RNA–Protein interactions for RNA: ENST00000298396.6

SSX3-201, Transcript of SSX family member 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSX3, Length 1,232 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSX3-201ENST00000298396 GABREP78334 506 aa5.62□□□□□ -1.51
SSX3-201ENST00000298396 SHC2P98077 582 aa5.62□□□□□ -1.51
SSX3-201ENST00000298396 RELAQ04206 551 aa5.62□□□□□ -1.51
SSX3-201ENST00000298396 CLCQ05315 142 aa5.62□□□□□ -1.51
SSX3-201ENST00000298396 CHIT1Q13231 466 aa5.62□□□□□ -1.51
SSX3-201ENST00000298396 TUBB3Q13509 450 aa5.62□□□□□ -1.51
SSX3-201ENST00000298396 SLBPQ14493 270 aaKnown RBP eCLIP5.62□□□□□ -1.51
SSX3-201ENST00000298396 RTP5Q14D33 572 aa5.62□□□□□ -1.51
SSX3-201ENST00000298396 HKDC1Q2TB90 917 aa5.62□□□□□ -1.51
SSX3-201ENST00000298396 XKR6Q5GH73 641 aa5.62□□□□□ -1.51
SSX3-201ENST00000298396 TCHHL1Q5QJ38 904 aaPredicted RBP5.62□□□□□ -1.51
SSX3-201ENST00000298396 GRHL2Q6ISB3 625 aa5.62□□□□□ -1.51
SSX3-201ENST00000298396 LCN10Q6JVE6 187 aa5.62□□□□□ -1.51
SSX3-201ENST00000298396 METTL2BQ6P1Q9 378 aaKnown RBP5.62□□□□□ -1.51
SSX3-201ENST00000298396 SEZ6L2Q6UXD5 910 aa5.62□□□□□ -1.51
SSX3-201ENST00000298396 PRSS41Q7RTY9 318 aa5.62□□□□□ -1.51
SSX3-201ENST00000298396 SLC22A9Q8IVM8 553 aa5.62□□□□□ -1.51
SSX3-201ENST00000298396 MCATQ8IVS2 390 aaKnown RBP5.62□□□□□ -1.51
SSX3-201ENST00000298396 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP5.62□□□□□ -1.51
SSX3-201ENST00000298396 LAS2Q8IYD9 372 aa5.62□□□□□ -1.51
SSX3-201ENST00000298396 GALNT15Q8N3T1 639 aa5.62□□□□□ -1.51
SSX3-201ENST00000298396 ANKRD42Q8N9B4 389 aa5.62□□□□□ -1.51
SSX3-201ENST00000298396 MFSD9Q8NBP5 474 aa5.62□□□□□ -1.51
SSX3-201ENST00000298396 OR4F6Q8NGB9 312 aa5.62□□□□□ -1.51
SSX3-201ENST00000298396 WDR36Q8NI36 951 aaKnown RBP5.62□□□□□ -1.51
SSX3-201ENST00000298396 WDR20Q8TBZ3 569 aa5.62□□□□□ -1.51
SSX3-201ENST00000298396 MGARPQ8TDB4 240 aa5.62□□□□□ -1.51
SSX3-201ENST00000298396 TRPC4APQ8TEL6 797 aa5.62□□□□□ -1.51
SSX3-201ENST00000298396 CREB3L4Q8TEY5 395 aa5.62□□□□□ -1.51
SSX3-201ENST00000298396 AGAP11Q8TF27 550 aa5.62□□□□□ -1.51
SSX3-201ENST00000298396 GATA6Q92908 595 aa5.62□□□□□ -1.51
SSX3-201ENST00000298396 USP7Q93009 1102 aa5.62□□□□□ -1.51
SSX3-201ENST00000298396 PLPPR2Q96GM1 343 aa5.62□□□□□ -1.51
SSX3-201ENST00000298396 TCTN2Q96GX1 697 aa5.62□□□□□ -1.51
SSX3-201ENST00000298396 SLC46A1Q96NT5 459 aa5.62□□□□□ -1.51
SSX3-201ENST00000298396 OR6C1Q96RD1 312 aa5.62□□□□□ -1.51
SSX3-201ENST00000298396 KCNA7Q96RP8 456 aa5.62□□□□□ -1.51
SSX3-201ENST00000298396 SORT1Q99523 831 aa5.62□□□□□ -1.51
SSX3-201ENST00000298396 ZFYVE21Q9BQ24 234 aa5.62□□□□□ -1.51
SSX3-201ENST00000298396 NTMT1Q9BV86 223 aa5.62□□□□□ -1.51
SSX3-201ENST00000298396 SHCBP1LQ9BZQ2 653 aa5.62□□□□□ -1.51
SSX3-201ENST00000298396 STRADBQ9C0K7 418 aa5.62□□□□□ -1.51
SSX3-201ENST00000298396 EHD1Q9H4M9 534 aa5.62□□□□□ -1.51
SSX3-201ENST00000298396 KLHL31Q9H511 634 aa5.62□□□□□ -1.51
SSX3-201ENST00000298396 IPPKQ9H8X2 491 aa5.62□□□□□ -1.51
SSX3-201ENST00000298396 AKIRIN1Q9H9L7 192 aaPredicted RBP5.62□□□□□ -1.51
SSX3-201ENST00000298396 POLR1BQ9H9Y6 1135 aa5.62□□□□□ -1.51
SSX3-201ENST00000298396 PDE7BQ9NP56 450 aa5.62□□□□□ -1.51
SSX3-201ENST00000298396 KCNK9Q9NPC2 374 aa5.62□□□□□ -1.51
SSX3-201ENST00000298396 FBXO8Q9NRD0 319 aa5.62□□□□□ -1.51
SSX3-201ENST00000298396 FGF21Q9NSA1 209 aa5.62□□□□□ -1.51
SSX3-201ENST00000298396 SLC39A1Q9NY26 324 aa5.62□□□□□ -1.51
SSX3-201ENST00000298396 SNX7Q9UNH6 387 aa5.62□□□□□ -1.51
SSX3-201ENST00000298396 MSRB2Q9Y3D2 182 aa5.62□□□□□ -1.51
SSX3-201ENST00000298396 NEUROG3Q9Y4Z2 214 aa5.62□□□□□ -1.51
SSX3-201ENST00000298396 TMEM184BQ9Y519 407 aaPredicted RBP5.62□□□□□ -1.51
SSX3-201ENST00000298396 TNPO3Q9Y5L0 923 aaKnown RBP5.62□□□□□ -1.51
SSX3-201ENST00000298396 KCNE2Q9Y6J6 123 aa5.62□□□□□ -1.51
SSX3-201ENST00000298396 TNRC6AQ8NDV7 1962 aaKnown RBP5.62□□□□□ -1.51
SSX3-201ENST00000298396 EPG5Q9HCE0 2579 aa5.61□□□□□ -1.51
SSX3-201ENST00000298396 WDR91A4D1P6 747 aa5.61□□□□□ -1.51
SSX3-201ENST00000298396 PABPN1LA6NDY0 278 aaKnown RBP5.61□□□□□ -1.51
SSX3-201ENST00000298396 TRABD2BA6NFA1 517 aa5.61□□□□□ -1.51
SSX3-201ENST00000298396 GOLGA6L10A6NI86 522 aa5.61□□□□□ -1.51
SSX3-201ENST00000298396 HMGB1P1B2RPK0 211 aaPredicted RBP5.61□□□□□ -1.51
SSX3-201ENST00000298396 TMEM233B4DJY2 109 aa5.61□□□□□ -1.51
SSX3-201ENST00000298396 TMX2-CTNND1H3BSU7 103 aa5.61□□□□□ -1.51
SSX3-201ENST00000298396 CLGNO14967 610 aa5.61□□□□□ -1.51
SSX3-201ENST00000298396 BIRC5O15392 142 aa5.61□□□□□ -1.51
SSX3-201ENST00000298396 ATP8B1O43520 1251 aa5.61□□□□□ -1.51
SSX3-201ENST00000298396 FOXS1O43638 330 aa5.61□□□□□ -1.51
SSX3-201ENST00000298396 TLX3O43711 291 aaPredicted RBP5.61□□□□□ -1.51
SSX3-201ENST00000298396 OR1F1O43749 312 aa5.61□□□□□ -1.51
SSX3-201ENST00000298396 NPHS1O60500 1241 aa5.61□□□□□ -1.51
SSX3-201ENST00000298396 CNOT3O75175 753 aaKnown RBP5.61□□□□□ -1.51
SSX3-201ENST00000298396 DNAJB6O75190 326 aa5.61□□□□□ -1.51
SSX3-201ENST00000298396 SNNO75324 88 aaPredicted RBP5.61□□□□□ -1.51
SSX3-201ENST00000298396 KATNA1O75449 491 aa5.61□□□□□ -1.51
SSX3-201ENST00000298396 SUPT7LO94864 414 aa5.61□□□□□ -1.51
SSX3-201ENST00000298396 OR4F21O95013 312 aa5.61□□□□□ -1.51
SSX3-201ENST00000298396 TNFSF15O95150 251 aa5.61□□□□□ -1.51
SSX3-201ENST00000298396 ETHE1O95571 254 aa5.61□□□□□ -1.51
SSX3-201ENST00000298396 CHN1P15882 459 aa5.61□□□□□ -1.51
SSX3-201ENST00000298396 BGNP21810 368 aa5.61□□□□□ -1.51
SSX3-201ENST00000298396 HRH2P25021 359 aa5.61□□□□□ -1.51
SSX3-201ENST00000298396 SLC5A2P31639 672 aa5.61□□□□□ -1.51
SSX3-201ENST00000298396 HNRNPH1P31943 449 aaKnown RBP5.61□□□□□ -1.51
SSX3-201ENST00000298396 RORAP35398 523 aa5.61□□□□□ -1.51
SSX3-201ENST00000298396 CCNG1P51959 295 aa5.61□□□□□ -1.51
SSX3-201ENST00000298396 ITGA1P56199 1179 aa5.61□□□□□ -1.51
SSX3-201ENST00000298396 RPS15AP62244 130 aaKnown RBP5.61□□□□□ -1.51
SSX3-201ENST00000298396 CYP4F2P78329 520 aa5.61□□□□□ -1.51
SSX3-201ENST00000298396 IRF8Q02556 426 aa5.61□□□□□ -1.51
SSX3-201ENST00000298396 FOXM1Q08050 763 aa5.61□□□□□ -1.51
SSX3-201ENST00000298396 LCP2Q13094 533 aa5.61□□□□□ -1.51
SSX3-201ENST00000298396 GPS2Q13227 327 aa5.61□□□□□ -1.51
SSX3-201ENST00000298396 EIF3IQ13347 325 aaKnown RBP5.61□□□□□ -1.51
SSX3-201ENST00000298396 CHI3L2Q15782 390 aa5.61□□□□□ -1.51
SSX3-201ENST00000298396 RBBP7Q16576 425 aa5.61□□□□□ -1.51
SSX3-201ENST00000298396 GGTA1PQ4G0N0 100 aa5.61□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 53.4 ms