RNA–Protein interactions for RNA: ENST00000302528.11

CLIP1-201, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

APPRIS P4 TSL 5 BASIC

Gene CLIP1, Length 5,833 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-201ENST00000302528 TLE3Q04726 772 aa10.06□□□□□ -0.8
CLIP1-201ENST00000302528 PTGR1Q14914 329 aa10.06□□□□□ -0.8
CLIP1-201ENST00000302528 GRIK5Q16478 980 aa10.06□□□□□ -0.8
CLIP1-201ENST00000302528 OR4F3Q6IEY1 312 aa10.06□□□□□ -0.8
CLIP1-201ENST00000302528 LRRC55Q6ZSA7 311 aa10.06□□□□□ -0.8
CLIP1-201ENST00000302528 RELL1Q8IUW5 271 aa10.06□□□□□ -0.8
CLIP1-201ENST00000302528 C1orf52Q8N6N3 182 aaKnown RBP10.06□□□□□ -0.8
CLIP1-201ENST00000302528 WDSUB1Q8N9V3 476 aa10.06□□□□□ -0.8
CLIP1-201ENST00000302528 AVL9Q8NBF6 648 aa10.06□□□□□ -0.8
CLIP1-201ENST00000302528 NLGN2Q8NFZ4 835 aa10.06□□□□□ -0.8
CLIP1-201ENST00000302528 TMBIM1Q969X1 311 aa10.06□□□□□ -0.8
CLIP1-201ENST00000302528 TAC3Q9UHF0 121 aa10.06□□□□□ -0.8
CLIP1-201ENST00000302528 ANKRD33BA6NCL7 494 aa10.06□□□□□ -0.8
CLIP1-201ENST00000302528 INMT-MINDY4F8WBC2 141 aa10.06□□□□□ -0.8
CLIP1-201ENST00000302528 SLC22A2O15244 555 aa10.06□□□□□ -0.8
CLIP1-201ENST00000302528 TAC4Q86UU9 113 aa10.06□□□□□ -0.8
CLIP1-201ENST00000302528 ZC3HC1Q86WB0 502 aaKnown RBP10.06□□□□□ -0.8
CLIP1-201ENST00000302528 OR56A1Q8NGH5 318 aa10.06□□□□□ -0.8
CLIP1-201ENST00000302528 C22orf15Q8WYQ4 148 aa10.06□□□□□ -0.8
CLIP1-201ENST00000302528 KCNJ9Q92806 393 aa10.06□□□□□ -0.8
CLIP1-201ENST00000302528 URM1Q9BTM9 101 aaKnown RBP10.06□□□□□ -0.8
CLIP1-201ENST00000302528 LCHNA4D1U4 455 aa10.06□□□□□ -0.8
CLIP1-201ENST00000302528 NEMP2A6NFY4 417 aa10.06□□□□□ -0.8
CLIP1-201ENST00000302528 SPATA31C2B4DYI2 1134 aa10.06□□□□□ -0.8
CLIP1-201ENST00000302528 HAS3O00219 553 aa10.06□□□□□ -0.8
CLIP1-201ENST00000302528 ATG12O94817 140 aa10.06□□□□□ -0.8
CLIP1-201ENST00000302528 SOX14O95416 240 aa10.06□□□□□ -0.8
CLIP1-201ENST00000302528 MT-ND2P03891 347 aa10.06□□□□□ -0.8
CLIP1-201ENST00000302528 IL3P08700 152 aa10.06□□□□□ -0.8
CLIP1-201ENST00000302528 CAPN3P20807 821 aa10.06□□□□□ -0.8
CLIP1-201ENST00000302528 RPL10P27635 214 aaKnown RBP10.06□□□□□ -0.8
CLIP1-201ENST00000302528 CAMLGP49069 296 aa10.06□□□□□ -0.8
CLIP1-201ENST00000302528 IDH3GP51553 393 aaPredicted RBP10.06□□□□□ -0.8
CLIP1-201ENST00000302528 ZNF136P52737 540 aa10.06□□□□□ -0.8
CLIP1-201ENST00000302528 RPS3AP61247 264 aaKnown RBP10.06□□□□□ -0.8
CLIP1-201ENST00000302528 PSPHP78330 225 aa10.06□□□□□ -0.8
CLIP1-201ENST00000302528 CDNFQ49AH0 187 aa10.06□□□□□ -0.8
CLIP1-201ENST00000302528 MFSD5Q6N075 450 aa10.06□□□□□ -0.8
CLIP1-201ENST00000302528 CEACAM20Q6UY09 585 aa10.06□□□□□ -0.8
CLIP1-201ENST00000302528 VASH1Q7L8A9 365 aaPredicted RBP10.06□□□□□ -0.8
CLIP1-201ENST00000302528 SH3YL1Q96HL8 342 aaPredicted RBP10.06□□□□□ -0.8
CLIP1-201ENST00000302528 WDR18Q9BV38 432 aa10.06□□□□□ -0.8
CLIP1-201ENST00000302528 CADM1Q9BY67 442 aaKnown RBP10.06□□□□□ -0.8
CLIP1-201ENST00000302528 NLGN3Q9NZ94 848 aa10.06□□□□□ -0.8
CLIP1-201ENST00000302528 IL36AQ9UHA7 158 aa10.06□□□□□ -0.8
CLIP1-201ENST00000302528 OAZ3Q9UMX2 235 aa10.06□□□□□ -0.8
CLIP1-201ENST00000302528 CILPO75339 1184 aa10.06□□□□□ -0.8
CLIP1-201ENST00000302528 FHP07954 510 aa10.06□□□□□ -0.8
CLIP1-201ENST00000302528 MMP8P22894 467 aa10.06□□□□□ -0.8
CLIP1-201ENST00000302528 AKR1C2P52895 323 aa10.06□□□□□ -0.8
CLIP1-201ENST00000302528 PMS2P3Q13401 168 aa10.06□□□□□ -0.8
CLIP1-201ENST00000302528 GAS6Q14393 721 aa10.06□□□□□ -0.8
CLIP1-201ENST00000302528 ARL5BQ96KC2 179 aa10.06□□□□□ -0.8
CLIP1-201ENST00000302528 TMEM209Q96SK2 561 aa10.06□□□□□ -0.8
CLIP1-201ENST00000302528 SULT4A1Q9BR01 284 aa10.06□□□□□ -0.8
CLIP1-201ENST00000302528 FBRSQ9HAH7 460 aa10.06□□□□□ -0.8
CLIP1-201ENST00000302528 SIGLEC1Q9BZZ2 1709 aa10.06□□□□□ -0.8
CLIP1-201ENST00000302528 NWD1Q149M9 1564 aa10.06□□□□□ -0.8
CLIP1-201ENST00000302528 RCCD1A6NED2 376 aa10.06□□□□□ -0.8
CLIP1-201ENST00000302528 POLR1CO15160 346 aaPredicted RBP10.06□□□□□ -0.8
CLIP1-201ENST00000302528 PLATP00750 562 aa10.06□□□□□ -0.8
CLIP1-201ENST00000302528 CSF2P04141 144 aa10.06□□□□□ -0.8
CLIP1-201ENST00000302528 JMJD7P0C870 316 aa10.06□□□□□ -0.8
CLIP1-201ENST00000302528 CLCNKAP51800 687 aa10.06□□□□□ -0.8
CLIP1-201ENST00000302528 SNU13P55769 128 aaKnown RBP10.06□□□□□ -0.8
CLIP1-201ENST00000302528 GHRHRQ02643 423 aa10.06□□□□□ -0.8
CLIP1-201ENST00000302528 GSTM4Q03013 218 aa10.06□□□□□ -0.8
CLIP1-201ENST00000302528 HNRNPDQ14103 355 aaKnown RBP10.06□□□□□ -0.8
CLIP1-201ENST00000302528 DHCR24Q15392 516 aa10.06□□□□□ -0.8
CLIP1-201ENST00000302528 DPYSL2Q16555 572 aa10.06□□□□□ -0.8
CLIP1-201ENST00000302528 DUOXA1Q1HG43 343 aa10.06□□□□□ -0.8
CLIP1-201ENST00000302528 ZBED5Q49AG3 693 aa10.06□□□□□ -0.8
CLIP1-201ENST00000302528 SLC35F1Q5T1Q4 408 aa10.06□□□□□ -0.8
CLIP1-201ENST00000302528 RGMBQ6NW40 437 aa10.06□□□□□ -0.8
CLIP1-201ENST00000302528 Q8N9G6 341 aaPredicted RBP10.06□□□□□ -0.8
CLIP1-201ENST00000302528 OR14A2Q96R54 314 aa10.06□□□□□ -0.8
CLIP1-201ENST00000302528 TUBA1CQ9BQE3 449 aa10.06□□□□□ -0.8
CLIP1-201ENST00000302528 HIF1ANQ9NWT6 349 aa10.06□□□□□ -0.8
CLIP1-201ENST00000302528 KCNIP1Q9NZI2 227 aa10.06□□□□□ -0.8
CLIP1-201ENST00000302528 LRFN1Q9P244 771 aa10.06□□□□□ -0.8
CLIP1-201ENST00000302528 SERTAD3Q9UJW9 196 aa10.06□□□□□ -0.8
CLIP1-201ENST00000302528 COL1A2P08123 1366 aa10.05□□□□□ -0.8
CLIP1-201ENST00000302528 LOC100130705A0A1B0GUX0 176 aa10.05□□□□□ -0.8
CLIP1-201ENST00000302528 GABRDO14764 452 aa10.05□□□□□ -0.8
CLIP1-201ENST00000302528 SYN3O14994 580 aa10.05□□□□□ -0.8
CLIP1-201ENST00000302528 ANKRD28O15084 1053 aa10.05□□□□□ -0.8
CLIP1-201ENST00000302528 APOC3P02656 99 aa10.05□□□□□ -0.8
CLIP1-201ENST00000302528 HEXBP07686 556 aa10.05□□□□□ -0.8
CLIP1-201ENST00000302528 LEPRP48357 1165 aaKnown RBP10.05□□□□□ -0.8
CLIP1-201ENST00000302528 ALDH3B2P48448 385 aa10.05□□□□□ -0.8
CLIP1-201ENST00000302528 TAS2R39P59534 338 aa10.05□□□□□ -0.8
CLIP1-201ENST00000302528 NOGQ13253 232 aa10.05□□□□□ -0.8
CLIP1-201ENST00000302528 BORAQ6PGQ7 559 aa10.05□□□□□ -0.8
CLIP1-201ENST00000302528 NAPRTQ6XQN6 538 aa10.05□□□□□ -0.8
CLIP1-201ENST00000302528 TRAPPC6BQ86SZ2 158 aa10.05□□□□□ -0.8
CLIP1-201ENST00000302528 LRRTM4Q86VH4 590 aa10.05□□□□□ -0.8
CLIP1-201ENST00000302528 TMEM126BQ8IUX1 230 aa10.05□□□□□ -0.8
CLIP1-201ENST00000302528 PM20D2Q8IYS1 436 aa10.05□□□□□ -0.8
CLIP1-201ENST00000302528 METTL25Q8N6Q8 603 aa10.05□□□□□ -0.8
CLIP1-201ENST00000302528 PPTC7Q8NI37 304 aa10.05□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms