RNA–Protein interactions for RNA: ENST00000329970.7

GTF3C6-201, Transcript of general transcription factor IIIC subunit 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GTF3C6, Length 952 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C6-201ENST00000329970 EGFL8Q99944 293 aa12.75□□□□□ -0.37
GTF3C6-201ENST00000329970 NPLQ9BXD5 320 aaPredicted RBP12.75□□□□□ -0.37
GTF3C6-201ENST00000329970 TRIM45Q9H8W5 580 aaPredicted RBP12.75□□□□□ -0.37
GTF3C6-201ENST00000329970 PYCARDQ9ULZ3 195 aa12.75□□□□□ -0.37
GTF3C6-201ENST00000329970 MMACHCQ9Y4U1 282 aa12.75□□□□□ -0.37
GTF3C6-201ENST00000329970 CTAGE15A4D2H0 777 aa12.74□□□□□ -0.37
GTF3C6-201ENST00000329970 ASPDHA6ND91 283 aa12.74□□□□□ -0.37
GTF3C6-201ENST00000329970 SAGE2PA6NJ88 616 aa12.74□□□□□ -0.37
GTF3C6-201ENST00000329970 FAM159BA6NKW6 160 aa12.74□□□□□ -0.37
GTF3C6-201ENST00000329970 A8MUI8 341 aa12.74□□□□□ -0.37
GTF3C6-201ENST00000329970 CDC123O75794 336 aaPredicted RBP12.74□□□□□ -0.37
GTF3C6-201ENST00000329970 F10P00742 488 aa12.74□□□□□ -0.37
GTF3C6-201ENST00000329970 C1QAP02745 245 aa12.74□□□□□ -0.37
GTF3C6-201ENST00000329970 SERPIND1P05546 499 aa12.74□□□□□ -0.37
GTF3C6-201ENST00000329970 C1GALT1C1LP0DN25 315 aa12.74□□□□□ -0.37
GTF3C6-201ENST00000329970 SAT1P21673 171 aa12.74□□□□□ -0.37
GTF3C6-201ENST00000329970 HPDP32754 393 aaPredicted RBP12.74□□□□□ -0.37
GTF3C6-201ENST00000329970 DCTP40126 519 aa12.74□□□□□ -0.37
GTF3C6-201ENST00000329970 SLC12A2P55011 1212 aa12.74□□□□□ -0.37
GTF3C6-201ENST00000329970 ATP6V0D1P61421 351 aa12.74□□□□□ -0.37
GTF3C6-201ENST00000329970 STXBP1P61764 594 aaKnown RBP12.74□□□□□ -0.37
GTF3C6-201ENST00000329970 TERF2Q15554 542 aa12.74□□□□□ -0.37
GTF3C6-201ENST00000329970 ZKSCAN8Q15776 578 aaPredicted RBP12.74□□□□□ -0.37
GTF3C6-201ENST00000329970 ADPRMQ3LIE5 342 aa12.74□□□□□ -0.37
GTF3C6-201ENST00000329970 CTAGE6Q86UF2 777 aa12.74□□□□□ -0.37
GTF3C6-201ENST00000329970 HORMAD2Q8N7B1 307 aa12.74□□□□□ -0.37
GTF3C6-201ENST00000329970 AMER2Q8N7J2 671 aa12.74□□□□□ -0.37
GTF3C6-201ENST00000329970 SPATA4Q8NEY3 305 aa12.74□□□□□ -0.37
GTF3C6-201ENST00000329970 ADAMTS18Q8TE60 1221 aa12.74□□□□□ -0.37
GTF3C6-201ENST00000329970 GAL3ST3Q96A11 431 aa12.74□□□□□ -0.37
GTF3C6-201ENST00000329970 RBBP8Q99708 897 aa12.74□□□□□ -0.37
GTF3C6-201ENST00000329970 UTP23Q9BRU9 249 aaKnown RBP12.74□□□□□ -0.37
GTF3C6-201ENST00000329970 RBCK1Q9BYM8 510 aa12.74□□□□□ -0.37
GTF3C6-201ENST00000329970 AICDAQ9GZX7 198 aa12.74□□□□□ -0.37
GTF3C6-201ENST00000329970 CNOT10Q9H9A5 744 aaKnown RBP12.74□□□□□ -0.37
GTF3C6-201ENST00000329970 PRDM9Q9NQV7 894 aa12.74□□□□□ -0.37
GTF3C6-201ENST00000329970 TCRBV9S1A1TA0A576 114 aa12.73□□□□□ -0.37
GTF3C6-201ENST00000329970 GABRR3A8MPY1 467 aa12.73□□□□□ -0.37
GTF3C6-201ENST00000329970 C4orf51C9J302 202 aa12.73□□□□□ -0.37
GTF3C6-201ENST00000329970 PRMT3O60678 531 aa12.73□□□□□ -0.37
GTF3C6-201ENST00000329970 DNAJB6O75190 326 aa12.73□□□□□ -0.37
GTF3C6-201ENST00000329970 H2AFYO75367 372 aaKnown RBP12.73□□□□□ -0.37
GTF3C6-201ENST00000329970 WDR47O94967 919 aa12.73□□□□□ -0.37
GTF3C6-201ENST00000329970 MLYCDO95822 493 aa12.73□□□□□ -0.37
GTF3C6-201ENST00000329970 CD1DP15813 335 aa12.73□□□□□ -0.37
GTF3C6-201ENST00000329970 MST1P26927 711 aa12.73□□□□□ -0.37
GTF3C6-201ENST00000329970 SSTR1P30872 391 aa12.73□□□□□ -0.37
GTF3C6-201ENST00000329970 GP5P40197 560 aa12.73□□□□□ -0.37
GTF3C6-201ENST00000329970 CD96P40200 585 aa12.73□□□□□ -0.37
GTF3C6-201ENST00000329970 OLR1P78380 273 aa12.73□□□□□ -0.37
GTF3C6-201ENST00000329970 E2F2Q14209 437 aa12.73□□□□□ -0.37
GTF3C6-201ENST00000329970 RBBP5Q15291 538 aaKnown RBP12.73□□□□□ -0.37
GTF3C6-201ENST00000329970 SULT1C3Q6IMI6 304 aa12.73□□□□□ -0.37
GTF3C6-201ENST00000329970 MTFR2Q6P444 385 aa12.73□□□□□ -0.37
GTF3C6-201ENST00000329970 GFRALQ6UXV0 394 aa12.73□□□□□ -0.37
GTF3C6-201ENST00000329970 TMIGD1Q6UXZ0 262 aa12.73□□□□□ -0.37
GTF3C6-201ENST00000329970 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP12.73□□□□□ -0.37
GTF3C6-201ENST00000329970 KRT78Q8N1N4 520 aa12.73□□□□□ -0.37
GTF3C6-201ENST00000329970 CA13Q8N1Q1 262 aa12.73□□□□□ -0.37
GTF3C6-201ENST00000329970 TMEM178AQ8NBL3 297 aa12.73□□□□□ -0.37
GTF3C6-201ENST00000329970 PDPRQ8NCN5 879 aa12.73□□□□□ -0.37
GTF3C6-201ENST00000329970 ARMC2Q8NEN0 867 aa12.73□□□□□ -0.37
GTF3C6-201ENST00000329970 THAP3Q8WTV1 239 aaPredicted RBP12.73□□□□□ -0.37
GTF3C6-201ENST00000329970 WDR34Q96EX3 536 aa12.73□□□□□ -0.37
GTF3C6-201ENST00000329970 UBXN10Q96LJ8 280 aa12.73□□□□□ -0.37
GTF3C6-201ENST00000329970 PTCHD1Q96NR3 888 aa12.73□□□□□ -0.37
GTF3C6-201ENST00000329970 SIGLEC12Q96PQ1 595 aa12.73□□□□□ -0.37
GTF3C6-201ENST00000329970 TMEM79Q9BSE2 394 aa12.73□□□□□ -0.37
GTF3C6-201ENST00000329970 KLHL31Q9H511 634 aa12.73□□□□□ -0.37
GTF3C6-201ENST00000329970 GRHL1Q9NZI5 618 aa12.73□□□□□ -0.37
GTF3C6-201ENST00000329970 SEC14L3Q9UDX4 400 aa12.73□□□□□ -0.37
GTF3C6-201ENST00000329970 PPIEQ9UNP9 301 aaKnown RBP12.73□□□□□ -0.37
GTF3C6-201ENST00000329970 MTO1Q9Y2Z2 717 aaKnown RBP12.73□□□□□ -0.37
GTF3C6-201ENST00000329970 CACNA1CQ13936 2221 aa12.73□□□□□ -0.37
GTF3C6-201ENST00000329970 CREBBPQ92793 2442 aa12.72□□□□□ -0.37
GTF3C6-201ENST00000329970 A0A088AWK7 358 aa12.72□□□□□ -0.37
GTF3C6-201ENST00000329970 CXorf49A8MYA2 514 aaPredicted RBP12.72□□□□□ -0.37
GTF3C6-201ENST00000329970 PSMD12O00232 456 aaPredicted RBP12.72□□□□□ -0.37
GTF3C6-201ENST00000329970 RAD51CO43502 376 aa12.72□□□□□ -0.37
GTF3C6-201ENST00000329970 B4GALT2O60909 372 aa12.72□□□□□ -0.37
GTF3C6-201ENST00000329970 CLEC3AO75596 197 aa12.72□□□□□ -0.37
GTF3C6-201ENST00000329970 NEURL1O76050 574 aa12.72□□□□□ -0.37
GTF3C6-201ENST00000329970 B3GALT4O96024 378 aa12.72□□□□□ -0.37
GTF3C6-201ENST00000329970 CD46P15529 392 aa12.72□□□□□ -0.37
GTF3C6-201ENST00000329970 STMN1P16949 149 aa12.72□□□□□ -0.37
GTF3C6-201ENST00000329970 ZNF10P21506 573 aaPredicted RBP12.72□□□□□ -0.37
GTF3C6-201ENST00000329970 TRHRP34981 398 aaPredicted RBP12.72□□□□□ -0.37
GTF3C6-201ENST00000329970 CA7P43166 264 aa12.72□□□□□ -0.37
GTF3C6-201ENST00000329970 KCNK10P57789 538 aa12.72□□□□□ -0.37
GTF3C6-201ENST00000329970 RAB8AP61006 207 aa12.72□□□□□ -0.37
GTF3C6-201ENST00000329970 BTG2P78543 158 aa12.72□□□□□ -0.37
GTF3C6-201ENST00000329970 CAV1Q03135 178 aa12.72□□□□□ -0.37
GTF3C6-201ENST00000329970 RBPJQ06330 500 aa12.72□□□□□ -0.37
GTF3C6-201ENST00000329970 OR1C1Q15619 314 aa12.72□□□□□ -0.37
GTF3C6-201ENST00000329970 KRTCAP3Q53RY4 240 aa12.72□□□□□ -0.37
GTF3C6-201ENST00000329970 TOR1AIP1Q5JTV8 583 aa12.72□□□□□ -0.37
GTF3C6-201ENST00000329970 FCRLBQ6BAA4 426 aa12.72□□□□□ -0.37
GTF3C6-201ENST00000329970 FJX1Q86VR8 437 aa12.72□□□□□ -0.37
GTF3C6-201ENST00000329970 RPS19BP1Q86WX3 136 aaKnown RBP12.72□□□□□ -0.37
GTF3C6-201ENST00000329970 SCUBE1Q8IWY4 988 aa12.72□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 107.1 ms