RNA–Protein interactions for RNA: ENST00000336873.9

HPS4-201, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

APPRIS P1 TSL 5 BASIC

Gene HPS4, Length 3,786 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-201ENST00000336873 COMMD3Q9UBI1 195 aa7.92□□□□□ -1.14
HPS4-201ENST00000336873 GTF2A1LQ9UNN4 478 aa7.92□□□□□ -1.14
HPS4-201ENST00000336873 ERGIC3Q9Y282 383 aa7.92□□□□□ -1.14
HPS4-201ENST00000336873 NCOR1O75376 2440 aa7.92□□□□□ -1.14
HPS4-201ENST00000336873 OR52A4PA6NMU1 304 aa7.92□□□□□ -1.14
HPS4-201ENST00000336873 WWP2O00308 870 aa7.92□□□□□ -1.14
HPS4-201ENST00000336873 ACOX3O15254 700 aa7.92□□□□□ -1.14
HPS4-201ENST00000336873 UGT2B11O75310 529 aa7.92□□□□□ -1.14
HPS4-201ENST00000336873 GNRH1P01148 92 aa7.92□□□□□ -1.14
HPS4-201ENST00000336873 IFNW1P05000 195 aa7.92□□□□□ -1.14
HPS4-201ENST00000336873 RHOP08100 348 aa7.92□□□□□ -1.14
HPS4-201ENST00000336873 IGFBP1P08833 259 aaPredicted RBP7.92□□□□□ -1.14
HPS4-201ENST00000336873 SLC35G4P0C7Q5 338 aa7.92□□□□□ -1.14
HPS4-201ENST00000336873 ATP4BP51164 291 aa7.92□□□□□ -1.14
HPS4-201ENST00000336873 CLCN4P51793 760 aa7.92□□□□□ -1.14
HPS4-201ENST00000336873 CTBSQ01459 385 aa7.92□□□□□ -1.14
HPS4-201ENST00000336873 NPRL3Q12980 569 aa7.92□□□□□ -1.14
HPS4-201ENST00000336873 PIN1Q13526 163 aaPredicted RBP7.92□□□□□ -1.14
HPS4-201ENST00000336873 CAMK1Q14012 370 aa7.92□□□□□ -1.14
HPS4-201ENST00000336873 SLC35F1Q5T1Q4 408 aa7.92□□□□□ -1.14
HPS4-201ENST00000336873 GCNT6Q5T4J0 391 aa7.92□□□□□ -1.14
HPS4-201ENST00000336873 ZNF57Q68EA5 555 aaPredicted RBP7.92□□□□□ -1.14
HPS4-201ENST00000336873 KIAA1161Q6NSJ0 714 aa7.92□□□□□ -1.14
HPS4-201ENST00000336873 SPRED2Q7Z698 418 aa7.92□□□□□ -1.14
HPS4-201ENST00000336873 UBE2Q1Q7Z7E8 422 aa7.92□□□□□ -1.14
HPS4-201ENST00000336873 PHYKPLQ8IUZ5 450 aa7.92□□□□□ -1.14
HPS4-201ENST00000336873 NPAS3Q8IXF0 933 aa7.92□□□□□ -1.14
HPS4-201ENST00000336873 OR5AR1Q8NGP9 310 aa7.92□□□□□ -1.14
HPS4-201ENST00000336873 GPR150Q8NGU9 434 aa7.92□□□□□ -1.14
HPS4-201ENST00000336873 IRF7Q92985 503 aa7.92□□□□□ -1.14
HPS4-201ENST00000336873 MAGEB10Q96LZ2 347 aaPredicted RBP7.92□□□□□ -1.14
HPS4-201ENST00000336873 GAL3ST1Q99999 423 aa7.92□□□□□ -1.14
HPS4-201ENST00000336873 POLR2J2Q9GZM3 115 aaKnown RBP7.92□□□□□ -1.14
HPS4-201ENST00000336873 KAT8Q9H7Z6 458 aaKnown RBP7.92□□□□□ -1.14
HPS4-201ENST00000336873 RLIMQ9NVW2 624 aa7.92□□□□□ -1.14
HPS4-201ENST00000336873 VNN3Q9NY84 501 aa7.92□□□□□ -1.14
HPS4-201ENST00000336873 KLHL3Q9UH77 587 aa7.92□□□□□ -1.14
HPS4-201ENST00000336873 PTBP2Q9UKA9 531 aaKnown RBP7.92□□□□□ -1.14
HPS4-201ENST00000336873 RIMKLBQ9ULI2 386 aa7.92□□□□□ -1.14
HPS4-201ENST00000336873 PPT2Q9UMR5 302 aa7.92□□□□□ -1.14
HPS4-201ENST00000336873 N6AMT1Q9Y5N5 214 aa7.92□□□□□ -1.14
HPS4-201ENST00000336873 CACNA1EQ15878 2313 aa7.92□□□□□ -1.14
HPS4-201ENST00000336873 A0A1W2PPK0 400 aa7.91□□□□□ -1.14
HPS4-201ENST00000336873 A6NL46 340 aa7.91□□□□□ -1.14
HPS4-201ENST00000336873 TSPAN9O75954 239 aa7.91□□□□□ -1.14
HPS4-201ENST00000336873 FHP07954 510 aa7.91□□□□□ -1.14
HPS4-201ENST00000336873 EPCAMP16422 314 aa7.91□□□□□ -1.14
HPS4-201ENST00000336873 GADD45AP24522 165 aa7.91□□□□□ -1.14
HPS4-201ENST00000336873 HOXD11P31277 338 aaPredicted RBP7.91□□□□□ -1.14
HPS4-201ENST00000336873 HBA1P69905 142 aa7.91□□□□□ -1.14
HPS4-201ENST00000336873 ZNF846Q147U1 533 aa7.91□□□□□ -1.14
HPS4-201ENST00000336873 ZNF542PQ5EBM4 170 aa7.91□□□□□ -1.14
HPS4-201ENST00000336873 PDZK1Q5T2W1 519 aa7.91□□□□□ -1.14
HPS4-201ENST00000336873 DSG4Q86SJ6 1040 aa7.91□□□□□ -1.14
HPS4-201ENST00000336873 AADATQ8N5Z0 425 aa7.91□□□□□ -1.14
HPS4-201ENST00000336873 C10orf53Q8N6V4 93 aa7.91□□□□□ -1.14
HPS4-201ENST00000336873 LEMD2Q8NC56 503 aa7.91□□□□□ -1.14
HPS4-201ENST00000336873 POF1BQ8WVV4 589 aa7.91□□□□□ -1.14
HPS4-201ENST00000336873 ATL1Q8WXF7 558 aa7.91□□□□□ -1.14
HPS4-201ENST00000336873 PHF21AQ96BD5 680 aa7.91□□□□□ -1.14
HPS4-201ENST00000336873 FNDC11Q9BVV2 318 aa7.91□□□□□ -1.14
HPS4-201ENST00000336873 RBCK1Q9BYM8 510 aa7.91□□□□□ -1.14
HPS4-201ENST00000336873 PDFQ9HBH1 243 aa7.91□□□□□ -1.14
HPS4-201ENST00000336873 DPP7Q9UHL4 492 aa7.91□□□□□ -1.14
HPS4-201ENST00000336873 PMF1-BGLAPU3KQ54 211 aa7.91□□□□□ -1.14
HPS4-201ENST00000336873 TAF4O00268 1085 aa7.91□□□□□ -1.14
HPS4-201ENST00000336873 PCDH17O14917 1159 aa7.91□□□□□ -1.14
HPS4-201ENST00000336873 PPM1DO15297 605 aa7.91□□□□□ -1.14
HPS4-201ENST00000336873 ASNA1O43681 348 aa7.91□□□□□ -1.14
HPS4-201ENST00000336873 ETHE1O95571 254 aa7.91□□□□□ -1.14
HPS4-201ENST00000336873 C8GP07360 202 aa7.91□□□□□ -1.14
HPS4-201ENST00000336873 NAT2P11245 290 aa7.91□□□□□ -1.14
HPS4-201ENST00000336873 PPP2R1BP30154 601 aa7.91□□□□□ -1.14
HPS4-201ENST00000336873 CENPAP49450 140 aa7.91□□□□□ -1.14
HPS4-201ENST00000336873 CCR4P51679 360 aa7.91□□□□□ -1.14
HPS4-201ENST00000336873 CLDN8P56748 225 aa7.91□□□□□ -1.14
HPS4-201ENST00000336873 DEFA1P59665 94 aa7.91□□□□□ -1.14
HPS4-201ENST00000336873 DEFA3P59666 94 aa7.91□□□□□ -1.14
HPS4-201ENST00000336873 SRSF11Q05519 484 aaKnown RBP7.91□□□□□ -1.14
HPS4-201ENST00000336873 ELMSAN1Q6PJG2 1045 aa7.91□□□□□ -1.14
HPS4-201ENST00000336873 TMIGD1Q6UXZ0 262 aa7.91□□□□□ -1.14
HPS4-201ENST00000336873 CCDC149Q6ZUS6 474 aa7.91□□□□□ -1.14
HPS4-201ENST00000336873 SPATC1Q76KD6 591 aa7.91□□□□□ -1.14
HPS4-201ENST00000336873 FAM9CQ8IZT9 166 aa7.91□□□□□ -1.14
HPS4-201ENST00000336873 SLC7A5P1Q8MH63 180 aa7.91□□□□□ -1.14
HPS4-201ENST00000336873 PACRGLQ8N7B6 248 aa7.91□□□□□ -1.14
HPS4-201ENST00000336873 NTN4Q9HB63 628 aa7.91□□□□□ -1.14
HPS4-201ENST00000336873 TMED5Q9Y3A6 229 aa7.91□□□□□ -1.14
HPS4-201ENST00000336873 PSME4Q14997 1843 aa7.91□□□□□ -1.14
HPS4-201ENST00000336873 SH3PXD2BA1X283 911 aa7.91□□□□□ -1.14
HPS4-201ENST00000336873 SDHBP21912 280 aa7.91□□□□□ -1.14
HPS4-201ENST00000336873 AOAHP28039 575 aa7.91□□□□□ -1.14
HPS4-201ENST00000336873 TIE1P35590 1138 aa7.91□□□□□ -1.14
HPS4-201ENST00000336873 DAPP51397 102 aa7.91□□□□□ -1.14
HPS4-201ENST00000336873 COPZ1P61923 177 aa7.91□□□□□ -1.14
HPS4-201ENST00000336873 MAP4K2Q12851 820 aa7.91□□□□□ -1.14
HPS4-201ENST00000336873 APOFQ13790 326 aa7.91□□□□□ -1.14
HPS4-201ENST00000336873 TCTN1Q2MV58 587 aa7.91□□□□□ -1.14
HPS4-201ENST00000336873 IFI44LQ53G44 452 aa7.91□□□□□ -1.14
HPS4-201ENST00000336873 EEF1AKMT2Q5JPI9 291 aaKnown RBP7.91□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms