RNA–Protein interactions for RNA: ENST00000309017.7

PTPN7-201, Transcript of protein tyrosine phosphatase, non-receptor type 7, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PTPN7, Length 3,765 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN7-201ENST00000309017 TSPAN33Q86UF1 283 aa10.72□□□□□ -0.69
PTPN7-201ENST00000309017 SERINC5Q86VE9 423 aa10.72□□□□□ -0.69
PTPN7-201ENST00000309017 SIMC1Q8NDZ2 872 aa10.72□□□□□ -0.69
PTPN7-201ENST00000309017 UBTD2Q8WUN7 234 aa10.72□□□□□ -0.69
PTPN7-201ENST00000309017 NECTIN4Q96NY8 510 aa10.72□□□□□ -0.69
PTPN7-201ENST00000309017 SGK2Q9HBY8 427 aa10.72□□□□□ -0.69
PTPN7-201ENST00000309017 ENOPH1Q9UHY7 261 aa10.72□□□□□ -0.69
PTPN7-201ENST00000309017 PCDHGB2Q9Y5G2 931 aa10.72□□□□□ -0.69
PTPN7-201ENST00000309017 DNMT3AQ9Y6K1 912 aaPredicted RBP10.72□□□□□ -0.69
PTPN7-201ENST00000309017 KPNA5O15131 536 aa10.72□□□□□ -0.69
PTPN7-201ENST00000309017 F11P03951 625 aa10.72□□□□□ -0.69
PTPN7-201ENST00000309017 SNRPD2P62316 118 aaKnown RBP10.72□□□□□ -0.69
PTPN7-201ENST00000309017 HNRNPA0Q13151 305 aaKnown RBP10.72□□□□□ -0.69
PTPN7-201ENST00000309017 SPHARQ15513 63 aa10.72□□□□□ -0.69
PTPN7-201ENST00000309017 GPAT3Q53EU6 434 aa10.72□□□□□ -0.69
PTPN7-201ENST00000309017 LRRC73Q5JTD7 316 aa10.72□□□□□ -0.69
PTPN7-201ENST00000309017 SYNPOQ8N3V7 929 aa10.72□□□□□ -0.69
PTPN7-201ENST00000309017 GFM1Q96RP9 751 aaKnown RBP10.72□□□□□ -0.69
PTPN7-201ENST00000309017 SDHCQ99643 169 aaPredicted RBP10.72□□□□□ -0.69
PTPN7-201ENST00000309017 RDH14Q9HBH5 336 aa10.72□□□□□ -0.69
PTPN7-201ENST00000309017 CFAP20Q9Y6A4 193 aaKnown RBP10.72□□□□□ -0.69
PTPN7-201ENST00000309017 DOCK3Q8IZD9 2030 aa10.72□□□□□ -0.69
PTPN7-201ENST00000309017 OTOFQ9HC10 1997 aa10.71□□□□□ -0.69
PTPN7-201ENST00000309017 C5orf58C9J3I9 102 aa10.71□□□□□ -0.69
PTPN7-201ENST00000309017 FAM227AF5H4B4 570 aa10.71□□□□□ -0.69
PTPN7-201ENST00000309017 SCO2O43819 266 aa10.71□□□□□ -0.69
PTPN7-201ENST00000309017 OR10H3O60404 316 aa10.71□□□□□ -0.69
PTPN7-201ENST00000309017 UGT2B17O75795 530 aa10.71□□□□□ -0.69
PTPN7-201ENST00000309017 KLKB1P03952 638 aa10.71□□□□□ -0.69
PTPN7-201ENST00000309017 PSKH1P11801 424 aa10.71□□□□□ -0.69
PTPN7-201ENST00000309017 CCR7P32248 378 aa10.71□□□□□ -0.69
PTPN7-201ENST00000309017 CYP4F8P98187 520 aa10.71□□□□□ -0.69
PTPN7-201ENST00000309017 GAB1Q13480 694 aa10.71□□□□□ -0.69
PTPN7-201ENST00000309017 ANXA8L1Q5VT79 327 aa10.71□□□□□ -0.69
PTPN7-201ENST00000309017 PRR23CQ6ZRP0 262 aa10.71□□□□□ -0.69
PTPN7-201ENST00000309017 RNF130Q86XS8 419 aa10.71□□□□□ -0.69
PTPN7-201ENST00000309017 TP53INP1Q96A56 240 aa10.71□□□□□ -0.69
PTPN7-201ENST00000309017 MS4A4AQ96JQ5 239 aa10.71□□□□□ -0.69
PTPN7-201ENST00000309017 SLC35A5Q9BS91 424 aa10.71□□□□□ -0.69
PTPN7-201ENST00000309017 GPR62Q9BZJ7 368 aa10.71□□□□□ -0.69
PTPN7-201ENST00000309017 STMN3Q9NZ72 180 aa10.71□□□□□ -0.69
PTPN7-201ENST00000309017 CLEC2DQ9UHP7 191 aa10.71□□□□□ -0.69
PTPN7-201ENST00000309017 CD84Q9UIB8 345 aa10.71□□□□□ -0.69
PTPN7-201ENST00000309017 PADI2Q9Y2J8 665 aa10.71□□□□□ -0.69
PTPN7-201ENST00000309017 ZSCAN5BA6NJL1 495 aa10.71□□□□□ -0.69
PTPN7-201ENST00000309017 OR6C75A6NL08 312 aa10.71□□□□□ -0.69
PTPN7-201ENST00000309017 GABRR3A8MPY1 467 aa10.71□□□□□ -0.69
PTPN7-201ENST00000309017 ENTPD6O75354 484 aa10.71□□□□□ -0.69
PTPN7-201ENST00000309017 TNFRSF21O75509 655 aa10.71□□□□□ -0.69
PTPN7-201ENST00000309017 IFNA14P01570 189 aa10.71□□□□□ -0.69
PTPN7-201ENST00000309017 EPORP19235 508 aa10.71□□□□□ -0.69
PTPN7-201ENST00000309017 PTX3P26022 381 aaPredicted RBP10.71□□□□□ -0.69
PTPN7-201ENST00000309017 MRPL28Q13084 256 aaKnown RBP10.71□□□□□ -0.69
PTPN7-201ENST00000309017 NAE1Q13564 534 aa10.71□□□□□ -0.69
PTPN7-201ENST00000309017 VEPH1Q14D04 833 aa10.71□□□□□ -0.69
PTPN7-201ENST00000309017 LEXMQ3ZCV2 418 aa10.71□□□□□ -0.69
PTPN7-201ENST00000309017 ADGRF1Q5T601 910 aa10.71□□□□□ -0.69
PTPN7-201ENST00000309017 LDLRAD1Q5T700 205 aa10.71□□□□□ -0.69
PTPN7-201ENST00000309017 MFSD14CQ5VZR4 134 aa10.71□□□□□ -0.69
PTPN7-201ENST00000309017 TYW3Q6IPR3 259 aaKnown RBP10.71□□□□□ -0.69
PTPN7-201ENST00000309017 PAMR1Q6UXH9 720 aa10.71□□□□□ -0.69
PTPN7-201ENST00000309017 ELMOD2Q8IZ81 293 aa10.71□□□□□ -0.69
PTPN7-201ENST00000309017 ASB15Q8WXK1 588 aa10.71□□□□□ -0.69
PTPN7-201ENST00000309017 SLC7A6Q92536 515 aa10.71□□□□□ -0.69
PTPN7-201ENST00000309017 C1GALT1C1Q96EU7 318 aa10.71□□□□□ -0.69
PTPN7-201ENST00000309017 XRN2Q9H0D6 950 aaKnown RBP eCLIP10.71□□□□□ -0.694e-10■■■■■ 31.1
PTPN7-201ENST00000309017 SLA2Q9H6Q3 261 aa10.71□□□□□ -0.69
PTPN7-201ENST00000309017 C3orf14Q9HBI5 128 aa10.71□□□□□ -0.69
PTPN7-201ENST00000309017 LHX3Q9UBR4 397 aa10.71□□□□□ -0.69
PTPN7-201ENST00000309017 TLR4O00206 839 aa10.71□□□□□ -0.7
PTPN7-201ENST00000309017 COCHO43405 550 aa10.71□□□□□ -0.7
PTPN7-201ENST00000309017 ARHGEF15O94989 841 aa10.71□□□□□ -0.7
PTPN7-201ENST00000309017 CYP17A1P05093 508 aa10.71□□□□□ -0.7
PTPN7-201ENST00000309017 AOAHP28039 575 aa10.71□□□□□ -0.7
PTPN7-201ENST00000309017 CSKP41240 450 aa10.71□□□□□ -0.7
PTPN7-201ENST00000309017 WNT3P56703 355 aa10.71□□□□□ -0.7
PTPN7-201ENST00000309017 MACC1Q6ZN28 852 aa10.71□□□□□ -0.7
PTPN7-201ENST00000309017 SZRD1Q7Z422 152 aa10.71□□□□□ -0.7
PTPN7-201ENST00000309017 KLHL6Q8WZ60 621 aa10.71□□□□□ -0.7
PTPN7-201ENST00000309017 TRPM5Q9NZQ8 1165 aa10.71□□□□□ -0.7
PTPN7-201ENST00000309017 ZNF282Q9UDV7 671 aaPredicted RBP10.71□□□□□ -0.7
PTPN7-201ENST00000309017 GABRQQ9UN88 632 aa10.71□□□□□ -0.7
PTPN7-201ENST00000309017 A0A075B6Q4 140 aa10.7□□□□□ -0.7
PTPN7-201ENST00000309017 A0A1W2PQL4 384 aaPredicted RBP10.7□□□□□ -0.7
PTPN7-201ENST00000309017 TRBC2A0A5B9 178 aa10.7□□□□□ -0.7
PTPN7-201ENST00000309017 SCAMP2O15127 329 aaKnown RBP10.7□□□□□ -0.7
PTPN7-201ENST00000309017 YY2O15391 372 aa10.7□□□□□ -0.7
PTPN7-201ENST00000309017 MPZL2O60487 215 aa10.7□□□□□ -0.7
PTPN7-201ENST00000309017 PCGF2P35227 344 aa10.7□□□□□ -0.7
PTPN7-201ENST00000309017 RFX2P48378 723 aa10.7□□□□□ -0.7
PTPN7-201ENST00000309017 CRISP1P54107 249 aa10.7□□□□□ -0.7
PTPN7-201ENST00000309017 AP1S1P61966 158 aa10.7□□□□□ -0.7
PTPN7-201ENST00000309017 MTAPQ13126 283 aa10.7□□□□□ -0.7
PTPN7-201ENST00000309017 IRF3Q14653 427 aa10.7□□□□□ -0.7
PTPN7-201ENST00000309017 SSX1Q16384 188 aa10.7□□□□□ -0.7
PTPN7-201ENST00000309017 GPR33Q49SQ1 333 aa10.7□□□□□ -0.7
PTPN7-201ENST00000309017 FAM209AQ5JX71 171 aa10.7□□□□□ -0.7
PTPN7-201ENST00000309017 COX20Q5RI15 118 aa10.7□□□□□ -0.7
PTPN7-201ENST00000309017 RETSATQ6NUM9 610 aa10.7□□□□□ -0.7
PTPN7-201ENST00000309017 USP30Q70CQ3 517 aa10.7□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 58.8 ms