CLCN3-201ENST00000347613 C4orf51C9J302 202 aa5.79□□□□□ -1.48
CLCN3-201ENST00000347613 LRG1P02750 347 aa5.79□□□□□ -1.48
CLCN3-201ENST00000347613 KLK1P06870 262 aa5.79□□□□□ -1.48
CLCN3-201ENST00000347613 IL1RNP18510 177 aa5.79□□□□□ -1.48
CLCN3-201ENST00000347613 VIPR1P32241 457 aa5.79□□□□□ -1.48
CLCN3-201ENST00000347613 MMP12P39900 470 aa5.79□□□□□ -1.48
CLCN3-201ENST00000347613 MAGEA10P43363 369 aaPredicted RBP5.79□□□□□ -1.48
CLCN3-201ENST00000347613 TPD52P55327 224 aaPredicted RBP5.79□□□□□ -1.48
CLCN3-201ENST00000347613 CYP4F2P78329 520 aa5.79□□□□□ -1.48
CLCN3-201ENST00000347613 ILF2Q12905 390 aaKnown RBP5.79□□□□□ -1.48
CLCN3-201ENST00000347613 CAMK2GQ13555 558 aaPredicted RBP5.79□□□□□ -1.48
CLCN3-201ENST00000347613 EXOC3L2Q2M3D2 409 aa5.79□□□□□ -1.48
CLCN3-201ENST00000347613 DGLUCYQ7Z3D6 616 aa5.79□□□□□ -1.48
CLCN3-201ENST00000347613 JAZF1Q86VZ6 243 aa5.79□□□□□ -1.48
CLCN3-201ENST00000347613 RNF130Q86XS8 419 aa5.79□□□□□ -1.48
CLCN3-201ENST00000347613 PLD3Q8IV08 490 aa5.79□□□□□ -1.48
CLCN3-201ENST00000347613 PGBD3Q8N328 593 aa5.79□□□□□ -1.48
CLCN3-201ENST00000347613 CPA6Q8N4T0 437 aa5.79□□□□□ -1.48
CLCN3-201ENST00000347613 OR5AR1Q8NGP9 310 aa5.79□□□□□ -1.48
CLCN3-201ENST00000347613 RAB2BQ8WUD1 216 aa5.79□□□□□ -1.48
CLCN3-201ENST00000347613 GGHQ92820 318 aa5.79□□□□□ -1.48
CLCN3-201ENST00000347613 GLYATL1Q969I3 302 aa5.79□□□□□ -1.48
CLCN3-201ENST00000347613 PRR14Q9BWN1 585 aa5.79□□□□□ -1.48
CLCN3-201ENST00000347613 CFHR5Q9BXR6 569 aa5.79□□□□□ -1.48
CLCN3-201ENST00000347613 SERHL2Q9H4I8 314 aa5.79□□□□□ -1.48
CLCN3-201ENST00000347613 RUBCNLQ9H714 662 aa5.79□□□□□ -1.48
CLCN3-201ENST00000347613 ANKRA2Q9H9E1 313 aa5.79□□□□□ -1.48
CLCN3-201ENST00000347613 PFDN4Q9NQP4 134 aa5.79□□□□□ -1.48
CLCN3-201ENST00000347613 TDP1Q9NUW8 608 aa5.79□□□□□ -1.48
CLCN3-201ENST00000347613 C3orf18Q9UK00 162 aa5.79□□□□□ -1.48
CLCN3-201ENST00000347613 GMPPBQ9Y5P6 360 aa5.79□□□□□ -1.48
CLCN3-201ENST00000347613 A0A0G2JN53 185 aa5.79□□□□□ -1.48
CLCN3-201ENST00000347613 MMP20O60882 483 aa5.79□□□□□ -1.48
CLCN3-201ENST00000347613 PAPLNO95428 1278 aa5.79□□□□□ -1.48
CLCN3-201ENST00000347613 PTHP01270 115 aa5.79□□□□□ -1.48
CLCN3-201ENST00000347613 GASTP01350 101 aa5.79□□□□□ -1.48
CLCN3-201ENST00000347613 HNRNPCP07910 306 aaKnown RBP eCLIP5.79□□□□□ -1.48
CLCN3-201ENST00000347613 STSP08842 583 aa5.79□□□□□ -1.48
CLCN3-201ENST00000347613 DNAJA1P31689 397 aaKnown RBP5.79□□□□□ -1.48
CLCN3-201ENST00000347613 CRATP43155 626 aa5.79□□□□□ -1.48
CLCN3-201ENST00000347613 CLK1P49759 484 aaKnown RBP5.79□□□□□ -1.48
CLCN3-201ENST00000347613 HNMTP50135 292 aa5.79□□□□□ -1.48
CLCN3-201ENST00000347613 ITGA1P56199 1179 aa5.79□□□□□ -1.48
CLCN3-201ENST00000347613 GABARAPL2P60520 117 aa5.79□□□□□ -1.48
CLCN3-201ENST00000347613 TAP2Q03519 686 aa5.79□□□□□ -1.48
CLCN3-201ENST00000347613 RELAQ04206 551 aa5.79□□□□□ -1.48
CLCN3-201ENST00000347613 SEC23BQ15437 767 aa5.79□□□□□ -1.48
CLCN3-201ENST00000347613 FLYWCH1Q4VC44 716 aa5.79□□□□□ -1.48
CLCN3-201ENST00000347613 ZC3H12BQ5HYM0 836 aaKnown RBP5.79□□□□□ -1.48
CLCN3-201ENST00000347613 SYT6Q5T7P8 510 aaPredicted RBP5.79□□□□□ -1.48
CLCN3-201ENST00000347613 LIPJQ5W064 366 aa5.79□□□□□ -1.48
CLCN3-201ENST00000347613 GRHL2Q6ISB3 625 aa5.79□□□□□ -1.48
CLCN3-201ENST00000347613 UTS2BQ765I0 119 aa5.79□□□□□ -1.48
CLCN3-201ENST00000347613 CADM3Q8N126 398 aa5.79□□□□□ -1.48
CLCN3-201ENST00000347613 CELF5Q8N6W0 485 aaKnown RBP5.79□□□□□ -1.48
CLCN3-201ENST00000347613 FAM83FQ8NEG4 500 aaPredicted RBP5.79□□□□□ -1.48
CLCN3-201ENST00000347613 OR4A15Q8NGL6 344 aa5.79□□□□□ -1.48
CLCN3-201ENST00000347613 CHPT1Q8WUD6 406 aa5.79□□□□□ -1.48
CLCN3-201ENST00000347613 TRMT61AQ96FX7 289 aaKnown RBP5.79□□□□□ -1.48
CLCN3-201ENST00000347613 OR5M11Q96RB7 305 aa5.79□□□□□ -1.48
CLCN3-201ENST00000347613 YME1L1Q96TA2 773 aa5.79□□□□□ -1.48
CLCN3-201ENST00000347613 FAM83CQ9BQN1 747 aa5.79□□□□□ -1.48
CLCN3-201ENST00000347613 SLC6A16Q9GZN6 736 aa5.79□□□□□ -1.48
CLCN3-201ENST00000347613 OR51E2Q9H255 320 aa5.79□□□□□ -1.48
CLCN3-201ENST00000347613 RAD21L1Q9H4I0 556 aa5.79□□□□□ -1.48
CLCN3-201ENST00000347613 C8orf4Q9NR00 106 aa5.79□□□□□ -1.48
CLCN3-201ENST00000347613 CUEDC1Q9NWM3 386 aaPredicted RBP5.79□□□□□ -1.48
CLCN3-201ENST00000347613 TAAR2Q9P1P5 351 aa5.79□□□□□ -1.48
CLCN3-201ENST00000347613 PCDHGA2Q9Y5H1 932 aa5.79□□□□□ -1.48
CLCN3-201ENST00000347613 MDC1Q14676 2089 aaKnown RBP5.78□□□□□ -1.48
CLCN3-201ENST00000347613 KRBA1A5PL33 1030 aa5.78□□□□□ -1.48
CLCN3-201ENST00000347613 ZSCAN9O15535 394 aaPredicted RBP5.78□□□□□ -1.48
CLCN3-201ENST00000347613 FURINP09958 794 aa5.78□□□□□ -1.48
CLCN3-201ENST00000347613 PSMB9P28065 219 aa5.78□□□□□ -1.48
CLCN3-201ENST00000347613 PRLHRP49683 370 aa5.78□□□□□ -1.48
CLCN3-201ENST00000347613 TAS2R50P59544 299 aa5.78□□□□□ -1.48
CLCN3-201ENST00000347613 SLC13A2Q13183 592 aa5.78□□□□□ -1.48
CLCN3-201ENST00000347613 E2F2Q14209 437 aa5.78□□□□□ -1.48
CLCN3-201ENST00000347613 SLBPQ14493 270 aaKnown RBP eCLIP5.78□□□□□ -1.48
CLCN3-201ENST00000347613 ACOX1Q15067 660 aa5.78□□□□□ -1.48
CLCN3-201ENST00000347613 ZNF750Q32MQ0 723 aa5.78□□□□□ -1.48
CLCN3-201ENST00000347613 CPTPQ5TA50 214 aa5.78□□□□□ -1.48
CLCN3-201ENST00000347613 ANGPTL8Q6UXH0 198 aa5.78□□□□□ -1.48
CLCN3-201ENST00000347613 ZNF554Q86TJ5 538 aa5.78□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms