RNA–Protein interactions for RNA: ENST00000297071.8

TRA2A-201, Transcript of transformer 2 alpha homolog, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TRA2A, Length 1,845 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2A-201ENST00000297071 TRIM63Q969Q1 353 aa18.42■□□□□ 0.54
TRA2A-201ENST00000297071 TRAF4Q9BUZ4 470 aaPredicted RBP18.42■□□□□ 0.54
TRA2A-201ENST00000297071 C2orf49Q9BVC5 232 aaPredicted RBP18.42■□□□□ 0.54
TRA2A-201ENST00000297071 ASPNQ9BXN1 380 aa18.42■□□□□ 0.54
TRA2A-201ENST00000297071 ACER3Q9NUN7 267 aa18.42■□□□□ 0.54
TRA2A-201ENST00000297071 TRPM5Q9NZQ8 1165 aa18.42■□□□□ 0.54
TRA2A-201ENST00000297071 SLC22A14Q9Y267 594 aa18.42■□□□□ 0.54
TRA2A-201ENST00000297071 V9GYH0 126 aa18.42■□□□□ 0.54
TRA2A-201ENST00000297071 FAM25AB3EWG3 89 aa18.41■□□□□ 0.54
TRA2A-201ENST00000297071 FAM25CB3EWG5 89 aa18.41■□□□□ 0.54
TRA2A-201ENST00000297071 FAM25GB3EWG6 89 aa18.41■□□□□ 0.54
TRA2A-201ENST00000297071 CTDSP2O14595 271 aa18.41■□□□□ 0.54
TRA2A-201ENST00000297071 TBL1XO60907 577 aa18.41■□□□□ 0.54
TRA2A-201ENST00000297071 GPX5O75715 221 aa18.41■□□□□ 0.54
TRA2A-201ENST00000297071 NUDT7P0C024 238 aa18.41■□□□□ 0.54
TRA2A-201ENST00000297071 RAE1P78406 368 aaKnown RBP18.41■□□□□ 0.54
TRA2A-201ENST00000297071 B4GALNT1Q00973 533 aa18.41■□□□□ 0.54
TRA2A-201ENST00000297071 EEF1A2Q05639 463 aaKnown RBP18.41■□□□□ 0.54
TRA2A-201ENST00000297071 ZNF630Q2M218 657 aaPredicted RBP18.41■□□□□ 0.54
TRA2A-201ENST00000297071 SOWAHCQ53LP3 525 aaPredicted RBP18.41■□□□□ 0.54
TRA2A-201ENST00000297071 C9orf131Q5VYM1 1079 aa18.41■□□□□ 0.54
TRA2A-201ENST00000297071 TMPRSS11AQ6ZMR5 421 aa18.41■□□□□ 0.54
TRA2A-201ENST00000297071 NRARPQ7Z6K4 114 aa18.41■□□□□ 0.54
TRA2A-201ENST00000297071 NAGSQ8N159 534 aa18.41■□□□□ 0.54
TRA2A-201ENST00000297071 GPR26Q8NDV2 337 aa18.41■□□□□ 0.54
TRA2A-201ENST00000297071 FAM46DQ8NEK8 389 aa18.41■□□□□ 0.54
TRA2A-201ENST00000297071 OPALINQ96PE5 141 aa18.41■□□□□ 0.54
TRA2A-201ENST00000297071 SRRQ9GZT4 340 aa18.41■□□□□ 0.54
TRA2A-201ENST00000297071 AMBNQ9NP70 447 aa18.41■□□□□ 0.54
TRA2A-201ENST00000297071 OBSL1O75147 1896 aa18.4■□□□□ 0.54
TRA2A-201ENST00000297071 ZNF670-ZNF695F2Z2N8 137 aa18.4■□□□□ 0.54
TRA2A-201ENST00000297071 CACNB4O00305 520 aaPredicted RBP18.4■□□□□ 0.54
TRA2A-201ENST00000297071 TRIM3O75382 744 aaPredicted RBP18.4■□□□□ 0.54
TRA2A-201ENST00000297071 IGSF6O95976 241 aa18.4■□□□□ 0.54
TRA2A-201ENST00000297071 ASGR1P07306 291 aa18.4■□□□□ 0.54
TRA2A-201ENST00000297071 RHCEP18577 417 aa18.4■□□□□ 0.54
TRA2A-201ENST00000297071 RFX2P48378 723 aa18.4■□□□□ 0.54
TRA2A-201ENST00000297071 CRISP1P54107 249 aa18.4■□□□□ 0.54
TRA2A-201ENST00000297071 CDH12P55289 794 aa18.4■□□□□ 0.54
TRA2A-201ENST00000297071 PSPHP78330 225 aa18.4■□□□□ 0.54
TRA2A-201ENST00000297071 CAMK2BQ13554 666 aa18.4■□□□□ 0.54
TRA2A-201ENST00000297071 PTGES3Q15185 160 aaKnown RBP18.4■□□□□ 0.54
TRA2A-201ENST00000297071 FRMPD2BQ6IN97 320 aa18.4■□□□□ 0.54
TRA2A-201ENST00000297071 VASH1Q7L8A9 365 aaPredicted RBP18.4■□□□□ 0.54
TRA2A-201ENST00000297071 FAM217AQ8IXS0 508 aa18.4■□□□□ 0.54
TRA2A-201ENST00000297071 OXR1Q8N573 874 aa18.4■□□□□ 0.54
TRA2A-201ENST00000297071 UTP15Q8TED0 518 aaKnown RBP18.4■□□□□ 0.54
TRA2A-201ENST00000297071 ASB15Q8WXK1 588 aa18.4■□□□□ 0.54
TRA2A-201ENST00000297071 TRMT2BQ96GJ1 504 aaKnown RBP18.4■□□□□ 0.54
TRA2A-201ENST00000297071 OR5M11Q96RB7 305 aa18.4■□□□□ 0.54
TRA2A-201ENST00000297071 PHOX2BQ99453 314 aa18.4■□□□□ 0.54
TRA2A-201ENST00000297071 TMEM175Q9BSA9 504 aa18.4■□□□□ 0.54
TRA2A-201ENST00000297071 HHATLQ9HCP6 504 aa18.4■□□□□ 0.54
TRA2A-201ENST00000297071 RLIMQ9NVW2 624 aa18.4■□□□□ 0.54
TRA2A-201ENST00000297071 ENPP4Q9Y6X5 453 aa18.4■□□□□ 0.54
TRA2A-201ENST00000297071 DNTTP04053 509 aa18.39■□□□□ 0.54
TRA2A-201ENST00000297071 YES1P07947 543 aa18.39■□□□□ 0.54
TRA2A-201ENST00000297071 HMGA1P17096 107 aaKnown RBP18.39■□□□□ 0.54
TRA2A-201ENST00000297071 SERPINA4P29622 427 aa18.39■□□□□ 0.54
TRA2A-201ENST00000297071 CSKP41240 450 aa18.39■□□□□ 0.54
TRA2A-201ENST00000297071 SCN1BQ07699 218 aa18.39■□□□□ 0.54
TRA2A-201ENST00000297071 GAB1Q13480 694 aa18.39■□□□□ 0.54
TRA2A-201ENST00000297071 MED22Q15528 200 aa18.39■□□□□ 0.54
TRA2A-201ENST00000297071 ARMC4Q5T2S8 1044 aa18.39■□□□□ 0.54
TRA2A-201ENST00000297071 CCSAPQ6IQ19 270 aaPredicted RBP18.39■□□□□ 0.54
TRA2A-201ENST00000297071 SLC8B1Q6J4K2 584 aa18.39■□□□□ 0.54
TRA2A-201ENST00000297071 OR8H2Q8N162 312 aa18.39■□□□□ 0.54
TRA2A-201ENST00000297071 CLP1Q92989 425 aaKnown RBP18.39■□□□□ 0.54
TRA2A-201ENST00000297071 RIPOR3Q96MK2 946 aa18.39■□□□□ 0.54
TRA2A-201ENST00000297071 FAM83CQ9BQN1 747 aa18.39■□□□□ 0.54
TRA2A-201ENST00000297071 SLC22A4Q9H015 551 aa18.39■□□□□ 0.54
TRA2A-201ENST00000297071 GKN1Q9NS71 199 aa18.39■□□□□ 0.54
TRA2A-201ENST00000297071 KCND3Q9UK17 655 aa18.39■□□□□ 0.54
TRA2A-201ENST00000297071 STUB1Q9UNE7 303 aa18.39■□□□□ 0.54
TRA2A-201ENST00000297071 PLXNA2O75051 1894 aa18.39■□□□□ 0.54
TRA2A-201ENST00000297071 PCM1Q15154 2024 aa18.39■□□□□ 0.53
TRA2A-201ENST00000297071 SEPT4O43236 478 aa18.39■□□□□ 0.53
TRA2A-201ENST00000297071 AP2A2O94973 939 aa18.39■□□□□ 0.53
TRA2A-201ENST00000297071 PCBP3P57721 371 aaKnown RBP18.39■□□□□ 0.53
TRA2A-201ENST00000297071 SCARB2Q14108 478 aa18.39■□□□□ 0.53
TRA2A-201ENST00000297071 MFSD14CQ5VZR4 134 aa18.39■□□□□ 0.53
TRA2A-201ENST00000297071 TRAF7Q6Q0C0 670 aa18.39■□□□□ 0.53
TRA2A-201ENST00000297071 CRTC1Q6UUV9 634 aa18.39■□□□□ 0.53
TRA2A-201ENST00000297071 PTCHD4Q6ZW05 846 aa18.39■□□□□ 0.53
TRA2A-201ENST00000297071 GALNT12Q8IXK2 581 aa18.39■□□□□ 0.53
TRA2A-201ENST00000297071 RDH10Q8IZV5 341 aa18.39■□□□□ 0.53
TRA2A-201ENST00000297071 GDPD1Q8N9F7 314 aa18.39■□□□□ 0.53
TRA2A-201ENST00000297071 BTN2A2Q8WVV5 523 aa18.39■□□□□ 0.53
TRA2A-201ENST00000297071 SCRN2Q96FV2 425 aa18.39■□□□□ 0.53
TRA2A-201ENST00000297071 RNF170Q96K19 258 aa18.39■□□□□ 0.53
TRA2A-201ENST00000297071 MSLNLQ96KJ4 702 aa18.39■□□□□ 0.53
TRA2A-201ENST00000297071 DEPDC7Q96QD5 511 aa18.39■□□□□ 0.53
TRA2A-201ENST00000297071 P2RY13Q9BPV8 354 aa18.39■□□□□ 0.53
TRA2A-201ENST00000297071 TSEN34Q9BSV6 310 aaKnown RBP18.39■□□□□ 0.53
TRA2A-201ENST00000297071 MCOLN1Q9GZU1 580 aa18.39■□□□□ 0.53
TRA2A-201ENST00000297071 MIR1-1HGQ9H1L0 117 aa18.39■□□□□ 0.53
TRA2A-201ENST00000297071 C1GALT1Q9NS00 363 aa18.39■□□□□ 0.53
TRA2A-201ENST00000297071 DDX28Q9NUL7 540 aaKnown RBP18.39■□□□□ 0.53
TRA2A-201ENST00000297071 ERVK13-1Q9NX77 482 aa18.39■□□□□ 0.53
TRA2A-201ENST00000297071 SH3BP4Q9P0V3 963 aa18.39■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms