RNA–Protein interactions for RNA: ENST00000305364.8

TRIM35-201, Transcript of tripartite motif containing 35, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM35, Length 4,229 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM35-201ENST00000305364 RGMBQ6NW40 437 aa12.57□□□□□ -0.4
TRIM35-201ENST00000305364 XKRXQ6PP77 449 aa12.57□□□□□ -0.4
TRIM35-201ENST00000305364 MSRB3Q8IXL7 192 aa12.57□□□□□ -0.4
TRIM35-201ENST00000305364 C7orf57Q8NEG2 295 aa12.57□□□□□ -0.4
TRIM35-201ENST00000305364 OR4K1Q8NGD4 311 aa12.57□□□□□ -0.4
TRIM35-201ENST00000305364 MYO19Q96H55 970 aa12.57□□□□□ -0.4
TRIM35-201ENST00000305364 FOPNLQ96NB1 174 aa12.57□□□□□ -0.4
TRIM35-201ENST00000305364 MCUBQ9NWR8 336 aa12.57□□□□□ -0.4
TRIM35-201ENST00000305364 FAM120CQ9NX05 1096 aaKnown RBP12.57□□□□□ -0.4
TRIM35-201ENST00000305364 NKIRAS2Q9NYR9 191 aa12.57□□□□□ -0.4
TRIM35-201ENST00000305364 TRPC4Q9UBN4 977 aa12.57□□□□□ -0.4
TRIM35-201ENST00000305364 OARD1Q9Y530 152 aa12.57□□□□□ -0.4
TRIM35-201ENST00000305364 PHIPQ8WWQ0 1821 aa12.57□□□□□ -0.4
TRIM35-201ENST00000305364 TLX2O43763 284 aaPredicted RBP12.56□□□□□ -0.4
TRIM35-201ENST00000305364 CYP17A1P05093 508 aa12.56□□□□□ -0.4
TRIM35-201ENST00000305364 PBLDP30039 288 aaPredicted RBP12.56□□□□□ -0.4
TRIM35-201ENST00000305364 RGRP47804 291 aa12.56□□□□□ -0.4
TRIM35-201ENST00000305364 ACLYP53396 1101 aa12.56□□□□□ -0.4
TRIM35-201ENST00000305364 GPLD1P80108 840 aa12.56□□□□□ -0.4
TRIM35-201ENST00000305364 PTGES3Q15185 160 aaKnown RBP12.56□□□□□ -0.4
TRIM35-201ENST00000305364 BAK1Q16611 211 aa12.56□□□□□ -0.4
TRIM35-201ENST00000305364 PLAG1Q6DJT9 500 aa12.56□□□□□ -0.4
TRIM35-201ENST00000305364 BHLHB9Q6PI77 547 aa12.56□□□□□ -0.4
TRIM35-201ENST00000305364 KIAA1958Q8N8K9 716 aa12.56□□□□□ -0.4
TRIM35-201ENST00000305364 OTUB1Q96FW1 271 aaPredicted RBP12.56□□□□□ -0.4
TRIM35-201ENST00000305364 TMEM169Q96HH4 297 aa12.56□□□□□ -0.4
TRIM35-201ENST00000305364 CCSER2Q9H7U1 834 aa12.56□□□□□ -0.4
TRIM35-201ENST00000305364 CACYBPQ9HB71 228 aaKnown RBP12.56□□□□□ -0.4
TRIM35-201ENST00000305364 STARD7Q9NQZ5 370 aa12.56□□□□□ -0.4
TRIM35-201ENST00000305364 STUB1Q9UNE7 303 aa12.56□□□□□ -0.4
TRIM35-201ENST00000305364 KIAA0100Q14667 2235 aaKnown RBP12.56□□□□□ -0.4
TRIM35-201ENST00000305364 TRBC2A0A5B9 178 aa12.56□□□□□ -0.4
TRIM35-201ENST00000305364 OR7A10O76100 309 aa12.56□□□□□ -0.4
TRIM35-201ENST00000305364 LAMP1P11279 417 aa12.56□□□□□ -0.4
TRIM35-201ENST00000305364 CHRNEQ04844 493 aa12.56□□□□□ -0.4
TRIM35-201ENST00000305364 PLCZ1Q86YW0 608 aa12.56□□□□□ -0.4
TRIM35-201ENST00000305364 IQCF2Q8IXL9 164 aa12.56□□□□□ -0.4
TRIM35-201ENST00000305364 C1orf52Q8N6N3 182 aaKnown RBP12.56□□□□□ -0.4
TRIM35-201ENST00000305364 RIPOR3Q96MK2 946 aa12.56□□□□□ -0.4
TRIM35-201ENST00000305364 FBXO10Q9UK96 956 aa12.56□□□□□ -0.4
TRIM35-201ENST00000305364 ACSL4O60488 711 aa12.56□□□□□ -0.4
TRIM35-201ENST00000305364 HOXC13P31276 330 aa12.56□□□□□ -0.4
TRIM35-201ENST00000305364 GRK5P34947 590 aa12.56□□□□□ -0.4
TRIM35-201ENST00000305364 XKP51811 444 aa12.56□□□□□ -0.4
TRIM35-201ENST00000305364 TARDBPQ13148 414 aaKnown RBP eCLIP12.56□□□□□ -0.4
TRIM35-201ENST00000305364 HEPACAMQ14CZ8 416 aa12.56□□□□□ -0.4
TRIM35-201ENST00000305364 SF1Q15637 639 aaKnown RBP12.56□□□□□ -0.4
TRIM35-201ENST00000305364 GPR19Q15760 415 aa12.56□□□□□ -0.4
TRIM35-201ENST00000305364 RNF175Q8N4F7 328 aa12.56□□□□□ -0.4
TRIM35-201ENST00000305364 DTX3Q8N9I9 347 aa12.56□□□□□ -0.4
TRIM35-201ENST00000305364 PPCDCQ96CD2 204 aa12.56□□□□□ -0.4
TRIM35-201ENST00000305364 ST6GAL2Q96JF0 529 aa12.56□□□□□ -0.4
TRIM35-201ENST00000305364 EPYCQ99645 322 aa12.56□□□□□ -0.4
TRIM35-201ENST00000305364 C3orf14Q9HBI5 128 aa12.56□□□□□ -0.4
TRIM35-201ENST00000305364 PCDHB11Q9Y5F2 797 aa12.56□□□□□ -0.4
TRIM35-201ENST00000305364 SCO2O43819 266 aa12.55□□□□□ -0.4
TRIM35-201ENST00000305364 CLDN11O75508 207 aa12.55□□□□□ -0.4
TRIM35-201ENST00000305364 CNMDO75829 334 aa12.55□□□□□ -0.4
TRIM35-201ENST00000305364 ASMTP46597 345 aa12.55□□□□□ -0.4
TRIM35-201ENST00000305364 ZFP36L2P47974 494 aaKnown RBP12.55□□□□□ -0.4
TRIM35-201ENST00000305364 TGM4P49221 684 aa12.55□□□□□ -0.4
TRIM35-201ENST00000305364 CRISP1P54107 249 aa12.55□□□□□ -0.4
TRIM35-201ENST00000305364 GALK2Q01415 458 aa12.55□□□□□ -0.4
TRIM35-201ENST00000305364 NAE1Q13564 534 aa12.55□□□□□ -0.4
TRIM35-201ENST00000305364 UPP1Q16831 310 aa12.55□□□□□ -0.4
TRIM35-201ENST00000305364 UGT8Q16880 541 aa12.55□□□□□ -0.4
TRIM35-201ENST00000305364 GDPD1Q8N9F7 314 aa12.55□□□□□ -0.4
TRIM35-201ENST00000305364 ART5Q96L15 291 aa12.55□□□□□ -0.4
TRIM35-201ENST00000305364 SLC35A5Q9BS91 424 aa12.55□□□□□ -0.4
TRIM35-201ENST00000305364 NLNQ9BYT8 704 aa12.55□□□□□ -0.4
TRIM35-201ENST00000305364 SIRT5Q9NXA8 310 aa12.55□□□□□ -0.4
TRIM35-201ENST00000305364 QPCTLQ9NXS2 382 aa12.55□□□□□ -0.4
TRIM35-201ENST00000305364 TRAV6A0A075B6T7 132 aa12.55□□□□□ -0.4
TRIM35-201ENST00000305364 KCNK5O95279 499 aa12.55□□□□□ -0.4
TRIM35-201ENST00000305364 SNAI1O95863 264 aaPredicted RBP12.55□□□□□ -0.4
TRIM35-201ENST00000305364 GBAP04062 536 aa12.55□□□□□ -0.4
TRIM35-201ENST00000305364 CRISP3P54108 245 aa12.55□□□□□ -0.4
TRIM35-201ENST00000305364 DCDC1P59894 354 aa12.55□□□□□ -0.4
TRIM35-201ENST00000305364 MANEALQ5VSG8 457 aa12.55□□□□□ -0.4
TRIM35-201ENST00000305364 NPAS3Q8IXF0 933 aa12.55□□□□□ -0.4
TRIM35-201ENST00000305364 NAGSQ8N159 534 aa12.55□□□□□ -0.4
TRIM35-201ENST00000305364 GEMIN6Q8WXD5 167 aaKnown RBP12.55□□□□□ -0.4
TRIM35-201ENST00000305364 C11orf24Q96F05 449 aaPredicted RBP12.55□□□□□ -0.4
TRIM35-201ENST00000305364 OR2A14Q96R47 310 aa12.55□□□□□ -0.4
TRIM35-201ENST00000305364 ZNF282Q9UDV7 671 aaPredicted RBP12.55□□□□□ -0.4
TRIM35-201ENST00000305364 DNMT3LQ9UJW3 386 aa12.55□□□□□ -0.4
TRIM35-201ENST00000305364 LSM7Q9UK45 103 aaKnown RBP12.55□□□□□ -0.4
TRIM35-201ENST00000305364 PDPK1O15530 556 aa12.55□□□□□ -0.4
TRIM35-201ENST00000305364 ETFAP13804 333 aa12.55□□□□□ -0.4
TRIM35-201ENST00000305364 MAN2A2P49641 1150 aa12.55□□□□□ -0.4
TRIM35-201ENST00000305364 CDK6Q00534 326 aa12.55□□□□□ -0.4
TRIM35-201ENST00000305364 ATAT1Q5SQI0 421 aa12.55□□□□□ -0.4
TRIM35-201ENST00000305364 HIST2H2AA3Q6FI13 130 aa12.55□□□□□ -0.4
TRIM35-201ENST00000305364 LAIR1Q6GTX8 287 aa12.55□□□□□ -0.4
TRIM35-201ENST00000305364 SBSNQ6UWP8 590 aa12.55□□□□□ -0.4
TRIM35-201ENST00000305364 GPR142Q7Z601 462 aa12.55□□□□□ -0.4
TRIM35-201ENST00000305364 NATD1Q8N6N6 113 aa12.55□□□□□ -0.4
TRIM35-201ENST00000305364 GANCQ8TET4 914 aa12.55□□□□□ -0.4
TRIM35-201ENST00000305364 NIPSNAP1Q9BPW8 284 aa12.55□□□□□ -0.4
TRIM35-201ENST00000305364 TSSK6Q9BXA6 273 aa12.55□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms