RNA–Protein interactions for RNA: ENST00000330188.13

TPM3-206, Transcript of tropomyosin 3, humanhuman

TSL 1 (best) BASIC

Gene TPM3, Length 2,108 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-206ENST00000330188 ADGRD2Q7Z7M1 963 aa13.96□□□□□ -0.18
TPM3-206ENST00000330188 PDZD3Q86UT5 571 aa13.96□□□□□ -0.18
TPM3-206ENST00000330188 PHF6Q8IWS0 365 aaKnown RBP eCLIP13.96□□□□□ -0.18
TPM3-206ENST00000330188 PHOSPHO2Q8TCD6 241 aa13.96□□□□□ -0.18
TPM3-206ENST00000330188 FAR1Q8WVX9 515 aa13.96□□□□□ -0.18
TPM3-206ENST00000330188 HERVK_113Q902F9 699 aa13.96□□□□□ -0.18
TPM3-206ENST00000330188 ERLEC1Q96DZ1 483 aa13.96□□□□□ -0.18
TPM3-206ENST00000330188 ASB16Q96NS5 453 aa13.96□□□□□ -0.18
TPM3-206ENST00000330188 PITX2Q99697 317 aa13.96□□□□□ -0.18
TPM3-206ENST00000330188 APOL4Q9BPW4 351 aa13.96□□□□□ -0.18
TPM3-206ENST00000330188 DUSP21Q9H596 190 aa13.96□□□□□ -0.18
TPM3-206ENST00000330188 ERVK-18Q9QC07 812 aa13.96□□□□□ -0.18
TPM3-206ENST00000330188 WARS2Q9UGM6 360 aaKnown RBP13.96□□□□□ -0.18
TPM3-206ENST00000330188 ACSL6Q9UKU0 697 aa13.96□□□□□ -0.18
TPM3-206ENST00000330188 TSC22D4Q9Y3Q8 395 aa13.96□□□□□ -0.18
TPM3-206ENST00000330188 ANTXRLA6NF34 631 aa13.95□□□□□ -0.18
TPM3-206ENST00000330188 ZNF99A8MXY4 864 aaPredicted RBP13.95□□□□□ -0.18
TPM3-206ENST00000330188 OPN1SWP03999 348 aa13.95□□□□□ -0.18
TPM3-206ENST00000330188 MYOGP15173 224 aa13.95□□□□□ -0.18
TPM3-206ENST00000330188 CD6P30203 668 aa13.95□□□□□ -0.18
TPM3-206ENST00000330188 RRM2P31350 389 aa13.95□□□□□ -0.18
TPM3-206ENST00000330188 PHEXP78562 749 aa13.95□□□□□ -0.18
TPM3-206ENST00000330188 MAD2L1BPQ15013 274 aaPredicted RBP13.95□□□□□ -0.18
TPM3-206ENST00000330188 GCNT6Q5T4J0 391 aa13.95□□□□□ -0.18
TPM3-206ENST00000330188 KLHL35Q6PF15 583 aa13.95□□□□□ -0.18
TPM3-206ENST00000330188 FAM124AQ86V42 546 aa13.95□□□□□ -0.18
TPM3-206ENST00000330188 TSPYL5Q86VY4 417 aaPredicted RBP13.95□□□□□ -0.18
TPM3-206ENST00000330188 FAM129CQ86XR2 697 aa13.95□□□□□ -0.18
TPM3-206ENST00000330188 CCDC71Q8IV32 467 aaPredicted RBP13.95□□□□□ -0.18
TPM3-206ENST00000330188 C2orf73Q8N5S3 287 aaPredicted RBP13.95□□□□□ -0.18
TPM3-206ENST00000330188 UBE2E3Q969T4 207 aa13.95□□□□□ -0.18
TPM3-206ENST00000330188 ZDHHC4Q9NPG8 344 aa13.95□□□□□ -0.18
TPM3-206ENST00000330188 NDUFAF4Q9P032 175 aa13.95□□□□□ -0.18
TPM3-206ENST00000330188 SPASTQ9UBP0 616 aa13.95□□□□□ -0.18
TPM3-206ENST00000330188 ENPP5Q9UJA9 477 aa13.95□□□□□ -0.18
TPM3-206ENST00000330188 TPRKBQ9Y3C4 175 aa13.95□□□□□ -0.18
TPM3-206ENST00000330188 PCDHGB3Q9Y5G1 929 aa13.95□□□□□ -0.18
TPM3-206ENST00000330188 PLXND1Q9Y4D7 1925 aa13.94□□□□□ -0.18
TPM3-206ENST00000330188 NDUFS2O75306 463 aa13.94□□□□□ -0.18
TPM3-206ENST00000330188 BCL10O95999 233 aa13.94□□□□□ -0.18
TPM3-206ENST00000330188 RB1P06400 928 aa13.94□□□□□ -0.18
TPM3-206ENST00000330188 IL3P08700 152 aa13.94□□□□□ -0.18
TPM3-206ENST00000330188 KELP23276 732 aa13.94□□□□□ -0.18
TPM3-206ENST00000330188 FSHRP23945 695 aa13.94□□□□□ -0.18
TPM3-206ENST00000330188 IL12RB1P42701 662 aa13.94□□□□□ -0.18
TPM3-206ENST00000330188 RBBP4Q09028 425 aa13.94□□□□□ -0.18
TPM3-206ENST00000330188 NPRL3Q12980 569 aa13.94□□□□□ -0.18
TPM3-206ENST00000330188 AQP6Q13520 282 aa13.94□□□□□ -0.18
TPM3-206ENST00000330188 CAMK2GQ13555 558 aaPredicted RBP13.94□□□□□ -0.18
TPM3-206ENST00000330188 SCARB2Q14108 478 aa13.94□□□□□ -0.18
TPM3-206ENST00000330188 NPTX1Q15818 432 aa13.94□□□□□ -0.18
TPM3-206ENST00000330188 TMIGD1Q6UXZ0 262 aa13.94□□□□□ -0.18
TPM3-206ENST00000330188 ADAMTSL4Q6UY14 1074 aa13.94□□□□□ -0.18
TPM3-206ENST00000330188 ANKRD13BQ86YJ7 626 aa13.94□□□□□ -0.18
TPM3-206ENST00000330188 SPPL2AQ8TCT8 520 aa13.94□□□□□ -0.18
TPM3-206ENST00000330188 SMARCD2Q92925 531 aa13.94□□□□□ -0.18
TPM3-206ENST00000330188 RAD51AP1Q96B01 352 aa13.94□□□□□ -0.18
TPM3-206ENST00000330188 MTERF3Q96E29 417 aa13.94□□□□□ -0.18
TPM3-206ENST00000330188 HSPBAP1Q96EW2 488 aa13.94□□□□□ -0.18
TPM3-206ENST00000330188 SORBS1Q9BX66 1292 aaKnown RBP13.94□□□□□ -0.18
TPM3-206ENST00000330188 TMEM38AQ9H6F2 299 aa13.94□□□□□ -0.18
TPM3-206ENST00000330188 RUBCNLQ9H714 662 aa13.94□□□□□ -0.18
TPM3-206ENST00000330188 PREBQ9HCU5 417 aa13.94□□□□□ -0.18
TPM3-206ENST00000330188 C1GALT1Q9NS00 363 aa13.94□□□□□ -0.18
TPM3-206ENST00000330188 SLC23A2Q9UGH3 650 aa13.94□□□□□ -0.18
TPM3-206ENST00000330188 PRKAG2Q9UGJ0 569 aa13.94□□□□□ -0.18
TPM3-206ENST00000330188 PCDHGA10Q9Y5H3 936 aa13.94□□□□□ -0.18
TPM3-206ENST00000330188 LYVE1Q9Y5Y7 322 aa13.94□□□□□ -0.18
TPM3-206ENST00000330188 ALPK3Q96L96 1907 aa13.94□□□□□ -0.18
TPM3-206ENST00000330188 C1QTNF3-AMACRE9PGA6 284 aa13.94□□□□□ -0.18
TPM3-206ENST00000330188 AXIN1O15169 862 aa13.94□□□□□ -0.18
TPM3-206ENST00000330188 ERGP11308 486 aa13.94□□□□□ -0.18
TPM3-206ENST00000330188 TNFRSF1BP20333 461 aa13.94□□□□□ -0.18
TPM3-206ENST00000330188 PTX3P26022 381 aaPredicted RBP13.94□□□□□ -0.18
TPM3-206ENST00000330188 RXRGP48443 463 aa13.94□□□□□ -0.18
TPM3-206ENST00000330188 EEF1A2Q05639 463 aaKnown RBP13.94□□□□□ -0.18
TPM3-206ENST00000330188 CNTN1Q12860 1018 aa13.94□□□□□ -0.18
TPM3-206ENST00000330188 RPA4Q13156 261 aa13.94□□□□□ -0.18
TPM3-206ENST00000330188 FADDQ13158 208 aa13.94□□□□□ -0.18
TPM3-206ENST00000330188 SPCS2Q15005 226 aa13.94□□□□□ -0.18
TPM3-206ENST00000330188 CCDC80Q76M96 950 aa13.94□□□□□ -0.18
TPM3-206ENST00000330188 DCUN1D3Q8IWE4 304 aa13.94□□□□□ -0.18
TPM3-206ENST00000330188 MMP21Q8N119 569 aa13.94□□□□□ -0.18
TPM3-206ENST00000330188 OXR1Q8N573 874 aa13.94□□□□□ -0.18
TPM3-206ENST00000330188 OR5AK3PQ8NH89 298 aa13.94□□□□□ -0.18
TPM3-206ENST00000330188 NFKBIDQ8NI38 313 aa13.94□□□□□ -0.18
TPM3-206ENST00000330188 TAMM41Q96BW9 452 aa13.94□□□□□ -0.18
TPM3-206ENST00000330188 NRTNQ99748 197 aa13.94□□□□□ -0.18
TPM3-206ENST00000330188 TMEM121BQ9BXQ6 578 aaPredicted RBP13.94□□□□□ -0.18
TPM3-206ENST00000330188 HDAC8Q9BY41 377 aa13.94□□□□□ -0.18
TPM3-206ENST00000330188 GABARAPL3Q9BY60 117 aa13.94□□□□□ -0.18
TPM3-206ENST00000330188 TMEM184CQ9NVA4 438 aa13.94□□□□□ -0.18
TPM3-206ENST00000330188 TAS2R9Q9NYW1 312 aa13.94□□□□□ -0.18
TPM3-206ENST00000330188 TDRKHQ9Y2W6 561 aaKnown RBP13.94□□□□□ -0.18
TPM3-206ENST00000330188 TESMINQ9Y4I5 508 aa13.94□□□□□ -0.18
TPM3-206ENST00000330188 hCG_2014768A0A024R1R8 64 aa13.93□□□□□ -0.18
TPM3-206ENST00000330188 A0A1W2PRB8 838 aa13.93□□□□□ -0.18
TPM3-206ENST00000330188 TBX6O95947 436 aaPredicted RBP13.93□□□□□ -0.18
TPM3-206ENST00000330188 ACVR2AP27037 513 aa13.93□□□□□ -0.18
TPM3-206ENST00000330188 RPP38P78345 283 aaKnown RBP13.93□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms