RNA–Protein interactions for RNA: ENST00000320755.11

COL9A1-201, Transcript of collagen type IX alpha 1 chain, humanhuman

TSL 1 (best) BASIC

Gene COL9A1, Length 3,059 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A1-201ENST00000320755 HSMCR30P0CW71 290 aa16.71■□□□□ 0.26
COL9A1-201ENST00000320755 BMP4P12644 408 aa16.71■□□□□ 0.26
COL9A1-201ENST00000320755 LIPAP38571 399 aa16.71■□□□□ 0.26
COL9A1-201ENST00000320755 RPS26P62854 115 aaKnown RBP16.71■□□□□ 0.26
COL9A1-201ENST00000320755 IFITM3Q01628 133 aa16.71■□□□□ 0.26
COL9A1-201ENST00000320755 ARHGEF6Q15052 776 aa16.71■□□□□ 0.26
COL9A1-201ENST00000320755 PRSS48Q7RTY5 328 aa16.71■□□□□ 0.26
COL9A1-201ENST00000320755 LGI4Q8N135 537 aa16.71■□□□□ 0.26
COL9A1-201ENST00000320755 ZBTB20Q9HC78 741 aaPredicted RBP16.71■□□□□ 0.26
COL9A1-201ENST00000320755 GPR83Q9NYM4 423 aa16.71■□□□□ 0.26
COL9A1-201ENST00000320755 LOC100506127A0A0U1RQW1 187 aa16.7■□□□□ 0.26
COL9A1-201ENST00000320755 EFCAB9A8MZ26 197 aa16.7■□□□□ 0.26
COL9A1-201ENST00000320755 POU1F1P28069 291 aa16.7■□□□□ 0.26
COL9A1-201ENST00000320755 PCGF2P35227 344 aa16.7■□□□□ 0.26
COL9A1-201ENST00000320755 MMP12P39900 470 aa16.7■□□□□ 0.26
COL9A1-201ENST00000320755 TCEAL5Q5H9L2 206 aa16.7■□□□□ 0.26
COL9A1-201ENST00000320755 GCNT6Q5T4J0 391 aa16.7■□□□□ 0.26
COL9A1-201ENST00000320755 HRASLS5Q96KN8 279 aa16.7■□□□□ 0.26
COL9A1-201ENST00000320755 PALMDQ9NP74 551 aa16.7■□□□□ 0.26
COL9A1-201ENST00000320755 SLC6A14Q9UN76 642 aa16.7■□□□□ 0.26
COL9A1-201ENST00000320755 CFAP20Q9Y6A4 193 aaKnown RBP16.7■□□□□ 0.26
COL9A1-201ENST00000320755 PIPSLA2A3N6 862 aa16.7■□□□□ 0.26
COL9A1-201ENST00000320755 HSD3B1P14060 373 aa16.7■□□□□ 0.26
COL9A1-201ENST00000320755 PPIBP23284 216 aaKnown RBP16.7■□□□□ 0.26
COL9A1-201ENST00000320755 HSD3B2P26439 372 aa16.7■□□□□ 0.26
COL9A1-201ENST00000320755 SERPINB10P48595 397 aa16.7■□□□□ 0.26
COL9A1-201ENST00000320755 PRSS53Q2L4Q9 553 aa16.7■□□□□ 0.26
COL9A1-201ENST00000320755 SOWAHCQ53LP3 525 aaPredicted RBP16.7■□□□□ 0.26
COL9A1-201ENST00000320755 ARHGAP15Q53QZ3 475 aa16.7■□□□□ 0.26
COL9A1-201ENST00000320755 CACUL1Q86Y37 369 aa16.7■□□□□ 0.26
COL9A1-201ENST00000320755 RASGRP3Q8IV61 690 aa16.7■□□□□ 0.26
COL9A1-201ENST00000320755 CCDC103Q8IW40 242 aa16.7■□□□□ 0.26
COL9A1-201ENST00000320755 PPP1R14BQ96C90 147 aa16.7■□□□□ 0.26
COL9A1-201ENST00000320755 ALPK1Q96QP1 1244 aa16.7■□□□□ 0.26
COL9A1-201ENST00000320755 EPYCQ99645 322 aa16.7■□□□□ 0.26
COL9A1-201ENST00000320755 CCNB1IP1Q9NPC3 277 aa16.7■□□□□ 0.26
COL9A1-201ENST00000320755 NECTIN3Q9NQS3 549 aa16.7■□□□□ 0.26
COL9A1-201ENST00000320755 CORO2BQ9UQ03 480 aa16.7■□□□□ 0.26
COL9A1-201ENST00000320755 PRAMEF25A6NGN4 478 aa16.69■□□□□ 0.26
COL9A1-201ENST00000320755 QSOX1O00391 747 aa16.69■□□□□ 0.26
COL9A1-201ENST00000320755 MMP20O60882 483 aa16.69■□□□□ 0.26
COL9A1-201ENST00000320755 ACVR2AP27037 513 aa16.69■□□□□ 0.26
COL9A1-201ENST00000320755 SLC19A1P41440 591 aa16.69■□□□□ 0.26
COL9A1-201ENST00000320755 GPR1P46091 355 aa16.69■□□□□ 0.26
COL9A1-201ENST00000320755 MVDP53602 400 aa16.69■□□□□ 0.26
COL9A1-201ENST00000320755 LRRC74AQ0VAA2 488 aa16.69■□□□□ 0.26
COL9A1-201ENST00000320755 NFE2L1Q14494 772 aa16.69■□□□□ 0.26
COL9A1-201ENST00000320755 TEAD4Q15561 434 aa16.69■□□□□ 0.26
COL9A1-201ENST00000320755 MPEG1Q2M385 716 aa16.69■□□□□ 0.26
COL9A1-201ENST00000320755 IFI44LQ53G44 452 aa16.69■□□□□ 0.26
COL9A1-201ENST00000320755 DPPA4Q7L190 304 aa16.69■□□□□ 0.26
COL9A1-201ENST00000320755 C16orf78Q8WTQ4 265 aa16.69■□□□□ 0.26
COL9A1-201ENST00000320755 AKIP1Q9NQ31 210 aa16.69■□□□□ 0.26
COL9A1-201ENST00000320755 MAFFQ9ULX9 164 aa16.69■□□□□ 0.26
COL9A1-201ENST00000320755 RTCAO00442 366 aaKnown RBP16.69■□□□□ 0.26
COL9A1-201ENST00000320755 RNASET2O00584 256 aaKnown RBP16.69■□□□□ 0.26
COL9A1-201ENST00000320755 KPNA4O00629 521 aaPredicted RBP16.69■□□□□ 0.26
COL9A1-201ENST00000320755 PCDH17O14917 1159 aa16.69■□□□□ 0.26
COL9A1-201ENST00000320755 SH3BP5O60239 455 aa16.69■□□□□ 0.26
COL9A1-201ENST00000320755 STSP08842 583 aa16.69■□□□□ 0.26
COL9A1-201ENST00000320755 C1GALT1C1LP0DN25 315 aa16.69■□□□□ 0.26
COL9A1-201ENST00000320755 PTPN2P17706 415 aa16.69■□□□□ 0.26
COL9A1-201ENST00000320755 GRASPQ7Z6J2 395 aaPredicted RBP16.69■□□□□ 0.26
COL9A1-201ENST00000320755 DYNC2LI1Q8TCX1 351 aa16.69■□□□□ 0.26
COL9A1-201ENST00000320755 TMEM98Q9Y2Y6 226 aa16.69■□□□□ 0.26
COL9A1-201ENST00000320755 NUMA1Q14980 2115 aa16.69■□□□□ 0.26
COL9A1-201ENST00000320755 OR2A25A4D2G3 310 aa16.68■□□□□ 0.26
COL9A1-201ENST00000320755 ADAMDEC1O15204 470 aa16.68■□□□□ 0.26
COL9A1-201ENST00000320755 CLTBP09497 229 aa16.68■□□□□ 0.26
COL9A1-201ENST00000320755 DBTP11182 482 aaKnown RBP16.68■□□□□ 0.26
COL9A1-201ENST00000320755 ALDH9A1P49189 494 aa16.68■□□□□ 0.26
COL9A1-201ENST00000320755 ST8SIA6P61647 398 aa16.68■□□□□ 0.26
COL9A1-201ENST00000320755 CDK6Q00534 326 aa16.68■□□□□ 0.26
COL9A1-201ENST00000320755 HIST2H2ACQ16777 129 aaPredicted RBP16.68■□□□□ 0.26
COL9A1-201ENST00000320755 HIST2H2AA3Q6FI13 130 aa16.68■□□□□ 0.26
COL9A1-201ENST00000320755 PSMA8Q8TAA3 256 aa16.68■□□□□ 0.26
COL9A1-201ENST00000320755 ZFYVE19Q96K21 471 aa16.68■□□□□ 0.26
COL9A1-201ENST00000320755 TOX2Q96NM4 488 aa16.68■□□□□ 0.26
COL9A1-201ENST00000320755 WDR12Q9GZL7 423 aaKnown RBP16.68■□□□□ 0.26
COL9A1-201ENST00000320755 RNF167Q9H6Y7 350 aa16.68■□□□□ 0.26
COL9A1-201ENST00000320755 DMRT3Q9NQL9 472 aa16.68■□□□□ 0.26
COL9A1-201ENST00000320755 IMPAD1Q9NX62 359 aa16.68■□□□□ 0.26
COL9A1-201ENST00000320755 PADI2Q9Y2J8 665 aa16.68■□□□□ 0.26
COL9A1-201ENST00000320755 NOTCH4Q99466 2003 aa16.68■□□□□ 0.26
COL9A1-201ENST00000320755 FAM227AF5H4B4 570 aa16.68■□□□□ 0.26
COL9A1-201ENST00000320755 LZTS3O60299 673 aaPredicted RBP16.68■□□□□ 0.26
COL9A1-201ENST00000320755 IL3P08700 152 aa16.68■□□□□ 0.26
COL9A1-201ENST00000320755 DGKGP49619 791 aa16.68■□□□□ 0.26
COL9A1-201ENST00000320755 TAP2Q03519 686 aa16.68■□□□□ 0.26
COL9A1-201ENST00000320755 ZNF33BQ06732 778 aa16.68■□□□□ 0.26
COL9A1-201ENST00000320755 C12orf40Q86WS4 652 aa16.68■□□□□ 0.26
COL9A1-201ENST00000320755 C6orf62Q9GZU0 229 aaPredicted RBP16.68■□□□□ 0.26
COL9A1-201ENST00000320755 DCSTAMPQ9H295 470 aa16.68■□□□□ 0.26
COL9A1-201ENST00000320755 MIEF1Q9NQG6 463 aa16.68■□□□□ 0.26
COL9A1-201ENST00000320755 ATAD3AQ9NVI7 634 aa16.68■□□□□ 0.26
COL9A1-201ENST00000320755 TAS2R16Q9NYV7 291 aa16.68■□□□□ 0.26
COL9A1-201ENST00000320755 C5AR2Q9P296 337 aa16.68■□□□□ 0.26
COL9A1-201ENST00000320755 ASF1AQ9Y294 204 aa16.68■□□□□ 0.26
COL9A1-201ENST00000320755 PRAMEF33A0A0G2JMD5 474 aa16.68■□□□□ 0.26
COL9A1-201ENST00000320755 AIREO43918 545 aa16.68■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 50.6 ms