RNA–Protein interactions for RNA: ENST00000318607.9

PABPC1-201, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PABPC1, Length 3,485 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-201ENST00000318607 CCDC177Q9NQR7 707 aaPredicted RBP13.67□□□□□ -0.22
PABPC1-201ENST00000318607 ATP6V1HQ9UI12 483 aa13.67□□□□□ -0.22
PABPC1-201ENST00000318607 VPS9D1Q9Y2B5 631 aa13.67□□□□□ -0.22
PABPC1-201ENST00000318607 PCDHGB3Q9Y5G1 929 aa13.67□□□□□ -0.22
PABPC1-201ENST00000318607 C6orf47O95873 294 aa13.67□□□□□ -0.22
PABPC1-201ENST00000318607 IGLV3-25P01717 112 aa13.67□□□□□ -0.22
PABPC1-201ENST00000318607 CDK1P06493 297 aa13.67□□□□□ -0.22
PABPC1-201ENST00000318607 HOXB8P17481 243 aaPredicted RBP13.67□□□□□ -0.22
PABPC1-201ENST00000318607 GRIK2Q13002 908 aa13.67□□□□□ -0.22
PABPC1-201ENST00000318607 CBX2Q14781 532 aaPredicted RBP13.67□□□□□ -0.22
PABPC1-201ENST00000318607 ATG9BQ674R7 924 aa13.67□□□□□ -0.22
PABPC1-201ENST00000318607 UBE2Q1Q7Z7E8 422 aa13.67□□□□□ -0.22
PABPC1-201ENST00000318607 COL21A1Q96P44 957 aa13.67□□□□□ -0.22
PABPC1-201ENST00000318607 TBX5Q99593 518 aa13.67□□□□□ -0.22
PABPC1-201ENST00000318607 HDHD5Q9BXW7 423 aa13.67□□□□□ -0.22
PABPC1-201ENST00000318607 GPR62Q9BZJ7 368 aa13.67□□□□□ -0.22
PABPC1-201ENST00000318607 PSORS1C1Q9UIG5 152 aa13.67□□□□□ -0.22
PABPC1-201ENST00000318607 TRPV2Q9Y5S1 764 aa13.67□□□□□ -0.22
PABPC1-201ENST00000318607 SSC5DA1L4H1 1573 aa13.67□□□□□ -0.22
PABPC1-201ENST00000318607 MYLKQ15746 1914 aa13.66□□□□□ -0.22
PABPC1-201ENST00000318607 GLYATL1P3A0A0U1RQE8 302 aa13.66□□□□□ -0.22
PABPC1-201ENST00000318607 ISPDA4D126 451 aa13.66□□□□□ -0.22
PABPC1-201ENST00000318607 FAM172BPA6NC97 362 aa13.66□□□□□ -0.22
PABPC1-201ENST00000318607 PDE9AO76083 593 aa13.66□□□□□ -0.22
PABPC1-201ENST00000318607 GADD45GO95257 159 aa13.66□□□□□ -0.22
PABPC1-201ENST00000318607 CELF2O95319 508 aaKnown RBP13.66□□□□□ -0.22
PABPC1-201ENST00000318607 SYPP08247 313 aa13.66□□□□□ -0.22
PABPC1-201ENST00000318607 ATF4P18848 351 aaPredicted RBP13.66□□□□□ -0.22
PABPC1-201ENST00000318607 SSTR2P30874 369 aa13.66□□□□□ -0.22
PABPC1-201ENST00000318607 SDC2P34741 201 aa13.66□□□□□ -0.22
PABPC1-201ENST00000318607 TUBA1BP68363 451 aa13.66□□□□□ -0.22
PABPC1-201ENST00000318607 LSM11P83369 360 aaKnown RBP eCLIP13.66□□□□□ -0.22
PABPC1-201ENST00000318607 KIAA0040Q15053 153 aa13.66□□□□□ -0.22
PABPC1-201ENST00000318607 CDK10Q15131 360 aa13.66□□□□□ -0.22
PABPC1-201ENST00000318607 SNAPC1Q16533 368 aa13.66□□□□□ -0.22
PABPC1-201ENST00000318607 CCSAPQ6IQ19 270 aaPredicted RBP13.66□□□□□ -0.22
PABPC1-201ENST00000318607 TUBA1AQ71U36 451 aa13.66□□□□□ -0.22
PABPC1-201ENST00000318607 LHFPL3Q86UP9 236 aa13.66□□□□□ -0.22
PABPC1-201ENST00000318607 RNF130Q86XS8 419 aa13.66□□□□□ -0.22
PABPC1-201ENST00000318607 ZZZ3Q8IYH5 903 aa13.66□□□□□ -0.22
PABPC1-201ENST00000318607 ZNF366Q8N895 744 aa13.66□□□□□ -0.22
PABPC1-201ENST00000318607 DEDD2Q8WXF8 326 aa13.66□□□□□ -0.22
PABPC1-201ENST00000318607 GATAD2BQ8WXI9 593 aa13.66□□□□□ -0.22
PABPC1-201ENST00000318607 ST6GAL2Q96JF0 529 aa13.66□□□□□ -0.22
PABPC1-201ENST00000318607 PSKH2Q96QS6 385 aa13.66□□□□□ -0.22
PABPC1-201ENST00000318607 TMED9Q9BVK6 235 aa13.66□□□□□ -0.22
PABPC1-201ENST00000318607 I3L521 148 aa13.66□□□□□ -0.22
PABPC1-201ENST00000318607 ERVH48-1M5A8F1 160 aa13.66□□□□□ -0.22
PABPC1-201ENST00000318607 BTN3A3O00478 584 aa13.66□□□□□ -0.22
PABPC1-201ENST00000318607 CASKO14936 926 aa13.66□□□□□ -0.22
PABPC1-201ENST00000318607 CCNB2O95067 398 aa13.66□□□□□ -0.22
PABPC1-201ENST00000318607 NPPAP01160 153 aa13.66□□□□□ -0.22
PABPC1-201ENST00000318607 ATP5C1P36542 298 aaKnown RBP13.66□□□□□ -0.22
PABPC1-201ENST00000318607 SCN1BQ07699 218 aa13.66□□□□□ -0.22
PABPC1-201ENST00000318607 GAB1Q13480 694 aa13.66□□□□□ -0.22
PABPC1-201ENST00000318607 SPEGQ15772 3267 aa13.66□□□□□ -0.22
PABPC1-201ENST00000318607 IQCCQ4KMZ1 466 aa13.66□□□□□ -0.22
PABPC1-201ENST00000318607 CAPN13Q6MZZ7 669 aaPredicted RBP13.66□□□□□ -0.22
PABPC1-201ENST00000318607 NOXA1Q86UR1 476 aa13.66□□□□□ -0.22
PABPC1-201ENST00000318607 NATD1Q8N6N6 113 aa13.66□□□□□ -0.22
PABPC1-201ENST00000318607 PIGKQ92643 395 aa13.66□□□□□ -0.22
PABPC1-201ENST00000318607 ARSGQ96EG1 525 aa13.66□□□□□ -0.22
PABPC1-201ENST00000318607 CLN6Q9NWW5 311 aa13.66□□□□□ -0.22
PABPC1-201ENST00000318607 SRCP12931 536 aa13.66□□□□□ -0.22
PABPC1-201ENST00000318607 STK19P49842 368 aaPredicted RBP13.66□□□□□ -0.22
PABPC1-201ENST00000318607 CPT1AP50416 773 aa13.66□□□□□ -0.22
PABPC1-201ENST00000318607 CACNG1Q06432 222 aa13.66□□□□□ -0.22
PABPC1-201ENST00000318607 DUOXA1Q1HG43 343 aa13.66□□□□□ -0.22
PABPC1-201ENST00000318607 CCSMST1Q4G0I0 132 aa13.66□□□□□ -0.22
PABPC1-201ENST00000318607 FRG2Q64ET8 278 aa13.66□□□□□ -0.22
PABPC1-201ENST00000318607 IL20RBQ6UXL0 311 aa13.66□□□□□ -0.22
PABPC1-201ENST00000318607 WDR53Q7Z5U6 358 aaPredicted RBP13.66□□□□□ -0.22
PABPC1-201ENST00000318607 TMPRSS11BQ86T26 416 aa13.66□□□□□ -0.22
PABPC1-201ENST00000318607 CDH24Q86UP0 819 aa13.66□□□□□ -0.22
PABPC1-201ENST00000318607 RBM45Q8IUH3 476 aaKnown RBP13.66□□□□□ -0.22
PABPC1-201ENST00000318607 RBFAQ8N0V3 343 aa13.66□□□□□ -0.22
PABPC1-201ENST00000318607 BEST4Q8NFU0 473 aa13.66□□□□□ -0.22
PABPC1-201ENST00000318607 BRI3BPQ8WY22 251 aa13.66□□□□□ -0.22
PABPC1-201ENST00000318607 FRG2BQ96QU4 278 aa13.66□□□□□ -0.22
PABPC1-201ENST00000318607 RETREG1Q9H6L5 497 aa13.66□□□□□ -0.22
PABPC1-201ENST00000318607 SGK2Q9HBY8 427 aa13.66□□□□□ -0.22
PABPC1-201ENST00000318607 MCUBQ9NWR8 336 aa13.66□□□□□ -0.22
PABPC1-201ENST00000318607 URB1O60287 2271 aaKnown RBP13.66□□□□□ -0.22
PABPC1-201ENST00000318607 C2orf92A0A1B0GVN3 265 aa13.65□□□□□ -0.22
PABPC1-201ENST00000318607 C5orf58C9J3I9 102 aa13.65□□□□□ -0.22
PABPC1-201ENST00000318607 ACSL4O60488 711 aa13.65□□□□□ -0.22
PABPC1-201ENST00000318607 KLKB1P03952 638 aa13.65□□□□□ -0.22
PABPC1-201ENST00000318607 GJA1P17302 382 aa13.65□□□□□ -0.22
PABPC1-201ENST00000318607 CYP2A7P20853 494 aa13.65□□□□□ -0.22
PABPC1-201ENST00000318607 SUOXP51687 545 aa13.65□□□□□ -0.22
PABPC1-201ENST00000318607 ALG1LQ6GMV1 187 aa13.65□□□□□ -0.22
PABPC1-201ENST00000318607 CASP12Q6UXS9 341 aa13.65□□□□□ -0.22
PABPC1-201ENST00000318607 UBQLNLQ8IYU4 475 aa13.65□□□□□ -0.22
PABPC1-201ENST00000318607 VPS37AQ8NEZ2 397 aa13.65□□□□□ -0.22
PABPC1-201ENST00000318607 IPCEF1Q8WWN9 437 aaPredicted RBP13.65□□□□□ -0.22
PABPC1-201ENST00000318607 TRIB2Q92519 343 aa13.65□□□□□ -0.22
PABPC1-201ENST00000318607 FRMD6Q96NE9 622 aa13.65□□□□□ -0.22
PABPC1-201ENST00000318607 OR2A14Q96R47 310 aa13.65□□□□□ -0.22
PABPC1-201ENST00000318607 RACGAP1Q9H0H5 632 aa13.65□□□□□ -0.22
PABPC1-201ENST00000318607 GALNT9Q9HCQ5 603 aa13.65□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms