RNA–Protein interactions for RNA: ENST00000342494.7

UBE3B-202, Transcript of ubiquitin protein ligase E3B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBE3B, Length 5,722 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-202ENST00000342494 PLCXD2Q0VAA5 305 aa14.49□□□□□ -0.09
UBE3B-202ENST00000342494 OGFOD2Q6N063 350 aa14.49□□□□□ -0.09
UBE3B-202ENST00000342494 ZNF613Q6PF04 617 aa14.49□□□□□ -0.09
UBE3B-202ENST00000342494 USP43Q70EL4 1123 aa14.49□□□□□ -0.09
UBE3B-202ENST00000342494 ZNF550Q7Z398 422 aa14.49□□□□□ -0.09
UBE3B-202ENST00000342494 CCDC116Q8IYX3 515 aa14.49□□□□□ -0.09
UBE3B-202ENST00000342494 ZNF611Q8N823 705 aa14.49□□□□□ -0.09
UBE3B-202ENST00000342494 GATSQ8NAP1 163 aa14.49□□□□□ -0.09
UBE3B-202ENST00000342494 C9orf43Q8TAL5 461 aaPredicted RBP14.49□□□□□ -0.09
UBE3B-202ENST00000342494 ACOT12Q8WYK0 555 aa14.49□□□□□ -0.09
UBE3B-202ENST00000342494 NR4A3Q92570 626 aa14.49□□□□□ -0.09
UBE3B-202ENST00000342494 TSACCQ96A04 125 aaPredicted RBP14.49□□□□□ -0.09
UBE3B-202ENST00000342494 MNTQ99583 582 aa14.49□□□□□ -0.09
UBE3B-202ENST00000342494 TSSK6Q9BXA6 273 aa14.49□□□□□ -0.09
UBE3B-202ENST00000342494 ADAMTS10Q9H324 1103 aa14.49□□□□□ -0.09
UBE3B-202ENST00000342494 RMI1Q9H9A7 625 aa14.49□□□□□ -0.09
UBE3B-202ENST00000342494 TMEM5Q9Y2B1 443 aa14.49□□□□□ -0.09
UBE3B-202ENST00000342494 APBB3O95704 486 aa14.48□□□□□ -0.09
UBE3B-202ENST00000342494 RAB36O95755 333 aa14.48□□□□□ -0.09
UBE3B-202ENST00000342494 SLC6A4P31645 630 aa14.48□□□□□ -0.09
UBE3B-202ENST00000342494 PMS2P3Q13401 168 aa14.48□□□□□ -0.09
UBE3B-202ENST00000342494 AQP11Q8NBQ7 271 aa14.48□□□□□ -0.09
UBE3B-202ENST00000342494 FAM3CQ92520 227 aa14.48□□□□□ -0.09
UBE3B-202ENST00000342494 IGSF8Q969P0 613 aa14.48□□□□□ -0.09
UBE3B-202ENST00000342494 GAL3ST3Q96A11 431 aa14.48□□□□□ -0.09
UBE3B-202ENST00000342494 TRIM36Q9NQ86 728 aa14.48□□□□□ -0.09
UBE3B-202ENST00000342494 TIGARQ9NQ88 270 aa14.48□□□□□ -0.09
UBE3B-202ENST00000342494 PPP4R1LQ9P1A2 415 aa14.48□□□□□ -0.09
UBE3B-202ENST00000342494 PRAMEF33A0A0G2JMD5 474 aa14.48□□□□□ -0.09
UBE3B-202ENST00000342494 HTR3EA5X5Y0 456 aa14.48□□□□□ -0.09
UBE3B-202ENST00000342494 PRAMEF10O60809 474 aa14.48□□□□□ -0.09
UBE3B-202ENST00000342494 RAB39AQ14964 217 aa14.48□□□□□ -0.09
UBE3B-202ENST00000342494 ASTE1Q2TB18 679 aaPredicted RBP14.48□□□□□ -0.09
UBE3B-202ENST00000342494 DEFB134Q4QY38 66 aa14.48□□□□□ -0.09
UBE3B-202ENST00000342494 DCAF12L1Q5VU92 463 aa14.48□□□□□ -0.09
UBE3B-202ENST00000342494 PYHIN1Q6K0P9 492 aa14.48□□□□□ -0.09
UBE3B-202ENST00000342494 TMPPEQ6ZT21 453 aa14.48□□□□□ -0.09
UBE3B-202ENST00000342494 MFSD2AQ8NA29 543 aa14.48□□□□□ -0.09
UBE3B-202ENST00000342494 KCTD7Q96MP8 289 aa14.48□□□□□ -0.09
UBE3B-202ENST00000342494 PEBP4Q96S96 227 aa14.48□□□□□ -0.09
UBE3B-202ENST00000342494 SP140LQ9H930 580 aa14.48□□□□□ -0.09
UBE3B-202ENST00000342494 FZD3Q9NPG1 666 aa14.48□□□□□ -0.09
UBE3B-202ENST00000342494 CYTH4Q9UIA0 394 aa14.48□□□□□ -0.09
UBE3B-202ENST00000342494 OR14I1A6ND48 311 aa14.48□□□□□ -0.09
UBE3B-202ENST00000342494 METTL21EPA6NDL7 271 aa14.48□□□□□ -0.09
UBE3B-202ENST00000342494 MYADML2A6NDP7 307 aa14.48□□□□□ -0.09
UBE3B-202ENST00000342494 NPC1O15118 1278 aa14.48□□□□□ -0.09
UBE3B-202ENST00000342494 TIMP1P01033 207 aa14.48□□□□□ -0.09
UBE3B-202ENST00000342494 ZNF865P0CJ78 1059 aaPredicted RBP14.48□□□□□ -0.09
UBE3B-202ENST00000342494 JUPP14923 745 aa14.48□□□□□ -0.09
UBE3B-202ENST00000342494 HK1P19367 917 aa14.48□□□□□ -0.09
UBE3B-202ENST00000342494 C5AR1P21730 350 aa14.48□□□□□ -0.09
UBE3B-202ENST00000342494 RAB28P51157 221 aa14.48□□□□□ -0.09
UBE3B-202ENST00000342494 EMX2Q04743 252 aa14.48□□□□□ -0.09
UBE3B-202ENST00000342494 ABHD18Q0P651 414 aa14.48□□□□□ -0.09
UBE3B-202ENST00000342494 ZFP69Q49AA0 526 aa14.48□□□□□ -0.09
UBE3B-202ENST00000342494 C10orf62Q5T681 223 aaPredicted RBP14.48□□□□□ -0.09
UBE3B-202ENST00000342494 MARCH9Q86YJ5 346 aa14.48□□□□□ -0.09
UBE3B-202ENST00000342494 NAT14Q8WUY8 206 aa14.48□□□□□ -0.09
UBE3B-202ENST00000342494 HSPBAP1Q96EW2 488 aa14.48□□□□□ -0.09
UBE3B-202ENST00000342494 TTYH2Q9BSA4 534 aa14.48□□□□□ -0.09
UBE3B-202ENST00000342494 REEP4Q9H6H4 257 aa14.48□□□□□ -0.09
UBE3B-202ENST00000342494 PCDHB16Q9NRJ7 776 aa14.48□□□□□ -0.09
UBE3B-202ENST00000342494 VILLO15195 856 aa14.48□□□□□ -0.09
UBE3B-202ENST00000342494 GPR32O75388 356 aa14.48□□□□□ -0.09
UBE3B-202ENST00000342494 SEMA4FO95754 770 aa14.48□□□□□ -0.09
UBE3B-202ENST00000342494 C1GALT1C1LP0DN25 315 aa14.48□□□□□ -0.09
UBE3B-202ENST00000342494 KCNC1P48547 511 aa14.48□□□□□ -0.09
UBE3B-202ENST00000342494 SLC3A1Q07837 685 aa14.48□□□□□ -0.09
UBE3B-202ENST00000342494 ODF4Q2M2E3 257 aa14.48□□□□□ -0.09
UBE3B-202ENST00000342494 KHDC1Q4VXA5 237 aaKnown RBP14.48□□□□□ -0.09
UBE3B-202ENST00000342494 ACSBG2Q5FVE4 666 aa14.48□□□□□ -0.09
UBE3B-202ENST00000342494 LIN28BQ6ZN17 250 aaKnown RBP eCLIP14.48□□□□□ -0.09
UBE3B-202ENST00000342494 RNF111Q6ZNA4 994 aa14.48□□□□□ -0.09
UBE3B-202ENST00000342494 OR4K1Q8NGD4 311 aa14.48□□□□□ -0.09
UBE3B-202ENST00000342494 RAB8BQ92930 207 aa14.48□□□□□ -0.09
UBE3B-202ENST00000342494 ASB9Q96DX5 294 aa14.48□□□□□ -0.09
UBE3B-202ENST00000342494 HSH2DQ96JZ2 352 aa14.48□□□□□ -0.09
UBE3B-202ENST00000342494 ALPK1Q96QP1 1244 aa14.48□□□□□ -0.09
UBE3B-202ENST00000342494 POPDC3Q9HBV1 291 aa14.48□□□□□ -0.09
UBE3B-202ENST00000342494 NLGN3Q9NZ94 848 aa14.48□□□□□ -0.09
UBE3B-202ENST00000342494 SLCO3A1Q9UIG8 710 aa14.48□□□□□ -0.09
UBE3B-202ENST00000342494 GNG8Q9UK08 70 aa14.48□□□□□ -0.09
UBE3B-202ENST00000342494 UBR1Q8IWV7 1749 aa14.48□□□□□ -0.09
UBE3B-202ENST00000342494 ROBO1Q9Y6N7 1651 aa14.48□□□□□ -0.09
UBE3B-202ENST00000342494 KDM4BO94953 1096 aa14.48□□□□□ -0.09
UBE3B-202ENST00000342494 FOXN2P32314 431 aa14.48□□□□□ -0.09
UBE3B-202ENST00000342494 GABRA3P34903 492 aa14.48□□□□□ -0.09
UBE3B-202ENST00000342494 TYSND1Q2T9J0 566 aa14.48□□□□□ -0.09
UBE3B-202ENST00000342494 FBXO43Q4G163 708 aa14.48□□□□□ -0.09
UBE3B-202ENST00000342494 ALG10Q5BKT4 473 aa14.48□□□□□ -0.09
UBE3B-202ENST00000342494 TTLL10Q6ZVT0 673 aa14.48□□□□□ -0.09
UBE3B-202ENST00000342494 PLXDC1Q8IUK5 500 aa14.48□□□□□ -0.09
UBE3B-202ENST00000342494 CSNK1A1LQ8N752 337 aa14.48□□□□□ -0.09
UBE3B-202ENST00000342494 PLEKHO2Q8TD55 490 aa14.48□□□□□ -0.09
UBE3B-202ENST00000342494 BORCS8Q96FH0 119 aa14.48□□□□□ -0.09
UBE3B-202ENST00000342494 LRCH3Q96II8 777 aa14.48□□□□□ -0.09
UBE3B-202ENST00000342494 MCHR1Q99705 422 aa14.48□□□□□ -0.09
UBE3B-202ENST00000342494 MAPKAP1Q9BPZ7 522 aa14.48□□□□□ -0.09
UBE3B-202ENST00000342494 TEX264Q9Y6I9 313 aa14.48□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms