RNA–Protein interactions for RNA: ENST00000317677.9

CPNE1-201, Transcript of copine 1, humanhuman

TSL 1 (best) BASIC

Gene CPNE1, Length 1,961 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-201ENST00000317677 M0R3G1 203 aa12.54□□□□□ -0.4
CPNE1-201ENST00000317677 VEGFDO43915 354 aa12.54□□□□□ -0.4
CPNE1-201ENST00000317677 C1orf105O95561 183 aa12.54□□□□□ -0.4
CPNE1-201ENST00000317677 CLIC3O95833 236 aa12.54□□□□□ -0.4
CPNE1-201ENST00000317677 SLC16A8O95907 504 aa12.54□□□□□ -0.4
CPNE1-201ENST00000317677 IL32P24001 234 aa12.54□□□□□ -0.4
CPNE1-201ENST00000317677 ACADLP28330 430 aa12.54□□□□□ -0.4
CPNE1-201ENST00000317677 TARDBPQ13148 414 aaKnown RBP eCLIP12.54□□□□□ -0.4
CPNE1-201ENST00000317677 AGERQ15109 404 aa12.54□□□□□ -0.4
CPNE1-201ENST00000317677 PAGE3Q5JUK9 113 aa12.54□□□□□ -0.4
CPNE1-201ENST00000317677 NDUFAF5Q5TEU4 345 aa12.54□□□□□ -0.4
CPNE1-201ENST00000317677 ZNF776Q68DI1 518 aaPredicted RBP12.54□□□□□ -0.4
CPNE1-201ENST00000317677 OFCC1Q8IZS5 231 aa12.54□□□□□ -0.4
CPNE1-201ENST00000317677 RNF175Q8N4F7 328 aa12.54□□□□□ -0.4
CPNE1-201ENST00000317677 TP53I13Q8NBR0 393 aaPredicted RBP12.54□□□□□ -0.4
CPNE1-201ENST00000317677 PAPD5Q8NDF8 572 aaKnown RBP12.54□□□□□ -0.4
CPNE1-201ENST00000317677 OR7A2PQ8NGA2 310 aa12.54□□□□□ -0.4
CPNE1-201ENST00000317677 DYNC2LI1Q8TCX1 351 aa12.54□□□□□ -0.4
CPNE1-201ENST00000317677 DEPDC7Q96QD5 511 aa12.54□□□□□ -0.4
CPNE1-201ENST00000317677 LRFN3Q9BTN0 628 aa12.54□□□□□ -0.4
CPNE1-201ENST00000317677 CHID1Q9BWS9 393 aa12.54□□□□□ -0.4
CPNE1-201ENST00000317677 GON7Q9BXV9 100 aa12.54□□□□□ -0.4
CPNE1-201ENST00000317677 ACPTQ9BZG2 426 aa12.54□□□□□ -0.4
CPNE1-201ENST00000317677 TM7SF3Q9NS93 570 aa12.54□□□□□ -0.4
CPNE1-201ENST00000317677 ZIM2Q9NZV7 527 aa12.54□□□□□ -0.4
CPNE1-201ENST00000317677 OAZ3Q9UMX2 235 aa12.54□□□□□ -0.4
CPNE1-201ENST00000317677 PCDHGB1Q9Y5G3 927 aa12.54□□□□□ -0.4
CPNE1-201ENST00000317677 PCDHGA8Q9Y5G5 932 aa12.54□□□□□ -0.4
CPNE1-201ENST00000317677 BBIP1A8MTZ0 92 aa12.54□□□□□ -0.4
CPNE1-201ENST00000317677 ULK1O75385 1050 aa12.54□□□□□ -0.4
CPNE1-201ENST00000317677 SLC22A3O75751 556 aa12.54□□□□□ -0.4
CPNE1-201ENST00000317677 TSPAN9O75954 239 aa12.54□□□□□ -0.4
CPNE1-201ENST00000317677 KLF8O95600 359 aaPredicted RBP12.54□□□□□ -0.4
CPNE1-201ENST00000317677 CATP04040 527 aaKnown RBP12.54□□□□□ -0.4
CPNE1-201ENST00000317677 GPIP06744 558 aa12.54□□□□□ -0.4
CPNE1-201ENST00000317677 ACVR2AP27037 513 aa12.54□□□□□ -0.4
CPNE1-201ENST00000317677 YAP1P46937 504 aaKnown RBP12.54□□□□□ -0.4
CPNE1-201ENST00000317677 RPL38P63173 70 aaKnown RBP12.54□□□□□ -0.4
CPNE1-201ENST00000317677 BNIP2Q12982 314 aa12.54□□□□□ -0.4
CPNE1-201ENST00000317677 NAE1Q13564 534 aa12.54□□□□□ -0.4
CPNE1-201ENST00000317677 KIAA0040Q15053 153 aa12.54□□□□□ -0.4
CPNE1-201ENST00000317677 IRF4Q15306 451 aa12.54□□□□□ -0.4
CPNE1-201ENST00000317677 RPS6KA2Q15349 733 aa12.54□□□□□ -0.4
CPNE1-201ENST00000317677 CYP20A1Q6UW02 462 aa12.54□□□□□ -0.4
CPNE1-201ENST00000317677 SUSD1Q6UWL2 747 aa12.54□□□□□ -0.4
CPNE1-201ENST00000317677 THOC6Q86W42 341 aaKnown RBP12.54□□□□□ -0.4
CPNE1-201ENST00000317677 OR2L2Q8NH16 312 aa12.54□□□□□ -0.4
CPNE1-201ENST00000317677 OR56A3Q8NH54 315 aa12.54□□□□□ -0.4
CPNE1-201ENST00000317677 TMEM246Q9BRR3 403 aa12.54□□□□□ -0.4
CPNE1-201ENST00000317677 ZDHHC5Q9C0B5 715 aa12.54□□□□□ -0.4
CPNE1-201ENST00000317677 OR52A5Q9H2C5 316 aa12.54□□□□□ -0.4
CPNE1-201ENST00000317677 TM9SF3Q9HD45 589 aa12.54□□□□□ -0.4
CPNE1-201ENST00000317677 CD93Q9NPY3 652 aa12.54□□□□□ -0.4
CPNE1-201ENST00000317677 C12orf4Q9NQ89 552 aa12.54□□□□□ -0.4
CPNE1-201ENST00000317677 POLE4Q9NR33 117 aa12.54□□□□□ -0.4
CPNE1-201ENST00000317677 WARS2Q9UGM6 360 aaKnown RBP12.54□□□□□ -0.4
CPNE1-201ENST00000317677 MUTYHQ9UIF7 546 aa12.54□□□□□ -0.4
CPNE1-201ENST00000317677 GPR34Q9UPC5 381 aa12.54□□□□□ -0.4
CPNE1-201ENST00000317677 SH2B3Q9UQQ2 575 aa12.54□□□□□ -0.4
CPNE1-201ENST00000317677 CAB39Q9Y376 341 aaPredicted RBP12.54□□□□□ -0.4
CPNE1-201ENST00000317677 PMF1-BGLAPU3KQ54 211 aa12.54□□□□□ -0.4
CPNE1-201ENST00000317677 MYO10Q9HD67 2058 aa12.53□□□□□ -0.4
CPNE1-201ENST00000317677 C17orf113A0A1B0GUU1 675 aa12.53□□□□□ -0.4
CPNE1-201ENST00000317677 SNTNA6NMZ2 147 aa12.53□□□□□ -0.4
CPNE1-201ENST00000317677 E7EQ34 232 aa12.53□□□□□ -0.4
CPNE1-201ENST00000317677 SLC28A1O00337 649 aa12.53□□□□□ -0.4
CPNE1-201ENST00000317677 PAK4O96013 591 aaPredicted RBP12.53□□□□□ -0.4
CPNE1-201ENST00000317677 SLC2A4P14672 509 aa12.53□□□□□ -0.4
CPNE1-201ENST00000317677 PSMA4P25789 261 aaKnown RBP12.53□□□□□ -0.4
CPNE1-201ENST00000317677 DDOSTP39656 456 aa12.53□□□□□ -0.4
CPNE1-201ENST00000317677 OR3A3P47888 321 aa12.53□□□□□ -0.4
CPNE1-201ENST00000317677 SLC13A2Q13183 592 aa12.53□□□□□ -0.4
CPNE1-201ENST00000317677 CHIT1Q13231 466 aa12.53□□□□□ -0.4
CPNE1-201ENST00000317677 TOP3AQ13472 1001 aaPredicted RBP12.53□□□□□ -0.4
CPNE1-201ENST00000317677 GTF2H3Q13889 308 aa12.53□□□□□ -0.4
CPNE1-201ENST00000317677 CAPRIN1Q14444 709 aaKnown RBP12.53□□□□□ -0.4
CPNE1-201ENST00000317677 YIF1BQ5BJH7 314 aa12.53□□□□□ -0.4
CPNE1-201ENST00000317677 ATAD3CQ5T2N8 411 aa12.53□□□□□ -0.4
CPNE1-201ENST00000317677 LCN8Q6JVE9 175 aa12.53□□□□□ -0.4
CPNE1-201ENST00000317677 ZFAND4Q86XD8 727 aa12.53□□□□□ -0.4
CPNE1-201ENST00000317677 CACTIN-AS1Q8N1I8 211 aa12.53□□□□□ -0.4
CPNE1-201ENST00000317677 FAM109AQ8N4B1 249 aa12.53□□□□□ -0.4
CPNE1-201ENST00000317677 FBXO15Q8NCQ5 510 aaPredicted RBP12.53□□□□□ -0.4
CPNE1-201ENST00000317677 ZNF480Q8WV37 535 aa12.53□□□□□ -0.4
CPNE1-201ENST00000317677 JPH3Q8WXH2 748 aaPredicted RBP12.53□□□□□ -0.4
CPNE1-201ENST00000317677 HTRA1Q92743 480 aa12.53□□□□□ -0.4
CPNE1-201ENST00000317677 PPP3R2Q96LZ3 170 aa12.53□□□□□ -0.4
CPNE1-201ENST00000317677 NRTNQ99748 197 aa12.53□□□□□ -0.4
CPNE1-201ENST00000317677 BTBD2Q9BX70 525 aa12.53□□□□□ -0.4
CPNE1-201ENST00000317677 TEX101Q9BY14 249 aa12.53□□□□□ -0.4
CPNE1-201ENST00000317677 TRIM8Q9BZR9 551 aa12.53□□□□□ -0.4
CPNE1-201ENST00000317677 IL1RL2Q9HB29 575 aa12.53□□□□□ -0.4
CPNE1-201ENST00000317677 FBXL12Q9NXK8 326 aa12.53□□□□□ -0.4
CPNE1-201ENST00000317677 SLAMF8Q9P0V8 285 aa12.53□□□□□ -0.4
CPNE1-201ENST00000317677 BAG5Q9UL15 447 aa12.53□□□□□ -0.4
CPNE1-201ENST00000317677 NDUFAF1Q9Y375 327 aa12.53□□□□□ -0.4
CPNE1-201ENST00000317677 OR1A2Q9Y585 309 aa12.53□□□□□ -0.4
CPNE1-201ENST00000317677 PIAS3Q9Y6X2 628 aa12.53□□□□□ -0.4
CPNE1-201ENST00000317677 A0A1W2PP18 115 aa12.52□□□□□ -0.4
CPNE1-201ENST00000317677 FAM86C2PA6NEL3 165 aa12.52□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms