RNA–Protein interactions for RNA: ENST00000308580.11

TMOD3-201, Transcript of tropomodulin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TMOD3, Length 8,255 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMOD3-201ENST00000308580 PLEKHA1Q9HB21 404 aa9.55□□□□□ -0.88
TMOD3-201ENST00000308580 C4BP0C0L5 1744 aa9.55□□□□□ -0.88
TMOD3-201ENST00000308580 ASGR2P07307 311 aa9.55□□□□□ -0.88
TMOD3-201ENST00000308580 MLLT3P42568 568 aaPredicted RBP9.55□□□□□ -0.88
TMOD3-201ENST00000308580 STARP49675 285 aa9.55□□□□□ -0.88
TMOD3-201ENST00000308580 CGB2Q6NT52 195 aa9.55□□□□□ -0.88
TMOD3-201ENST00000308580 ZNF676Q8N7Q3 588 aa9.55□□□□□ -0.88
TMOD3-201ENST00000308580 SMPDL3BQ92485 455 aa9.55□□□□□ -0.88
TMOD3-201ENST00000308580 CNDP2Q96KP4 475 aaKnown RBP9.55□□□□□ -0.88
TMOD3-201ENST00000308580 CDC14AQ9UNH5 594 aa9.55□□□□□ -0.88
TMOD3-201ENST00000308580 PCDHGB7Q9Y5F8 929 aa9.55□□□□□ -0.88
TMOD3-201ENST00000308580 KIF13AQ9H1H9 1805 aa9.54□□□□□ -0.88
TMOD3-201ENST00000308580 CAPN3P20807 821 aa9.54□□□□□ -0.88
TMOD3-201ENST00000308580 GBX2P52951 348 aaPredicted RBP9.54□□□□□ -0.88
TMOD3-201ENST00000308580 PIGFQ07326 219 aa9.54□□□□□ -0.88
TMOD3-201ENST00000308580 PRRT3Q5FWE3 981 aa9.54□□□□□ -0.88
TMOD3-201ENST00000308580 SHQ1Q6PI26 577 aaKnown RBP9.54□□□□□ -0.88
TMOD3-201ENST00000308580 HACD2Q6Y1H2 254 aa9.54□□□□□ -0.88
TMOD3-201ENST00000308580 OR52E4Q8NGH9 312 aa9.54□□□□□ -0.88
TMOD3-201ENST00000308580 DMRTB1Q96MA1 342 aa9.54□□□□□ -0.88
TMOD3-201ENST00000308580 RDH12Q96NR8 316 aa9.54□□□□□ -0.88
TMOD3-201ENST00000308580 F2RL3Q96RI0 385 aa9.54□□□□□ -0.88
TMOD3-201ENST00000308580 HERC2P3Q9BVR0 1158 aa9.54□□□□□ -0.88
TMOD3-201ENST00000308580 ADH1BP00325 375 aa9.54□□□□□ -0.88
TMOD3-201ENST00000308580 RENP00797 406 aa9.54□□□□□ -0.88
TMOD3-201ENST00000308580 ZNF182P17025 639 aaPredicted RBP9.54□□□□□ -0.88
TMOD3-201ENST00000308580 KCNA5P22460 613 aa9.54□□□□□ -0.88
TMOD3-201ENST00000308580 PPP3R1P63098 170 aa9.54□□□□□ -0.88
TMOD3-201ENST00000308580 NTHL1P78549 312 aa9.54□□□□□ -0.88
TMOD3-201ENST00000308580 AKIRIN2Q53H80 203 aa9.54□□□□□ -0.88
TMOD3-201ENST00000308580 TNFAIP8L3Q5GJ75 292 aa9.54□□□□□ -0.88
TMOD3-201ENST00000308580 TMEM174Q8WUU8 243 aa9.54□□□□□ -0.88
TMOD3-201ENST00000308580 FAM129BQ96TA1 746 aa9.54□□□□□ -0.88
TMOD3-201ENST00000308580 SORT1Q99523 831 aa9.54□□□□□ -0.88
TMOD3-201ENST00000308580 C1QTNF1Q9BXJ1 281 aa9.54□□□□□ -0.88
TMOD3-201ENST00000308580 IL26Q9NPH9 171 aa9.54□□□□□ -0.88
TMOD3-201ENST00000308580 TMEM9Q9P0T7 183 aa9.54□□□□□ -0.88
TMOD3-201ENST00000308580 RNF6Q9Y252 685 aa9.54□□□□□ -0.88
TMOD3-201ENST00000308580 CCDC88AQ3V6T2 1871 aa9.54□□□□□ -0.88
TMOD3-201ENST00000308580 ORC5O43913 435 aa9.54□□□□□ -0.88
TMOD3-201ENST00000308580 PCDHGA12O60330 932 aa9.54□□□□□ -0.88
TMOD3-201ENST00000308580 ZNF3P17036 446 aa9.54□□□□□ -0.88
TMOD3-201ENST00000308580 CXCR1P25024 350 aa9.54□□□□□ -0.88
TMOD3-201ENST00000308580 SLC6A4P31645 630 aa9.54□□□□□ -0.88
TMOD3-201ENST00000308580 APLP1P51693 650 aa9.54□□□□□ -0.88
TMOD3-201ENST00000308580 GFOD2Q3B7J2 385 aa9.54□□□□□ -0.88
TMOD3-201ENST00000308580 PIGGQ5H8A4 983 aa9.54□□□□□ -0.88
TMOD3-201ENST00000308580 PIANPQ8IYJ0 282 aa9.54□□□□□ -0.88
TMOD3-201ENST00000308580 FIBINQ8TAL6 211 aa9.54□□□□□ -0.88
TMOD3-201ENST00000308580 HDAC2Q92769 488 aaKnown RBP9.54□□□□□ -0.88
TMOD3-201ENST00000308580 MCHR1Q99705 422 aa9.54□□□□□ -0.88
TMOD3-201ENST00000308580 TIAM2Q8IVF5 1701 aa9.54□□□□□ -0.88
TMOD3-201ENST00000308580 NME4O00746 187 aa9.54□□□□□ -0.88
TMOD3-201ENST00000308580 HNRNPA1P09651 372 aaKnown RBP eCLIP9.54□□□□□ -0.88
TMOD3-201ENST00000308580 SRCP12931 536 aa9.54□□□□□ -0.88
TMOD3-201ENST00000308580 HSD3B1P14060 373 aa9.54□□□□□ -0.88
TMOD3-201ENST00000308580 UQCRC2P22695 453 aa9.54□□□□□ -0.88
TMOD3-201ENST00000308580 HSD3B2P26439 372 aa9.54□□□□□ -0.88
TMOD3-201ENST00000308580 CLDN8P56748 225 aa9.54□□□□□ -0.88
TMOD3-201ENST00000308580 MC1RQ01726 317 aa9.54□□□□□ -0.88
TMOD3-201ENST00000308580 CSTF1Q05048 431 aaKnown RBP9.54□□□□□ -0.88
TMOD3-201ENST00000308580 EOGTQ5NDL2 527 aa9.54□□□□□ -0.88
TMOD3-201ENST00000308580 C6orf141Q5SZD1 244 aa9.54□□□□□ -0.88
TMOD3-201ENST00000308580 MCEMP1Q8IX19 187 aa9.54□□□□□ -0.88
TMOD3-201ENST00000308580 ERVK-11Q9UQG0 969 aa9.54□□□□□ -0.88
TMOD3-201ENST00000308580 SOCS7O14512 581 aa9.54□□□□□ -0.88
TMOD3-201ENST00000308580 KAT7O95251 611 aa9.54□□□□□ -0.88
TMOD3-201ENST00000308580 RASAL1O95294 804 aa9.54□□□□□ -0.88
TMOD3-201ENST00000308580 CD9P21926 228 aa9.54□□□□□ -0.88
TMOD3-201ENST00000308580 AP3S2P59780 193 aa9.54□□□□□ -0.88
TMOD3-201ENST00000308580 MS4A2Q01362 244 aa9.54□□□□□ -0.88
TMOD3-201ENST00000308580 GALNT1Q10472 559 aaPredicted RBP9.54□□□□□ -0.88
TMOD3-201ENST00000308580 SLC22A15Q8IZD6 547 aa9.54□□□□□ -0.88
TMOD3-201ENST00000308580 PJA1Q8NG27 643 aa9.54□□□□□ -0.88
TMOD3-201ENST00000308580 CD180Q99467 661 aa9.54□□□□□ -0.88
TMOD3-201ENST00000308580 TRIM2Q9C040 744 aa9.54□□□□□ -0.88
TMOD3-201ENST00000308580 H0YAE9 185 aa9.54□□□□□ -0.88
TMOD3-201ENST00000308580 TNFRSF10BO14763 440 aa9.54□□□□□ -0.88
TMOD3-201ENST00000308580 IFI30P13284 250 aa9.54□□□□□ -0.88
TMOD3-201ENST00000308580 GCAP28676 217 aa9.54□□□□□ -0.88
TMOD3-201ENST00000308580 BMP8BP34820 402 aa9.54□□□□□ -0.88
TMOD3-201ENST00000308580 MLLT1Q03111 559 aaPredicted RBP9.54□□□□□ -0.88
TMOD3-201ENST00000308580 BMP8AQ7Z5Y6 402 aa9.54□□□□□ -0.88
TMOD3-201ENST00000308580 CARM1Q86X55 608 aa9.54□□□□□ -0.88
TMOD3-201ENST00000308580 MARVELD2Q8N4S9 558 aa9.54□□□□□ -0.88
TMOD3-201ENST00000308580 RAB7BQ96AH8 199 aa9.54□□□□□ -0.88
TMOD3-201ENST00000308580 HSPBAP1Q96EW2 488 aa9.54□□□□□ -0.88
TMOD3-201ENST00000308580 OR2M4Q96R27 311 aa9.54□□□□□ -0.88
TMOD3-201ENST00000308580 GSTO2Q9H4Y5 243 aa9.54□□□□□ -0.88
TMOD3-201ENST00000308580 NAV1Q8NEY1 1877 aa9.54□□□□□ -0.88
TMOD3-201ENST00000308580 HEPACAM2A8MVW5 462 aa9.53□□□□□ -0.88
TMOD3-201ENST00000308580 SMAD6O43541 496 aaKnown RBP9.53□□□□□ -0.88
TMOD3-201ENST00000308580 COQ9O75208 318 aa9.53□□□□□ -0.88
TMOD3-201ENST00000308580 CLPXO76031 633 aa9.53□□□□□ -0.88
TMOD3-201ENST00000308580 VBP1P61758 197 aa9.53□□□□□ -0.88
TMOD3-201ENST00000308580 FAM189BP81408 668 aa9.53□□□□□ -0.88
TMOD3-201ENST00000308580 LINGO2Q7L985 606 aa9.53□□□□□ -0.88
TMOD3-201ENST00000308580 GALNT10Q86SR1 603 aa9.53□□□□□ -0.88
TMOD3-201ENST00000308580 HUS1BQ8NHY5 278 aa9.53□□□□□ -0.88
TMOD3-201ENST00000308580 OR5P2Q8WZ92 322 aa9.53□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 50.9 ms