RNA–Protein interactions for RNA: ENST00000346562.6

NPAS3-201, Transcript of neuronal PAS domain protein 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene NPAS3, Length 5,847 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS3-201ENST00000346562 TOR1BO14657 336 aa22.34■■□□□ 1.17
NPAS3-201ENST00000346562 ITM2AO43736 263 aa22.34■■□□□ 1.17
NPAS3-201ENST00000346562 FPR1P21462 350 aa22.34■■□□□ 1.17
NPAS3-201ENST00000346562 DGKQP52824 942 aa22.34■■□□□ 1.17
NPAS3-201ENST00000346562 PMS2P3Q13401 168 aa22.34■■□□□ 1.17
NPAS3-201ENST00000346562 BEND4Q6ZU67 534 aa22.34■■□□□ 1.17
NPAS3-201ENST00000346562 ZNF283Q8N7M2 679 aa22.34■■□□□ 1.17
NPAS3-201ENST00000346562 OR51I1Q9H343 314 aa22.34■■□□□ 1.17
NPAS3-201ENST00000346562 GPR34Q9UPC5 381 aa22.34■■□□□ 1.17
NPAS3-201ENST00000346562 WDR45Q9Y484 360 aa22.34■■□□□ 1.17
NPAS3-201ENST00000346562 TSGA13Q96PP4 275 aa22.33■■□□□ 1.17
NPAS3-201ENST00000346562 TPT1P8Q9HAU6 139 aa22.33■■□□□ 1.17
NPAS3-201ENST00000346562 HPF1Q9NWY4 346 aa22.33■■□□□ 1.17
NPAS3-201ENST00000346562 RNF11Q9Y3C5 154 aa22.33■■□□□ 1.17
NPAS3-201ENST00000346562 SCGB2A1O75556 95 aa22.33■■□□□ 1.17
NPAS3-201ENST00000346562 MT-ND5P03915 603 aa22.33■■□□□ 1.17
NPAS3-201ENST00000346562 LY6G5CQ5SRR4 150 aa22.33■■□□□ 1.17
NPAS3-201ENST00000346562 TICAM1Q8IUC6 712 aa22.33■■□□□ 1.17
NPAS3-201ENST00000346562 NPLOC4Q8TAT6 608 aa22.33■■□□□ 1.17
NPAS3-201ENST00000346562 SHKBP1Q8TBC3 707 aa22.33■■□□□ 1.17
NPAS3-201ENST00000346562 S100A16Q96FQ6 103 aaKnown RBP22.33■■□□□ 1.17
NPAS3-201ENST00000346562 FBXL18Q96ME1 805 aa22.33■■□□□ 1.17
NPAS3-201ENST00000346562 CH25HO95992 272 aa22.33■■□□□ 1.17
NPAS3-201ENST00000346562 NPPAP01160 153 aa22.33■■□□□ 1.17
NPAS3-201ENST00000346562 ANXA3P12429 323 aa22.33■■□□□ 1.17
NPAS3-201ENST00000346562 F8A1P23610 371 aa22.33■■□□□ 1.17
NPAS3-201ENST00000346562 ZNF763Q0D2J5 394 aa22.33■■□□□ 1.17
NPAS3-201ENST00000346562 NCEH1Q6PIU2 408 aa22.33■■□□□ 1.17
NPAS3-201ENST00000346562 TAMM41Q96BW9 452 aa22.33■■□□□ 1.17
NPAS3-201ENST00000346562 SFXN1Q9H9B4 322 aa22.33■■□□□ 1.17
NPAS3-201ENST00000346562 SPATA6Q9NWH7 488 aaPredicted RBP22.33■■□□□ 1.17
NPAS3-201ENST00000346562 LOC100130705A0A1B0GUX0 176 aa22.33■■□□□ 1.16
NPAS3-201ENST00000346562 HRGP04196 525 aa22.33■■□□□ 1.16
NPAS3-201ENST00000346562 FLYWCH1Q4VC44 716 aa22.33■■□□□ 1.16
NPAS3-201ENST00000346562 M0QX08 132 aa22.33■■□□□ 1.16
NPAS3-201ENST00000346562 UFM1P61960 85 aa22.33■■□□□ 1.16
NPAS3-201ENST00000346562 TMEM115Q12893 351 aaPredicted RBP22.33■■□□□ 1.16
NPAS3-201ENST00000346562 TUBA3CQ13748 450 aa22.33■■□□□ 1.16
NPAS3-201ENST00000346562 SLC9A4Q6AI14 798 aa22.33■■□□□ 1.16
NPAS3-201ENST00000346562 SLC35F5Q8WV83 523 aa22.33■■□□□ 1.16
NPAS3-201ENST00000346562 KIAA1191Q96A73 305 aa22.33■■□□□ 1.16
NPAS3-201ENST00000346562 LRCH3Q96II8 777 aa22.33■■□□□ 1.16
NPAS3-201ENST00000346562 MGAT4BQ9UQ53 548 aa22.33■■□□□ 1.16
NPAS3-201ENST00000346562 LCHNA4D1U4 455 aa22.32■■□□□ 1.16
NPAS3-201ENST00000346562 SOCS5O75159 536 aa22.32■■□□□ 1.16
NPAS3-201ENST00000346562 STOMP27105 288 aa22.32■■□□□ 1.16
NPAS3-201ENST00000346562 ABHD18Q0P651 414 aa22.32■■□□□ 1.16
NPAS3-201ENST00000346562 RNF130Q86XS8 419 aa22.32■■□□□ 1.16
NPAS3-201ENST00000346562 FOXRED2Q8IWF2 684 aa22.32■■□□□ 1.16
NPAS3-201ENST00000346562 SLC2A11Q9BYW1 496 aa22.32■■□□□ 1.16
NPAS3-201ENST00000346562 ZNF358Q9NW07 568 aa22.32■■□□□ 1.16
NPAS3-201ENST00000346562 VNN3Q9NY84 501 aa22.32■■□□□ 1.16
NPAS3-201ENST00000346562 OR5K4A6NMS3 321 aa22.32■■□□□ 1.16
NPAS3-201ENST00000346562 DUX1O43812 170 aa22.32■■□□□ 1.16
NPAS3-201ENST00000346562 GSRP00390 522 aa22.32■■□□□ 1.16
NPAS3-201ENST00000346562 DLDP09622 509 aaKnown RBP22.32■■□□□ 1.16
NPAS3-201ENST00000346562 S100A2P29034 98 aa22.32■■□□□ 1.16
NPAS3-201ENST00000346562 VSX2P58304 361 aaPredicted RBP22.32■■□□□ 1.16
NPAS3-201ENST00000346562 RPL6Q02878 288 aaKnown RBP22.32■■□□□ 1.16
NPAS3-201ENST00000346562 ZNF805Q5CZA5 627 aa22.32■■□□□ 1.16
NPAS3-201ENST00000346562 SMG9Q9H0W8 520 aaKnown RBP22.32■■□□□ 1.16
NPAS3-201ENST00000346562 MTMR10Q9NXD2 777 aa22.32■■□□□ 1.16
NPAS3-201ENST00000346562 B4GALT6Q9UBX8 382 aa22.32■■□□□ 1.16
NPAS3-201ENST00000346562 IFNA7P01567 189 aa22.32■■□□□ 1.16
NPAS3-201ENST00000346562 EMX2Q04743 252 aa22.32■■□□□ 1.16
NPAS3-201ENST00000346562 TMEM225Q6GV28 225 aa22.32■■□□□ 1.16
NPAS3-201ENST00000346562 TMEM203Q969S6 136 aa22.32■■□□□ 1.16
NPAS3-201ENST00000346562 TMEM41AQ96HV5 264 aa22.32■■□□□ 1.16
NPAS3-201ENST00000346562 TM9SF3Q9HD45 589 aa22.32■■□□□ 1.16
NPAS3-201ENST00000346562 DNM1LO00429 736 aa22.32■■□□□ 1.16
NPAS3-201ENST00000346562 VNN2O95498 520 aa22.32■■□□□ 1.16
NPAS3-201ENST00000346562 ST3GAL4Q11206 333 aa22.32■■□□□ 1.16
NPAS3-201ENST00000346562 OGFRL1Q5TC84 451 aaPredicted RBP22.32■■□□□ 1.16
NPAS3-201ENST00000346562 TMEM198Q66K66 360 aa22.32■■□□□ 1.16
NPAS3-201ENST00000346562 ASPGQ86U10 573 aa22.32■■□□□ 1.16
NPAS3-201ENST00000346562 OSTM1Q86WC4 334 aa22.32■■□□□ 1.16
NPAS3-201ENST00000346562 CILP2Q8IUL8 1156 aa22.32■■□□□ 1.16
NPAS3-201ENST00000346562 SPAG16Q8N0X2 631 aa22.32■■□□□ 1.16
NPAS3-201ENST00000346562 WDR92Q96MX6 357 aa22.32■■□□□ 1.16
NPAS3-201ENST00000346562 CCDC86Q9H6F5 360 aaKnown RBP22.32■■□□□ 1.16
NPAS3-201ENST00000346562 NUDT15Q9NV35 164 aa22.32■■□□□ 1.16
NPAS3-201ENST00000346562 DNAJB4Q9UDY4 337 aa22.32■■□□□ 1.16
NPAS3-201ENST00000346562 MKLN1Q9UL63 735 aa22.32■■□□□ 1.16
NPAS3-201ENST00000346562 TCRBV7S3A2A0A539 114 aa22.32■■□□□ 1.16
NPAS3-201ENST00000346562 AHSGP02765 367 aa22.32■■□□□ 1.16
NPAS3-201ENST00000346562 VAMP1P23763 118 aa22.32■■□□□ 1.16
NPAS3-201ENST00000346562 ABRAXAS2Q15018 415 aa22.32■■□□□ 1.16
NPAS3-201ENST00000346562 KCNN1Q92952 543 aa22.32■■□□□ 1.16
NPAS3-201ENST00000346562 GPR22Q99680 433 aa22.32■■□□□ 1.16
NPAS3-201ENST00000346562 MLXQ9UH92 298 aa22.32■■□□□ 1.16
NPAS3-201ENST00000346562 OAZ3Q9UMX2 235 aa22.32■■□□□ 1.16
NPAS3-201ENST00000346562 RBMX2Q9Y388 322 aaKnown RBP22.32■■□□□ 1.16
NPAS3-201ENST00000346562 SLC16A5O15375 505 aa22.31■■□□□ 1.16
NPAS3-201ENST00000346562 DLX3O60479 287 aa22.31■■□□□ 1.16
NPAS3-201ENST00000346562 CREG1O75629 220 aa22.31■■□□□ 1.16
NPAS3-201ENST00000346562 CDKL4Q5MAI5 379 aa22.31■■□□□ 1.16
NPAS3-201ENST00000346562 TIGD4Q8IY51 512 aa22.31■■□□□ 1.16
NPAS3-201ENST00000346562 SUSD2Q9UGT4 822 aa22.31■■□□□ 1.16
NPAS3-201ENST00000346562 ZDHHC2Q9UIJ5 367 aa22.31■■□□□ 1.16
NPAS3-201ENST00000346562 GID4Q8IVV7 300 aa22.31■■□□□ 1.16
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms