RNA–Protein interactions for RNA: ENST00000321728.11

PRKCB-202, Transcript of protein kinase C beta, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PRKCB, Length 2,689 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCB-202ENST00000321728 ZXDCQ2QGD7 858 aaPredicted RBP17.19■□□□□ 0.34
PRKCB-202ENST00000321728 PTCHD3Q3KNS1 767 aa17.19■□□□□ 0.34
PRKCB-202ENST00000321728 UBE2R2Q712K3 238 aaPredicted RBP17.19■□□□□ 0.34
PRKCB-202ENST00000321728 NLRP8Q86W28 1048 aa17.19■□□□□ 0.34
PRKCB-202ENST00000321728 YIPF7Q8N8F6 280 aa17.19■□□□□ 0.34
PRKCB-202ENST00000321728 OR6K2Q8NGY2 324 aa17.19■□□□□ 0.34
PRKCB-202ENST00000321728 TRMT61AQ96FX7 289 aaKnown RBP17.19■□□□□ 0.34
PRKCB-202ENST00000321728 IL26Q9NPH9 171 aa17.19■□□□□ 0.34
PRKCB-202ENST00000321728 SLC22A14Q9Y267 594 aa17.19■□□□□ 0.34
PRKCB-202ENST00000321728 CLDN11O75508 207 aa17.18■□□□□ 0.34
PRKCB-202ENST00000321728 OAZ2O95190 189 aa17.18■□□□□ 0.34
PRKCB-202ENST00000321728 CSF3P09919 207 aa17.18■□□□□ 0.34
PRKCB-202ENST00000321728 ERP29P30040 261 aaKnown RBP17.18■□□□□ 0.34
PRKCB-202ENST00000321728 HOXC8P31273 242 aa17.18■□□□□ 0.34
PRKCB-202ENST00000321728 OR3A3P47888 321 aa17.18■□□□□ 0.34
PRKCB-202ENST00000321728 SLC11A2P49281 568 aa17.18■□□□□ 0.34
PRKCB-202ENST00000321728 GAB1Q13480 694 aa17.18■□□□□ 0.34
PRKCB-202ENST00000321728 GANABQ14697 944 aaKnown RBP17.18■□□□□ 0.34
PRKCB-202ENST00000321728 LARS2Q15031 903 aaKnown RBP17.18■□□□□ 0.34
PRKCB-202ENST00000321728 TEAD4Q15561 434 aa17.18■□□□□ 0.34
PRKCB-202ENST00000321728 PYDC2Q56P42 97 aa17.18■□□□□ 0.34
PRKCB-202ENST00000321728 DGKKQ5KSL6 1271 aa17.18■□□□□ 0.34
PRKCB-202ENST00000321728 LRRC70Q7Z2Q7 622 aa17.18■□□□□ 0.34
PRKCB-202ENST00000321728 TRIM69Q86WT6 500 aa17.18■□□□□ 0.34
PRKCB-202ENST00000321728 ZFAND1Q8TCF1 268 aa17.18■□□□□ 0.34
PRKCB-202ENST00000321728 WDFY2Q96P53 400 aa17.18■□□□□ 0.34
PRKCB-202ENST00000321728 CHST8Q9H2A9 424 aa17.18■□□□□ 0.34
PRKCB-202ENST00000321728 ZFYVE1Q9HBF4 777 aa17.18■□□□□ 0.34
PRKCB-202ENST00000321728 CDRT1O95170 752 aa17.18■□□□□ 0.34
PRKCB-202ENST00000321728 ALPPP05187 535 aa17.18■□□□□ 0.34
PRKCB-202ENST00000321728 TSPAN19P0C672 248 aa17.18■□□□□ 0.34
PRKCB-202ENST00000321728 ENDOUP21128 410 aaKnown RBP17.18■□□□□ 0.34
PRKCB-202ENST00000321728 OR1G1P47890 313 aa17.18■□□□□ 0.34
PRKCB-202ENST00000321728 ARF5P84085 180 aa17.18■□□□□ 0.34
PRKCB-202ENST00000321728 GGTA1PQ4G0N0 100 aa17.18■□□□□ 0.34
PRKCB-202ENST00000321728 SLC35F1Q5T1Q4 408 aa17.18■□□□□ 0.34
PRKCB-202ENST00000321728 PARK7Q99497 189 aaKnown RBP17.18■□□□□ 0.34
PRKCB-202ENST00000321728 MTERF1Q99551 399 aaKnown RBP17.18■□□□□ 0.34
PRKCB-202ENST00000321728 SPATA9Q9BWV2 254 aa17.18■□□□□ 0.34
PRKCB-202ENST00000321728 SEC14L4Q9UDX3 406 aa17.18■□□□□ 0.34
PRKCB-202ENST00000321728 DNMT3LQ9UJW3 386 aa17.18■□□□□ 0.34
PRKCB-202ENST00000321728 SATB2Q9UPW6 733 aa17.18■□□□□ 0.34
PRKCB-202ENST00000321728 ZNF670-ZNF695F2Z2N8 137 aa17.17■□□□□ 0.34
PRKCB-202ENST00000321728 ENTPD6O75354 484 aa17.17■□□□□ 0.34
PRKCB-202ENST00000321728 HIST1H2AGP0C0S8 130 aaPredicted RBP17.17■□□□□ 0.34
PRKCB-202ENST00000321728 HIST1H2ADP20671 130 aa17.17■□□□□ 0.34
PRKCB-202ENST00000321728 SSTR4P31391 388 aa17.17■□□□□ 0.34
PRKCB-202ENST00000321728 CRYBB2P43320 205 aa17.17■□□□□ 0.34
PRKCB-202ENST00000321728 KIR2DL3P43628 341 aa17.17■□□□□ 0.34
PRKCB-202ENST00000321728 RHOAP61586 193 aa17.17■□□□□ 0.34
PRKCB-202ENST00000321728 SNRPD2P62316 118 aaKnown RBP17.17■□□□□ 0.34
PRKCB-202ENST00000321728 BNC1Q01954 994 aa17.17■□□□□ 0.34
PRKCB-202ENST00000321728 SPHARQ15513 63 aa17.17■□□□□ 0.34
PRKCB-202ENST00000321728 CPTPQ5TA50 214 aa17.17■□□□□ 0.34
PRKCB-202ENST00000321728 CCDC28AQ8IWP9 274 aa17.17■□□□□ 0.34
PRKCB-202ENST00000321728 AQP11Q8NBQ7 271 aa17.17■□□□□ 0.34
PRKCB-202ENST00000321728 VPS37AQ8NEZ2 397 aa17.17■□□□□ 0.34
PRKCB-202ENST00000321728 CHTF18Q8WVB6 975 aa17.17■□□□□ 0.34
PRKCB-202ENST00000321728 DEDD2Q8WXF8 326 aa17.17■□□□□ 0.34
PRKCB-202ENST00000321728 HIST1H2AHQ96KK5 128 aa17.17■□□□□ 0.34
PRKCB-202ENST00000321728 COQ7Q99807 217 aa17.17■□□□□ 0.34
PRKCB-202ENST00000321728 HIST1H2AJQ99878 128 aa17.17■□□□□ 0.34
PRKCB-202ENST00000321728 H2AFJQ9BTM1 129 aa17.17■□□□□ 0.34
PRKCB-202ENST00000321728 C11orf16Q9NQ32 467 aa17.17■□□□□ 0.34
PRKCB-202ENST00000321728 STUB1Q9UNE7 303 aa17.17■□□□□ 0.34
PRKCB-202ENST00000321728 SSR3Q9UNL2 185 aa17.17■□□□□ 0.34
PRKCB-202ENST00000321728 CORO2BQ9UQ03 480 aa17.17■□□□□ 0.34
PRKCB-202ENST00000321728 HCN4Q9Y3Q4 1203 aa17.17■□□□□ 0.34
PRKCB-202ENST00000321728 A0A1W2PQ72 361 aa17.17■□□□□ 0.34
PRKCB-202ENST00000321728 A0A1W2PQL4 384 aaPredicted RBP17.17■□□□□ 0.34
PRKCB-202ENST00000321728 MPZL2O60487 215 aa17.17■□□□□ 0.34
PRKCB-202ENST00000321728 PRMT3O60678 531 aa17.17■□□□□ 0.34
PRKCB-202ENST00000321728 IFI30P13284 250 aa17.17■□□□□ 0.34
PRKCB-202ENST00000321728 RHAGQ02094 409 aa17.17■□□□□ 0.34
PRKCB-202ENST00000321728 FCHO2Q0JRZ9 810 aa17.17■□□□□ 0.34
PRKCB-202ENST00000321728 CHIT1Q13231 466 aa17.17■□□□□ 0.34
PRKCB-202ENST00000321728 CHRNA6Q15825 494 aa17.17■□□□□ 0.34
PRKCB-202ENST00000321728 GLYR1Q49A26 553 aaPredicted RBP17.17■□□□□ 0.34
PRKCB-202ENST00000321728 CTXN3Q4LDR2 81 aa17.17■□□□□ 0.34
PRKCB-202ENST00000321728 EEF1AKMT2Q5JPI9 291 aaKnown RBP17.17■□□□□ 0.34
PRKCB-202ENST00000321728 ARMC12Q5T9G4 340 aa17.17■□□□□ 0.34
PRKCB-202ENST00000321728 XKRXQ6PP77 449 aa17.17■□□□□ 0.34
PRKCB-202ENST00000321728 SLC38A6Q8IZM9 456 aa17.17■□□□□ 0.34
PRKCB-202ENST00000321728 FAM109AQ8N4B1 249 aa17.17■□□□□ 0.34
PRKCB-202ENST00000321728 PIH1D2Q8WWB5 315 aa17.17■□□□□ 0.34
PRKCB-202ENST00000321728 ZNF717Q9BY31 904 aaPredicted RBP17.17■□□□□ 0.34
PRKCB-202ENST00000321728 NMRK2Q9NPI5 230 aa17.17■□□□□ 0.34
PRKCB-202ENST00000321728 HCSTQ9UBK5 93 aa17.17■□□□□ 0.34
PRKCB-202ENST00000321728 FCF1Q9Y324 198 aaKnown RBP17.17■□□□□ 0.34
PRKCB-202ENST00000321728 PCM1Q15154 2024 aa17.17■□□□□ 0.34
PRKCB-202ENST00000321728 PDE4DIPQ5VU43 2346 aa17.16■□□□□ 0.34
PRKCB-202ENST00000321728 GLYATL1P3A0A0U1RQE8 302 aa17.16■□□□□ 0.34
PRKCB-202ENST00000321728 SLC35F4A4IF30 521 aa17.16■□□□□ 0.34
PRKCB-202ENST00000321728 PRAMEF4O60810 478 aa17.16■□□□□ 0.34
PRKCB-202ENST00000321728 CSO75390 466 aaKnown RBP17.16■□□□□ 0.34
PRKCB-202ENST00000321728 AP2A2O94973 939 aa17.16■□□□□ 0.34
PRKCB-202ENST00000321728 ETFAP13804 333 aa17.16■□□□□ 0.34
PRKCB-202ENST00000321728 CHMP24386 653 aa17.16■□□□□ 0.34
PRKCB-202ENST00000321728 CSTF2P33240 577 aaKnown RBP eCLIP17.16■□□□□ 0.34
PRKCB-202ENST00000321728 ALDH9A1P49189 494 aa17.16■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 45.9 ms