RNA–Protein interactions for RNA: ENST00000296978.3

TMEM200A-201, Transcript of transmembrane protein 200A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TMEM200A, Length 3,512 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM200A-201ENST00000296978 HOXA9P31269 272 aa12.11□□□□□ -0.47
TMEM200A-201ENST00000296978 GSTM5P46439 218 aa12.11□□□□□ -0.47
TMEM200A-201ENST00000296978 RACK1P63244 317 aaKnown RBP12.11□□□□□ -0.47
TMEM200A-201ENST00000296978 NKX3-2P78367 333 aa12.11□□□□□ -0.47
TMEM200A-201ENST00000296978 USP30Q70CQ3 517 aa12.11□□□□□ -0.47
TMEM200A-201ENST00000296978 TRIB2Q92519 343 aa12.11□□□□□ -0.47
TMEM200A-201ENST00000296978 PHF21AQ96BD5 680 aa12.11□□□□□ -0.47
TMEM200A-201ENST00000296978 EFHD2Q96C19 240 aaPredicted RBP12.11□□□□□ -0.47
TMEM200A-201ENST00000296978 TMCO6Q96DC7 493 aa12.11□□□□□ -0.47
TMEM200A-201ENST00000296978 CFAP97Q9P2B7 532 aa12.11□□□□□ -0.47
TMEM200A-201ENST00000296978 PSORS1C1Q9UIG5 152 aa12.11□□□□□ -0.47
TMEM200A-201ENST00000296978 CARD8Q9Y2G2 431 aa12.11□□□□□ -0.47
TMEM200A-201ENST00000296978 SLC45A1Q9Y2W3 748 aa12.11□□□□□ -0.47
TMEM200A-201ENST00000296978 SLITRK5O94991 958 aa12.11□□□□□ -0.47
TMEM200A-201ENST00000296978 PPIBP23284 216 aaKnown RBP12.11□□□□□ -0.47
TMEM200A-201ENST00000296978 MRPL28Q13084 256 aaKnown RBP12.11□□□□□ -0.47
TMEM200A-201ENST00000296978 RGNQ15493 299 aa12.11□□□□□ -0.47
TMEM200A-201ENST00000296978 CXorf57Q6NSI4 855 aaKnown RBP12.11□□□□□ -0.47
TMEM200A-201ENST00000296978 AGTRAPQ6RW13 159 aa12.11□□□□□ -0.47
TMEM200A-201ENST00000296978 KLHL17Q6TDP4 642 aa12.11□□□□□ -0.47
TMEM200A-201ENST00000296978 TCEANCQ8N8B7 351 aa12.11□□□□□ -0.47
TMEM200A-201ENST00000296978 ASCC1Q8N9N2 400 aaKnown RBP12.11□□□□□ -0.47
TMEM200A-201ENST00000296978 MRPS31Q92665 395 aaKnown RBP12.11□□□□□ -0.47
TMEM200A-201ENST00000296978 RAB8BQ92930 207 aa12.11□□□□□ -0.47
TMEM200A-201ENST00000296978 TMEM169Q96HH4 297 aa12.11□□□□□ -0.47
TMEM200A-201ENST00000296978 CTRCQ99895 268 aa12.11□□□□□ -0.47
TMEM200A-201ENST00000296978 PSD2Q9BQI7 771 aa12.11□□□□□ -0.47
TMEM200A-201ENST00000296978 CDADC1Q9BWV3 514 aa12.11□□□□□ -0.47
TMEM200A-201ENST00000296978 NLNQ9BYT8 704 aa12.11□□□□□ -0.47
TMEM200A-201ENST00000296978 ABCB8Q9NUT2 735 aa12.11□□□□□ -0.47
TMEM200A-201ENST00000296978 CORO2BQ9UQ03 480 aa12.11□□□□□ -0.47
TMEM200A-201ENST00000296978 C5orf42Q9H799 3197 aa12.11□□□□□ -0.47
TMEM200A-201ENST00000296978 AP3D1O14617 1153 aa12.1□□□□□ -0.47
TMEM200A-201ENST00000296978 SEPT4O43236 478 aa12.1□□□□□ -0.47
TMEM200A-201ENST00000296978 IFI30P13284 250 aa12.1□□□□□ -0.47
TMEM200A-201ENST00000296978 TNFSF8P32971 234 aa12.1□□□□□ -0.47
TMEM200A-201ENST00000296978 GRK5P34947 590 aa12.1□□□□□ -0.47
TMEM200A-201ENST00000296978 ASMTP46597 345 aa12.1□□□□□ -0.47
TMEM200A-201ENST00000296978 TGM4P49221 684 aa12.1□□□□□ -0.47
TMEM200A-201ENST00000296978 SCN1BQ07699 218 aa12.1□□□□□ -0.47
TMEM200A-201ENST00000296978 FBXO43Q4G163 708 aa12.1□□□□□ -0.47
TMEM200A-201ENST00000296978 PLET1Q6UQ28 207 aa12.1□□□□□ -0.47
TMEM200A-201ENST00000296978 Q6ZVL8 140 aa12.1□□□□□ -0.47
TMEM200A-201ENST00000296978 ZNF551Q7Z340 670 aaPredicted RBP12.1□□□□□ -0.47
TMEM200A-201ENST00000296978 SLC46A3Q7Z3Q1 461 aa12.1□□□□□ -0.47
TMEM200A-201ENST00000296978 CMTM8Q8IZV2 173 aa12.1□□□□□ -0.47
TMEM200A-201ENST00000296978 GPR151Q8TDV0 419 aa12.1□□□□□ -0.47
TMEM200A-201ENST00000296978 NACC2Q96BF6 587 aa12.1□□□□□ -0.47
TMEM200A-201ENST00000296978 OTUB1Q96FW1 271 aaPredicted RBP12.1□□□□□ -0.47
TMEM200A-201ENST00000296978 NEDD4LQ96PU5 975 aa12.1□□□□□ -0.47
TMEM200A-201ENST00000296978 SLC22A12Q96S37 553 aa12.1□□□□□ -0.47
TMEM200A-201ENST00000296978 NUFIP1Q9UHK0 495 aaKnown RBP12.1□□□□□ -0.47
TMEM200A-201ENST00000296978 OSGIN1Q9UJX0 560 aa12.1□□□□□ -0.47
TMEM200A-201ENST00000296978 ANGPT4Q9Y264 503 aa12.1□□□□□ -0.47
TMEM200A-201ENST00000296978 CCL27Q9Y4X3 112 aa12.1□□□□□ -0.47
TMEM200A-201ENST00000296978 ZNF236Q9UL36 1845 aa12.1□□□□□ -0.47
TMEM200A-201ENST00000296978 CNTRLQ7Z7A1 2325 aa12.1□□□□□ -0.47
TMEM200A-201ENST00000296978 OR6C70A6NIJ9 312 aa12.1□□□□□ -0.47
TMEM200A-201ENST00000296978 UNCXA6NJT0 531 aa12.1□□□□□ -0.47
TMEM200A-201ENST00000296978 FAM25AB3EWG3 89 aa12.1□□□□□ -0.47
TMEM200A-201ENST00000296978 FAM25CB3EWG5 89 aa12.1□□□□□ -0.47
TMEM200A-201ENST00000296978 FAM25GB3EWG6 89 aa12.1□□□□□ -0.47
TMEM200A-201ENST00000296978 M0R082 166 aa12.1□□□□□ -0.47
TMEM200A-201ENST00000296978 RPLP2P05387 115 aaKnown RBP12.1□□□□□ -0.47
TMEM200A-201ENST00000296978 HLA-EP13747 358 aa12.1□□□□□ -0.47
TMEM200A-201ENST00000296978 MYL12AP19105 171 aa12.1□□□□□ -0.47
TMEM200A-201ENST00000296978 GABRR2P28476 465 aa12.1□□□□□ -0.47
TMEM200A-201ENST00000296978 KHDRBS1Q07666 443 aaKnown RBP eCLIP12.1□□□□□ -0.47
TMEM200A-201ENST00000296978 QPRTQ15274 297 aa12.1□□□□□ -0.47
TMEM200A-201ENST00000296978 TBCEQ15813 527 aaPredicted RBP12.1□□□□□ -0.47
TMEM200A-201ENST00000296978 COX20Q5RI15 118 aa12.1□□□□□ -0.47
TMEM200A-201ENST00000296978 LRIF1Q5T3J3 769 aa12.1□□□□□ -0.47
TMEM200A-201ENST00000296978 AGAP6Q5VW22 663 aa12.1□□□□□ -0.47
TMEM200A-201ENST00000296978 BCDIN3DQ7Z5W3 292 aaKnown RBP12.1□□□□□ -0.47
TMEM200A-201ENST00000296978 DDX53Q86TM3 631 aaKnown RBP12.1□□□□□ -0.47
TMEM200A-201ENST00000296978 CCDC71Q8IV32 467 aaPredicted RBP12.1□□□□□ -0.47
TMEM200A-201ENST00000296978 IQCF2Q8IXL9 164 aa12.1□□□□□ -0.47
TMEM200A-201ENST00000296978 ZNF366Q8N895 744 aa12.1□□□□□ -0.47
TMEM200A-201ENST00000296978 USP7Q93009 1102 aa12.1□□□□□ -0.47
TMEM200A-201ENST00000296978 HRASLS5Q96KN8 279 aa12.1□□□□□ -0.47
TMEM200A-201ENST00000296978 AGAP4Q96P64 663 aa12.1□□□□□ -0.47
TMEM200A-201ENST00000296978 SMURF1Q9HCE7 757 aa12.1□□□□□ -0.47
TMEM200A-201ENST00000296978 A0A0G2JN53 185 aa12.1□□□□□ -0.47
TMEM200A-201ENST00000296978 GUCY1B2O75343 617 aa12.1□□□□□ -0.47
TMEM200A-201ENST00000296978 PSIP1O75475 530 aaKnown RBP12.1□□□□□ -0.47
TMEM200A-201ENST00000296978 KLK1P06870 262 aa12.1□□□□□ -0.47
TMEM200A-201ENST00000296978 AOAHP28039 575 aa12.1□□□□□ -0.47
TMEM200A-201ENST00000296978 EPHB3P54753 998 aa12.1□□□□□ -0.47
TMEM200A-201ENST00000296978 HSPB3Q12988 150 aa12.1□□□□□ -0.47
TMEM200A-201ENST00000296978 TARDBPQ13148 414 aaKnown RBP eCLIP12.1□□□□□ -0.47
TMEM200A-201ENST00000296978 PTGES3Q15185 160 aaKnown RBP12.1□□□□□ -0.47
TMEM200A-201ENST00000296978 SYCE2Q6PIF2 218 aa12.1□□□□□ -0.47
TMEM200A-201ENST00000296978 CRTC1Q6UUV9 634 aa12.1□□□□□ -0.47
TMEM200A-201ENST00000296978 Q6ZVU0 165 aa12.1□□□□□ -0.47
TMEM200A-201ENST00000296978 CELF5Q8N6W0 485 aaKnown RBP12.1□□□□□ -0.47
TMEM200A-201ENST00000296978 XAGE5Q8WWM1 108 aa12.1□□□□□ -0.47
TMEM200A-201ENST00000296978 ZNF566Q969W8 418 aa12.1□□□□□ -0.47
TMEM200A-201ENST00000296978 CIDECQ96AQ7 238 aaPredicted RBP12.1□□□□□ -0.47
TMEM200A-201ENST00000296978 EMILIN2Q9BXX0 1053 aa12.1□□□□□ -0.47
TMEM200A-201ENST00000296978 SMG9Q9H0W8 520 aaKnown RBP12.1□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms