RNA–Protein interactions for RNA: ENST00000346436.10

CLCN6-202, Transcript of chloride voltage-gated channel 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLCN6, Length 5,583 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN6-202ENST00000346436 SGCDQ92629 289 aa10.51□□□□□ -0.73
CLCN6-202ENST00000346436 MTERF1Q99551 399 aaKnown RBP10.51□□□□□ -0.73
CLCN6-202ENST00000346436 HDHD2Q9H0R4 259 aa10.51□□□□□ -0.73
CLCN6-202ENST00000346436 TMEM248Q9NWD8 314 aa10.51□□□□□ -0.73
CLCN6-202ENST00000346436 PTGFRNQ9P2B2 879 aa10.51□□□□□ -0.73
CLCN6-202ENST00000346436 KCND3Q9UK17 655 aa10.51□□□□□ -0.73
CLCN6-202ENST00000346436 SLX4Q8IY92 1834 aa10.51□□□□□ -0.73
CLCN6-202ENST00000346436 PPP6CO00743 305 aa10.51□□□□□ -0.73
CLCN6-202ENST00000346436 CHRNA6Q15825 494 aa10.51□□□□□ -0.73
CLCN6-202ENST00000346436 ZBED5Q49AG3 693 aa10.51□□□□□ -0.73
CLCN6-202ENST00000346436 SREK1IP1Q8N9Q2 155 aaPredicted RBP10.51□□□□□ -0.73
CLCN6-202ENST00000346436 PDPRQ8NCN5 879 aa10.51□□□□□ -0.73
CLCN6-202ENST00000346436 ZFAND2BQ8WV99 257 aa10.51□□□□□ -0.73
CLCN6-202ENST00000346436 UCN3Q969E3 161 aa10.51□□□□□ -0.73
CLCN6-202ENST00000346436 TOE1Q96GM8 510 aaKnown RBP10.51□□□□□ -0.73
CLCN6-202ENST00000346436 EBF1Q9UH73 591 aa10.51□□□□□ -0.73
CLCN6-202ENST00000346436 ZNF840PA6NDX5 716 aa10.5□□□□□ -0.73
CLCN6-202ENST00000346436 STX16O14662 325 aa10.5□□□□□ -0.73
CLCN6-202ENST00000346436 BRINP1O60477 761 aa10.5□□□□□ -0.73
CLCN6-202ENST00000346436 GATBO75879 557 aaKnown RBP10.5□□□□□ -0.73
CLCN6-202ENST00000346436 RNH1P13489 461 aaKnown RBP10.5□□□□□ -0.73
CLCN6-202ENST00000346436 TCN2P20062 427 aa10.5□□□□□ -0.73
CLCN6-202ENST00000346436 PIK3CBP42338 1070 aa10.5□□□□□ -0.73
CLCN6-202ENST00000346436 DCAF12Q5T6F0 453 aa10.5□□□□□ -0.73
CLCN6-202ENST00000346436 KDM1BQ8NB78 822 aa10.5□□□□□ -0.73
CLCN6-202ENST00000346436 ASB15Q8WXK1 588 aa10.5□□□□□ -0.73
CLCN6-202ENST00000346436 CGREF1Q99674 301 aa10.5□□□□□ -0.73
CLCN6-202ENST00000346436 SLC29A1Q99808 456 aa10.5□□□□□ -0.73
CLCN6-202ENST00000346436 PCDHB16Q9NRJ7 776 aa10.5□□□□□ -0.73
CLCN6-202ENST00000346436 SPEF1Q9Y4P9 236 aa10.5□□□□□ -0.73
CLCN6-202ENST00000346436 EFCAB10A6NFE3 127 aa10.5□□□□□ -0.73
CLCN6-202ENST00000346436 HAS3O00219 553 aa10.5□□□□□ -0.73
CLCN6-202ENST00000346436 CYP11A1P05108 521 aa10.5□□□□□ -0.73
CLCN6-202ENST00000346436 ZNF182P17025 639 aaPredicted RBP10.5□□□□□ -0.73
CLCN6-202ENST00000346436 CHRNB4P30926 498 aa10.5□□□□□ -0.73
CLCN6-202ENST00000346436 SH3BP2P78314 561 aa10.5□□□□□ -0.73
CLCN6-202ENST00000346436 DAG1Q14118 895 aa10.5□□□□□ -0.73
CLCN6-202ENST00000346436 OR4D1Q15615 310 aa10.5□□□□□ -0.73
CLCN6-202ENST00000346436 LRIF1Q5T3J3 769 aa10.5□□□□□ -0.73
CLCN6-202ENST00000346436 CYS1Q717R9 158 aa10.5□□□□□ -0.73
CLCN6-202ENST00000346436 CLIP4Q8N3C7 705 aa10.5□□□□□ -0.73
CLCN6-202ENST00000346436 CAMK1GQ96NX5 476 aa10.5□□□□□ -0.73
CLCN6-202ENST00000346436 AGPAT4Q9NRZ5 378 aa10.5□□□□□ -0.73
CLCN6-202ENST00000346436 ACTR3BQ9P1U1 418 aa10.5□□□□□ -0.73
CLCN6-202ENST00000346436 GMPR2Q9P2T1 348 aaKnown RBP10.5□□□□□ -0.73
CLCN6-202ENST00000346436 SDC3O75056 442 aa10.5□□□□□ -0.73
CLCN6-202ENST00000346436 CHRM5P08912 532 aaPredicted RBP10.5□□□□□ -0.73
CLCN6-202ENST00000346436 CD1DP15813 335 aa10.5□□□□□ -0.73
CLCN6-202ENST00000346436 CPOXP36551 454 aa10.5□□□□□ -0.73
CLCN6-202ENST00000346436 STC1P52823 247 aa10.5□□□□□ -0.73
CLCN6-202ENST00000346436 UBE2NP61088 152 aaKnown RBP10.5□□□□□ -0.73
CLCN6-202ENST00000346436 SHHQ15465 462 aa10.5□□□□□ -0.73
CLCN6-202ENST00000346436 GPR153Q6NV75 609 aa10.5□□□□□ -0.73
CLCN6-202ENST00000346436 SLC30A6Q6NXT4 461 aa10.5□□□□□ -0.73
CLCN6-202ENST00000346436 C11orf65Q8NCR3 313 aa10.5□□□□□ -0.73
CLCN6-202ENST00000346436 OR9A1PQ8NGU1 263 aa10.5□□□□□ -0.73
CLCN6-202ENST00000346436 LGR4Q9BXB1 951 aa10.5□□□□□ -0.73
CLCN6-202ENST00000346436 PPP4R1LQ9P1A2 415 aa10.5□□□□□ -0.73
CLCN6-202ENST00000346436 MAP4K5Q9Y4K4 846 aa10.5□□□□□ -0.73
CLCN6-202ENST00000346436 PCDHGA7Q9Y5G6 932 aa10.5□□□□□ -0.73
CLCN6-202ENST00000346436 NHSL1Q5SYE7 1610 aa10.5□□□□□ -0.73
CLCN6-202ENST00000346436 HMX2A2RU54 273 aa10.5□□□□□ -0.73
CLCN6-202ENST00000346436 A8MVJ9 347 aa10.5□□□□□ -0.73
CLCN6-202ENST00000346436 K7EPI3 171 aa10.5□□□□□ -0.73
CLCN6-202ENST00000346436 S1PR4O95977 384 aa10.5□□□□□ -0.73
CLCN6-202ENST00000346436 FABP3P05413 133 aa10.5□□□□□ -0.73
CLCN6-202ENST00000346436 CD2P06729 351 aa10.5□□□□□ -0.73
CLCN6-202ENST00000346436 FOXA1P55317 472 aa10.5□□□□□ -0.73
CLCN6-202ENST00000346436 VSX2P58304 361 aaPredicted RBP10.5□□□□□ -0.73
CLCN6-202ENST00000346436 TAZQ16635 292 aa10.5□□□□□ -0.73
CLCN6-202ENST00000346436 C18orf21Q32NC0 220 aaPredicted RBP10.5□□□□□ -0.73
CLCN6-202ENST00000346436 CST9Q5W186 159 aa10.5□□□□□ -0.73
CLCN6-202ENST00000346436 TRIQKQ629K1 86 aa10.5□□□□□ -0.73
CLCN6-202ENST00000346436 VANGL1Q8TAA9 524 aaPredicted RBP10.5□□□□□ -0.73
CLCN6-202ENST00000346436 AURKBQ96GD4 344 aaPredicted RBP10.5□□□□□ -0.73
CLCN6-202ENST00000346436 SPRTNQ9H040 489 aaPredicted RBP10.5□□□□□ -0.73
CLCN6-202ENST00000346436 ASB6Q9NWX5 421 aa10.5□□□□□ -0.73
CLCN6-202ENST00000346436 HPF1Q9NWY4 346 aa10.5□□□□□ -0.73
CLCN6-202ENST00000346436 ZNF282Q9UDV7 671 aaPredicted RBP10.5□□□□□ -0.73
CLCN6-202ENST00000346436 PLCL2Q9UPR0 1127 aa10.5□□□□□ -0.73
CLCN6-202ENST00000346436 WASF3Q9UPY6 502 aa10.5□□□□□ -0.73
CLCN6-202ENST00000346436 HCFC2Q9Y5Z7 792 aa10.5□□□□□ -0.73
CLCN6-202ENST00000346436 A0A1W2PP18 115 aa10.5□□□□□ -0.73
CLCN6-202ENST00000346436 OR6C74A6NCV1 312 aa10.5□□□□□ -0.73
CLCN6-202ENST00000346436 RGS10O43665 173 aa10.5□□□□□ -0.73
CLCN6-202ENST00000346436 OAZ2O95190 189 aa10.5□□□□□ -0.73
CLCN6-202ENST00000346436 IFNW1P05000 195 aa10.5□□□□□ -0.73
CLCN6-202ENST00000346436 ITGB1P05556 798 aa10.5□□□□□ -0.73
CLCN6-202ENST00000346436 GLDCP23378 1020 aa10.5□□□□□ -0.73
CLCN6-202ENST00000346436 DNAJB13P59910 316 aa10.5□□□□□ -0.73
CLCN6-202ENST00000346436 ZNF33AQ06730 810 aa10.5□□□□□ -0.73
CLCN6-202ENST00000346436 KCNC3Q14003 757 aa10.5□□□□□ -0.73
CLCN6-202ENST00000346436 DSG2Q14126 1118 aa10.5□□□□□ -0.73
CLCN6-202ENST00000346436 GBX1Q14549 363 aa10.5□□□□□ -0.73
CLCN6-202ENST00000346436 SPIN4Q56A73 249 aa10.5□□□□□ -0.73
CLCN6-202ENST00000346436 TMPRSS11AQ6ZMR5 421 aa10.5□□□□□ -0.73
CLCN6-202ENST00000346436 TSEN15Q8WW01 171 aaKnown RBP10.5□□□□□ -0.73
CLCN6-202ENST00000346436 MS4A4AQ96JQ5 239 aa10.5□□□□□ -0.73
CLCN6-202ENST00000346436 C1orf74Q96LT6 269 aa10.5□□□□□ -0.73
CLCN6-202ENST00000346436 FER1L6-AS2Q96M78 137 aa10.5□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms