RNA–Protein interactions for RNA: ENST00000345356.10

COL12A1-202, Transcript of collagen type XII alpha 1 chain, humanhuman

TSL 1 (best) BASIC

Gene COL12A1, Length 5,886 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL12A1-202ENST00000345356 A0A096LPI6 279 aa11.71□□□□□ -0.53
COL12A1-202ENST00000345356 A0A1W2PQ09 198 aa11.71□□□□□ -0.53
COL12A1-202ENST00000345356 MAP3K8P41279 467 aa11.71□□□□□ -0.53
COL12A1-202ENST00000345356 GPR19Q15760 415 aa11.71□□□□□ -0.53
COL12A1-202ENST00000345356 SLC10A6Q3KNW5 377 aa11.71□□□□□ -0.53
COL12A1-202ENST00000345356 SFRP4Q6FHJ7 346 aaPredicted RBP11.71□□□□□ -0.53
COL12A1-202ENST00000345356 HSDL2Q6YN16 418 aa11.71□□□□□ -0.53
COL12A1-202ENST00000345356 NPAS3Q8IXF0 933 aa11.71□□□□□ -0.53
COL12A1-202ENST00000345356 PTPN18Q99952 460 aa11.71□□□□□ -0.53
COL12A1-202ENST00000345356 CD84Q9UIB8 345 aa11.71□□□□□ -0.53
COL12A1-202ENST00000345356 PRKCGP05129 697 aa11.71□□□□□ -0.54
COL12A1-202ENST00000345356 TACSTD2P09758 323 aa11.71□□□□□ -0.54
COL12A1-202ENST00000345356 GIMD1P0DJR0 217 aa11.71□□□□□ -0.54
COL12A1-202ENST00000345356 SMIM18P0DKX4 95 aa11.71□□□□□ -0.54
COL12A1-202ENST00000345356 SMIM10L2AP0DMW4 78 aa11.71□□□□□ -0.54
COL12A1-202ENST00000345356 SMIM10L2BP0DMW5 78 aa11.71□□□□□ -0.54
COL12A1-202ENST00000345356 CAPN3P20807 821 aa11.71□□□□□ -0.54
COL12A1-202ENST00000345356 ITPKBP27987 946 aa11.71□□□□□ -0.54
COL12A1-202ENST00000345356 GCAP28676 217 aa11.71□□□□□ -0.54
COL12A1-202ENST00000345356 CPOXP36551 454 aa11.71□□□□□ -0.54
COL12A1-202ENST00000345356 TAS2R43P59537 309 aa11.71□□□□□ -0.54
COL12A1-202ENST00000345356 SMAD3P84022 425 aaKnown RBP11.71□□□□□ -0.54
COL12A1-202ENST00000345356 STEAP4Q687X5 459 aa11.71□□□□□ -0.54
COL12A1-202ENST00000345356 MTFR2Q6P444 385 aa11.71□□□□□ -0.54
COL12A1-202ENST00000345356 CEACAM20Q6UY09 585 aa11.71□□□□□ -0.54
COL12A1-202ENST00000345356 YIPF4Q9BSR8 244 aa11.71□□□□□ -0.54
COL12A1-202ENST00000345356 SCP2D1Q9UJQ7 156 aa11.71□□□□□ -0.54
COL12A1-202ENST00000345356 MAFBQ9Y5Q3 323 aaPredicted RBP11.71□□□□□ -0.54
COL12A1-202ENST00000345356 CLTCQ00610 1675 aaKnown RBP11.71□□□□□ -0.54
COL12A1-202ENST00000345356 WNT10BO00744 389 aa11.71□□□□□ -0.54
COL12A1-202ENST00000345356 VNN2O95498 520 aa11.71□□□□□ -0.54
COL12A1-202ENST00000345356 NUDT7P0C024 238 aa11.71□□□□□ -0.54
COL12A1-202ENST00000345356 DRD5P21918 477 aa11.71□□□□□ -0.54
COL12A1-202ENST00000345356 KDELR2P33947 212 aa11.71□□□□□ -0.54
COL12A1-202ENST00000345356 NSG1P42857 185 aa11.71□□□□□ -0.54
COL12A1-202ENST00000345356 C1QTNF8P60827 252 aa11.71□□□□□ -0.54
COL12A1-202ENST00000345356 TAGLNQ01995 201 aaKnown RBP11.71□□□□□ -0.54
COL12A1-202ENST00000345356 TAF10Q12962 218 aa11.71□□□□□ -0.54
COL12A1-202ENST00000345356 PPIGQ13427 754 aaKnown RBP eCLIP11.71□□□□□ -0.54
COL12A1-202ENST00000345356 GRIN2CQ14957 1233 aa11.71□□□□□ -0.54
COL12A1-202ENST00000345356 PROX2Q3B8N5 592 aa11.71□□□□□ -0.54
COL12A1-202ENST00000345356 CATSPERGQ6ZRH7 1159 aa11.71□□□□□ -0.54
COL12A1-202ENST00000345356 LRP10Q7Z4F1 713 aa11.71□□□□□ -0.54
COL12A1-202ENST00000345356 LHFPL3Q86UP9 236 aa11.71□□□□□ -0.54
COL12A1-202ENST00000345356 ZNF227Q86WZ6 799 aa11.71□□□□□ -0.54
COL12A1-202ENST00000345356 CADM3Q8N126 398 aa11.71□□□□□ -0.54
COL12A1-202ENST00000345356 ZFP41Q8N8Y5 198 aa11.71□□□□□ -0.54
COL12A1-202ENST00000345356 SHKBP1Q8TBC3 707 aa11.71□□□□□ -0.54
COL12A1-202ENST00000345356 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP11.71□□□□□ -0.54
COL12A1-202ENST00000345356 OR2S2Q9NQN1 319 aa11.71□□□□□ -0.54
COL12A1-202ENST00000345356 FBXW2Q9UKT8 454 aa11.71□□□□□ -0.54
COL12A1-202ENST00000345356 A0A1B0GVI7 797 aa11.7□□□□□ -0.54
COL12A1-202ENST00000345356 STK25O00506 426 aa11.7□□□□□ -0.54
COL12A1-202ENST00000345356 RBMXL2O75526 392 aaKnown RBP11.7□□□□□ -0.54
COL12A1-202ENST00000345356 FHP07954 510 aa11.7□□□□□ -0.54
COL12A1-202ENST00000345356 ELFN1P0C7U0 828 aa11.7□□□□□ -0.54
COL12A1-202ENST00000345356 HOXD10P28358 340 aa11.7□□□□□ -0.54
COL12A1-202ENST00000345356 VLDLRP98155 873 aa11.7□□□□□ -0.54
COL12A1-202ENST00000345356 CBFBQ13951 182 aa11.7□□□□□ -0.54
COL12A1-202ENST00000345356 OR51G2Q8NGK0 314 aa11.7□□□□□ -0.54
COL12A1-202ENST00000345356 ADAMTS16Q8TE57 1224 aa11.7□□□□□ -0.54
COL12A1-202ENST00000345356 CPNE2Q96FN4 548 aaPredicted RBP11.7□□□□□ -0.54
COL12A1-202ENST00000345356 CYP2S1Q96SQ9 504 aa11.7□□□□□ -0.54
COL12A1-202ENST00000345356 TM9SF2Q99805 663 aa11.7□□□□□ -0.54
COL12A1-202ENST00000345356 DOHHQ9BU89 302 aa11.7□□□□□ -0.54
COL12A1-202ENST00000345356 HDHD5Q9BXW7 423 aa11.7□□□□□ -0.54
COL12A1-202ENST00000345356 ABHD16BQ9H3Z7 469 aa11.7□□□□□ -0.54
COL12A1-202ENST00000345356 NSUN3Q9H649 340 aaKnown RBP11.7□□□□□ -0.54
COL12A1-202ENST00000345356 FANCFQ9NPI8 374 aa11.7□□□□□ -0.54
COL12A1-202ENST00000345356 CFAP97Q9P2B7 532 aa11.7□□□□□ -0.54
COL12A1-202ENST00000345356 ACSL5Q9ULC5 683 aa11.7□□□□□ -0.54
COL12A1-202ENST00000345356 J3KR12 359 aa11.7□□□□□ -0.54
COL12A1-202ENST00000345356 WNT9AO14904 365 aa11.7□□□□□ -0.54
COL12A1-202ENST00000345356 ARPC5O15511 151 aa11.7□□□□□ -0.54
COL12A1-202ENST00000345356 SPDEFO95238 335 aa11.7□□□□□ -0.54
COL12A1-202ENST00000345356 ZBTB7AO95365 584 aa11.7□□□□□ -0.54
COL12A1-202ENST00000345356 IFNA21P01568 189 aa11.7□□□□□ -0.54
COL12A1-202ENST00000345356 DCTP40126 519 aa11.7□□□□□ -0.54
COL12A1-202ENST00000345356 HCAR3P49019 387 aa11.7□□□□□ -0.54
COL12A1-202ENST00000345356 CREB5Q02930 508 aa11.7□□□□□ -0.54
COL12A1-202ENST00000345356 SP140Q13342 867 aa11.7□□□□□ -0.54
COL12A1-202ENST00000345356 NDUFAF5Q5TEU4 345 aa11.7□□□□□ -0.54
COL12A1-202ENST00000345356 RPL10LQ96L21 214 aaKnown RBP11.7□□□□□ -0.54
COL12A1-202ENST00000345356 SNX18Q96RF0 628 aa11.7□□□□□ -0.54
COL12A1-202ENST00000345356 ZNF436Q9C0F3 470 aaPredicted RBP11.7□□□□□ -0.54
COL12A1-202ENST00000345356 PRMT8Q9NR22 394 aaPredicted RBP11.7□□□□□ -0.54
COL12A1-202ENST00000345356 ACTR10Q9NZ32 417 aa11.7□□□□□ -0.54
COL12A1-202ENST00000345356 GSKIPQ9P0R6 139 aa11.7□□□□□ -0.54
COL12A1-202ENST00000345356 MYO5BQ9ULV0 1848 aa11.7□□□□□ -0.54
COL12A1-202ENST00000345356 STMND1H3BQB6 276 aa11.7□□□□□ -0.54
COL12A1-202ENST00000345356 AP1G1O43747 822 aa11.7□□□□□ -0.54
COL12A1-202ENST00000345356 PCDHGA12O60330 932 aa11.7□□□□□ -0.54
COL12A1-202ENST00000345356 FMO6PO60774 539 aa11.7□□□□□ -0.54
COL12A1-202ENST00000345356 CAPN15O75808 1086 aa11.7□□□□□ -0.54
COL12A1-202ENST00000345356 SSTR2P30874 369 aa11.7□□□□□ -0.54
COL12A1-202ENST00000345356 CRISP1P54107 249 aa11.7□□□□□ -0.54
COL12A1-202ENST00000345356 GK2Q14410 553 aaPredicted RBP11.7□□□□□ -0.54
COL12A1-202ENST00000345356 PGM2L1Q6PCE3 622 aa11.7□□□□□ -0.54
COL12A1-202ENST00000345356 NRARPQ7Z6K4 114 aa11.7□□□□□ -0.54
COL12A1-202ENST00000345356 RNF180Q86T96 592 aa11.7□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms