RNA–Protein interactions for RNA: ENST00000309615.7

APTX-201, Transcript of aprataxin, humanhuman

TSL 1 (best) BASIC

Gene APTX, Length 1,859 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APTX-201ENST00000309615 SORT1Q99523 831 aa12.23□□□□□ -0.45
APTX-201ENST00000309615 C17orf62Q9BQA9 187 aa12.23□□□□□ -0.45
APTX-201ENST00000309615 CHST8Q9H2A9 424 aa12.23□□□□□ -0.45
APTX-201ENST00000309615 ANKHQ9HCJ1 492 aa12.23□□□□□ -0.45
APTX-201ENST00000309615 SLC22A11Q9NSA0 550 aa12.23□□□□□ -0.45
APTX-201ENST00000309615 NAALAD2Q9Y3Q0 740 aa12.23□□□□□ -0.45
APTX-201ENST00000309615 TRAF6Q9Y4K3 522 aa12.23□□□□□ -0.45
APTX-201ENST00000309615 ZNF860A6NHJ4 632 aa12.23□□□□□ -0.45
APTX-201ENST00000309615 SGK494L7N484 410 aa12.23□□□□□ -0.45
APTX-201ENST00000309615 RTCAO00442 366 aaKnown RBP12.23□□□□□ -0.45
APTX-201ENST00000309615 GALR3O60755 368 aaPredicted RBP12.23□□□□□ -0.45
APTX-201ENST00000309615 KLHL18O94889 574 aa12.23□□□□□ -0.45
APTX-201ENST00000309615 FGF4P08620 206 aa12.23□□□□□ -0.45
APTX-201ENST00000309615 PTX3P26022 381 aaPredicted RBP12.23□□□□□ -0.45
APTX-201ENST00000309615 NKAIN1Q4KMZ8 207 aa12.23□□□□□ -0.45
APTX-201ENST00000309615 DEPDC1Q5TB30 811 aa12.23□□□□□ -0.45
APTX-201ENST00000309615 KANK2Q63ZY3 851 aa12.23□□□□□ -0.45
APTX-201ENST00000309615 PRMT9Q6P2P2 845 aa12.23□□□□□ -0.45
APTX-201ENST00000309615 ZNF781Q8N8C0 355 aa12.23□□□□□ -0.45
APTX-201ENST00000309615 AMER3Q8N944 861 aa12.23□□□□□ -0.45
APTX-201ENST00000309615 SNIP1Q8TAD8 396 aaKnown RBP12.23□□□□□ -0.45
APTX-201ENST00000309615 DYDC1Q8WWB3 177 aa12.23□□□□□ -0.45
APTX-201ENST00000309615 ZNF75CPQ92670 426 aaPredicted RBP12.23□□□□□ -0.45
APTX-201ENST00000309615 MVB12AQ96EY5 273 aa12.23□□□□□ -0.45
APTX-201ENST00000309615 DPH2Q9BQC3 489 aaPredicted RBP12.23□□□□□ -0.45
APTX-201ENST00000309615 SORBS1Q9BX66 1292 aaKnown RBP12.23□□□□□ -0.45
APTX-201ENST00000309615 ZNF304Q9HCX3 659 aa12.23□□□□□ -0.45
APTX-201ENST00000309615 DNAJC15Q9Y5T4 150 aa12.23□□□□□ -0.45
APTX-201ENST00000309615 PTGDR2Q9Y5Y4 395 aa12.23□□□□□ -0.45
APTX-201ENST00000309615 DNAJB6O75190 326 aa12.22□□□□□ -0.45
APTX-201ENST00000309615 SNNO75324 88 aaPredicted RBP12.22□□□□□ -0.45
APTX-201ENST00000309615 RDH16O75452 317 aa12.22□□□□□ -0.45
APTX-201ENST00000309615 NSA2O95478 260 aaKnown RBP12.22□□□□□ -0.45
APTX-201ENST00000309615 AGXTP21549 392 aa12.22□□□□□ -0.45
APTX-201ENST00000309615 STAT5AP42229 794 aa12.22□□□□□ -0.45
APTX-201ENST00000309615 AVPR1BP47901 424 aa12.22□□□□□ -0.45
APTX-201ENST00000309615 BTN3A2P78410 334 aa12.22□□□□□ -0.45
APTX-201ENST00000309615 CLN3Q13286 438 aa12.22□□□□□ -0.45
APTX-201ENST00000309615 UGT3A2Q3SY77 523 aa12.22□□□□□ -0.45
APTX-201ENST00000309615 TMEM35AQ53FP2 167 aa12.22□□□□□ -0.45
APTX-201ENST00000309615 ATG16L1Q676U5 607 aa12.22□□□□□ -0.45
APTX-201ENST00000309615 TRIM40Q6P9F5 258 aa12.22□□□□□ -0.45
APTX-201ENST00000309615 ABHD17CQ6PCB6 329 aa12.22□□□□□ -0.45
APTX-201ENST00000309615 FAM198BQ6UWH4 519 aa12.22□□□□□ -0.45
APTX-201ENST00000309615 COX15Q7KZN9 410 aa12.22□□□□□ -0.45
APTX-201ENST00000309615 TRIM42Q8IWZ5 723 aa12.22□□□□□ -0.45
APTX-201ENST00000309615 CLYBLQ8N0X4 340 aa12.22□□□□□ -0.45
APTX-201ENST00000309615 IL22RA1Q8N6P7 574 aa12.22□□□□□ -0.45
APTX-201ENST00000309615 RAB3IL1Q8TBN0 382 aa12.22□□□□□ -0.45
APTX-201ENST00000309615 COL26A1Q96A83 441 aa12.22□□□□□ -0.45
APTX-201ENST00000309615 ACPTQ9BZG2 426 aa12.22□□□□□ -0.45
APTX-201ENST00000309615 BRF2Q9HAW0 419 aa12.22□□□□□ -0.45
APTX-201ENST00000309615 PRDM7Q9NQW5 492 aa12.22□□□□□ -0.45
APTX-201ENST00000309615 WDR70Q9NW82 654 aa12.22□□□□□ -0.45
APTX-201ENST00000309615 PSD3Q9NYI0 1048 aa12.22□□□□□ -0.45
APTX-201ENST00000309615 PPT2Q9UMR5 302 aa12.22□□□□□ -0.45
APTX-201ENST00000309615 CDC14AQ9UNH5 594 aa12.22□□□□□ -0.45
APTX-201ENST00000309615 SLC12A4Q9UP95 1085 aa12.22□□□□□ -0.45
APTX-201ENST00000309615 PLPP1O14494 284 aa12.21□□□□□ -0.45
APTX-201ENST00000309615 KLF11O14901 512 aa12.21□□□□□ -0.45
APTX-201ENST00000309615 FBLP22087 321 aaKnown RBP12.21□□□□□ -0.45
APTX-201ENST00000309615 OLR1P78380 273 aa12.21□□□□□ -0.45
APTX-201ENST00000309615 MAT1AQ00266 395 aaKnown RBP12.21□□□□□ -0.45
APTX-201ENST00000309615 CUL3Q13618 768 aa12.21□□□□□ -0.45
APTX-201ENST00000309615 DSG2Q14126 1118 aa12.21□□□□□ -0.45
APTX-201ENST00000309615 SYT16Q17RD7 645 aa12.21□□□□□ -0.45
APTX-201ENST00000309615 ARHGAP40Q5TG30 622 aa12.21□□□□□ -0.45
APTX-201ENST00000309615 ZNF248Q8NDW4 579 aa12.21□□□□□ -0.45
APTX-201ENST00000309615 OR5T3Q8NGG3 340 aa12.21□□□□□ -0.45
APTX-201ENST00000309615 CT55Q8WUE5 264 aa12.21□□□□□ -0.45
APTX-201ENST00000309615 KCNE4Q8WWG9 221 aa12.21□□□□□ -0.45
APTX-201ENST00000309615 FAR2Q96K12 515 aa12.21□□□□□ -0.45
APTX-201ENST00000309615 KCNC2Q96PR1 638 aa12.21□□□□□ -0.45
APTX-201ENST00000309615 SERPINI1Q99574 410 aa12.21□□□□□ -0.45
APTX-201ENST00000309615 MRPL1Q9BYD6 325 aaKnown RBP12.21□□□□□ -0.45
APTX-201ENST00000309615 ILKAPQ9H0C8 392 aaPredicted RBP12.21□□□□□ -0.45
APTX-201ENST00000309615 TUBB1Q9H4B7 451 aa12.21□□□□□ -0.45
APTX-201ENST00000309615 THAP1Q9NVV9 213 aa12.21□□□□□ -0.45
APTX-201ENST00000309615 HCN3Q9P1Z3 774 aa12.21□□□□□ -0.45
APTX-201ENST00000309615 IFT80Q9P2H3 777 aaPredicted RBP12.21□□□□□ -0.45
APTX-201ENST00000309615 CROTQ9UKG9 612 aa12.21□□□□□ -0.45
APTX-201ENST00000309615 RAP2CQ9Y3L5 183 aa12.21□□□□□ -0.45
APTX-201ENST00000309615 AHCTF1Q8WYP5 2266 aa12.21□□□□□ -0.45
APTX-201ENST00000309615 FER1L5A0AVI2 2057 aa12.21□□□□□ -0.45
APTX-201ENST00000309615 LOC101059948A0A1B0GTJ6 334 aa12.21□□□□□ -0.46
APTX-201ENST00000309615 H0YIG0 161 aa12.21□□□□□ -0.46
APTX-201ENST00000309615 ONECUT2O95948 504 aa12.21□□□□□ -0.46
APTX-201ENST00000309615 TCN2P20062 427 aa12.21□□□□□ -0.46
APTX-201ENST00000309615 F8A1P23610 371 aa12.21□□□□□ -0.46
APTX-201ENST00000309615 RAP1GDS1P52306 607 aa12.21□□□□□ -0.46
APTX-201ENST00000309615 FOXL2P58012 376 aa12.21□□□□□ -0.46
APTX-201ENST00000309615 HMGCS1Q01581 520 aa12.21□□□□□ -0.46
APTX-201ENST00000309615 TGM3Q08188 693 aa12.21□□□□□ -0.46
APTX-201ENST00000309615 CSTF3Q12996 717 aaKnown RBP12.21□□□□□ -0.46
APTX-201ENST00000309615 SRSF6Q13247 344 aaKnown RBP12.21□□□□□ -0.46
APTX-201ENST00000309615 MLIPQ5VWP3 458 aa12.21□□□□□ -0.46
APTX-201ENST00000309615 ZNF793Q6ZN11 406 aa12.21□□□□□ -0.46
APTX-201ENST00000309615 VASH2Q86V25 355 aa12.21□□□□□ -0.46
APTX-201ENST00000309615 ARFGAP2Q8N6H7 521 aa12.21□□□□□ -0.46
APTX-201ENST00000309615 SRFBP1Q8NEF9 429 aaKnown RBP12.21□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms