RNA–Protein interactions for RNA: ENST00000292476.9

CPSF4-201, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CPSF4, Length 1,691 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-201ENST00000292476 OR10A6Q8NH74 314 aa16.11■□□□□ 0.17
CPSF4-201ENST00000292476 OR1E3Q8WZA6 343 aa16.11■□□□□ 0.17
CPSF4-201ENST00000292476 SMPDL3AQ92484 453 aa16.11■□□□□ 0.17
CPSF4-201ENST00000292476 FIG4Q92562 907 aa16.11■□□□□ 0.17
CPSF4-201ENST00000292476 TBC1D20Q96BZ9 403 aa16.11■□□□□ 0.17
CPSF4-201ENST00000292476 WDR34Q96EX3 536 aa16.11■□□□□ 0.17
CPSF4-201ENST00000292476 SLC47A1Q96FL8 570 aa16.11■□□□□ 0.17
CPSF4-201ENST00000292476 SPACA7Q96KW9 195 aa16.11■□□□□ 0.17
CPSF4-201ENST00000292476 FCRL1Q96LA6 429 aa16.11■□□□□ 0.17
CPSF4-201ENST00000292476 RBM4BQ9BQ04 359 aaKnown RBP16.11■□□□□ 0.17
CPSF4-201ENST00000292476 RBM4Q9BWF3 364 aaKnown RBP16.11■□□□□ 0.17
CPSF4-201ENST00000292476 OSBPL10Q9BXB5 764 aa16.11■□□□□ 0.17
CPSF4-201ENST00000292476 DCAF13Q9NV06 445 aaKnown RBP16.11■□□□□ 0.17
CPSF4-201ENST00000292476 PCOLCE2Q9UKZ9 415 aa16.11■□□□□ 0.17
CPSF4-201ENST00000292476 INVSQ9Y283 1065 aa16.11■□□□□ 0.17
CPSF4-201ENST00000292476 FANCMQ8IYD8 2048 aa16.11■□□□□ 0.17
CPSF4-201ENST00000292476 G3V2T6 193 aa16.11■□□□□ 0.17
CPSF4-201ENST00000292476 H0Y8X5 98 aa16.11■□□□□ 0.17
CPSF4-201ENST00000292476 NPPBP16860 134 aa16.11■□□□□ 0.17
CPSF4-201ENST00000292476 S100A3P33764 101 aa16.11■□□□□ 0.17
CPSF4-201ENST00000292476 FNTBP49356 437 aa16.11■□□□□ 0.17
CPSF4-201ENST00000292476 BLKP51451 505 aa16.11■□□□□ 0.17
CPSF4-201ENST00000292476 ABHD18Q0P651 414 aa16.11■□□□□ 0.17
CPSF4-201ENST00000292476 ILF3Q12906 894 aaKnown RBP eCLIP16.11■□□□□ 0.17
CPSF4-201ENST00000292476 BIRC2Q13490 618 aa16.11■□□□□ 0.17
CPSF4-201ENST00000292476 TUBA3CQ13748 450 aa16.11■□□□□ 0.17
CPSF4-201ENST00000292476 DOC2AQ14183 400 aa16.11■□□□□ 0.17
CPSF4-201ENST00000292476 RFX4Q33E94 735 aa16.11■□□□□ 0.17
CPSF4-201ENST00000292476 PRAMEF14Q5SWL7 426 aa16.11■□□□□ 0.17
CPSF4-201ENST00000292476 PRAMEF13Q5VWM6 474 aa16.11■□□□□ 0.17
CPSF4-201ENST00000292476 THAP5Q7Z6K1 395 aa16.11■□□□□ 0.17
CPSF4-201ENST00000292476 CLVS1Q8IUQ0 354 aaPredicted RBP16.11■□□□□ 0.17
CPSF4-201ENST00000292476 CROCCP3Q8IVE0 287 aa16.11■□□□□ 0.17
CPSF4-201ENST00000292476 LRRC56Q8IYG6 542 aaPredicted RBP16.11■□□□□ 0.17
CPSF4-201ENST00000292476 EID3Q8N140 333 aa16.11■□□□□ 0.17
CPSF4-201ENST00000292476 CLEC4FQ8N1N0 589 aa16.11■□□□□ 0.17
CPSF4-201ENST00000292476 GAB3Q8WWW8 586 aa16.11■□□□□ 0.17
CPSF4-201ENST00000292476 FAM162AQ96A26 154 aa16.11■□□□□ 0.17
CPSF4-201ENST00000292476 OR4K3Q96R72 315 aa16.11■□□□□ 0.17
CPSF4-201ENST00000292476 INSM2Q96T92 566 aaPredicted RBP16.11■□□□□ 0.17
CPSF4-201ENST00000292476 BRF2Q9HAW0 419 aa16.11■□□□□ 0.17
CPSF4-201ENST00000292476 ZSCAN32Q9NX65 697 aa16.11■□□□□ 0.17
CPSF4-201ENST00000292476 IFT80Q9P2H3 777 aaPredicted RBP16.11■□□□□ 0.17
CPSF4-201ENST00000292476 DMDP11532 3685 aa16.1■□□□□ 0.17
CPSF4-201ENST00000292476 E7EQ34 232 aa16.1■□□□□ 0.17
CPSF4-201ENST00000292476 SEC24DO94855 1032 aaPredicted RBP16.1■□□□□ 0.17
CPSF4-201ENST00000292476 RASGRP1O95267 797 aa16.1■□□□□ 0.17
CPSF4-201ENST00000292476 PDYNP01213 254 aa16.1■□□□□ 0.17
CPSF4-201ENST00000292476 MT-ND1P03886 318 aa16.1■□□□□ 0.17
CPSF4-201ENST00000292476 C1GALT1C1LP0DN25 315 aa16.1■□□□□ 0.17
CPSF4-201ENST00000292476 CXCR2P25025 360 aa16.1■□□□□ 0.17
CPSF4-201ENST00000292476 NBL1P41271 181 aa16.1■□□□□ 0.17
CPSF4-201ENST00000292476 GZMMP51124 257 aa16.1■□□□□ 0.17
CPSF4-201ENST00000292476 GABARAPL2P60520 117 aa16.1■□□□□ 0.17
CPSF4-201ENST00000292476 PHEXP78562 749 aa16.1■□□□□ 0.17
CPSF4-201ENST00000292476 PPP2R2BQ00005 443 aa16.1■□□□□ 0.17
CPSF4-201ENST00000292476 TMEM214Q6NUQ4 689 aaKnown RBP16.1■□□□□ 0.17
CPSF4-201ENST00000292476 MED27Q6P2C8 311 aa16.1■□□□□ 0.17
CPSF4-201ENST00000292476 SLCO4C1Q6ZQN7 724 aa16.1■□□□□ 0.17
CPSF4-201ENST00000292476 OFCC1Q8IZS5 231 aa16.1■□□□□ 0.17
CPSF4-201ENST00000292476 C8orf59Q8N0T1 100 aaPredicted RBP16.1■□□□□ 0.17
CPSF4-201ENST00000292476 ZCCHC7Q8N3Z6 543 aaKnown RBP16.1■□□□□ 0.17
CPSF4-201ENST00000292476 OR5K1Q8NHB7 308 aa16.1■□□□□ 0.17
CPSF4-201ENST00000292476 SLC5A11Q8WWX8 675 aa16.1■□□□□ 0.17
CPSF4-201ENST00000292476 HDAC2Q92769 488 aaKnown RBP16.1■□□□□ 0.17
CPSF4-201ENST00000292476 SH3KBP1Q96B97 665 aa16.1■□□□□ 0.17
CPSF4-201ENST00000292476 KLHDC7BQ96G42 594 aa16.1■□□□□ 0.17
CPSF4-201ENST00000292476 PDXPQ96GD0 296 aa16.1■□□□□ 0.17
CPSF4-201ENST00000292476 REXO5Q96IC2 774 aaKnown RBP16.1■□□□□ 0.17
CPSF4-201ENST00000292476 TPSD1Q9BZJ3 242 aa16.1■□□□□ 0.17
CPSF4-201ENST00000292476 CXorf21Q9HAI6 301 aa16.1■□□□□ 0.17
CPSF4-201ENST00000292476 SERHLQ9NQF3 203 aa16.1■□□□□ 0.17
CPSF4-201ENST00000292476 IMP3Q9NV31 184 aaKnown RBP16.1■□□□□ 0.17
CPSF4-201ENST00000292476 WDR37Q9Y2I8 494 aa16.1■□□□□ 0.17
CPSF4-201ENST00000292476 V9GYQ6 96 aa16.1■□□□□ 0.17
CPSF4-201ENST00000292476 A0A1B0GVG6 124 aa16.09■□□□□ 0.17
CPSF4-201ENST00000292476 METTL12A8MUP2 240 aa16.09■□□□□ 0.17
CPSF4-201ENST00000292476 CREG1O75629 220 aa16.09■□□□□ 0.17
CPSF4-201ENST00000292476 CST1P01037 141 aa16.09■□□□□ 0.17
CPSF4-201ENST00000292476 CD27P26842 260 aa16.09■□□□□ 0.17
CPSF4-201ENST00000292476 TRPC1P48995 793 aa16.09■□□□□ 0.17
CPSF4-201ENST00000292476 RAB28P51157 221 aa16.09■□□□□ 0.17
CPSF4-201ENST00000292476 C21orf58P58505 322 aa16.09■□□□□ 0.17
CPSF4-201ENST00000292476 TOP3AQ13472 1001 aaPredicted RBP16.09■□□□□ 0.17
CPSF4-201ENST00000292476 IL18R1Q13478 541 aa16.09■□□□□ 0.17
CPSF4-201ENST00000292476 TSTA3Q13630 321 aaPredicted RBP16.09■□□□□ 0.17
CPSF4-201ENST00000292476 LRRC23Q53EV4 343 aaPredicted RBP16.09■□□□□ 0.17
CPSF4-201ENST00000292476 SGO1Q5FBB7 561 aa16.09■□□□□ 0.17
CPSF4-201ENST00000292476 ZC3H12BQ5HYM0 836 aaKnown RBP16.09■□□□□ 0.17
CPSF4-201ENST00000292476 OTUD3Q5T2D3 398 aaPredicted RBP16.09■□□□□ 0.17
CPSF4-201ENST00000292476 BROXQ5VW32 411 aa16.09■□□□□ 0.17
CPSF4-201ENST00000292476 ZC3H14Q6PJT7 736 aaKnown RBP16.09■□□□□ 0.17
CPSF4-201ENST00000292476 RD3Q7Z3Z2 195 aa16.09■□□□□ 0.17
CPSF4-201ENST00000292476 STK32CQ86UX6 486 aa16.09■□□□□ 0.17
CPSF4-201ENST00000292476 IQCHQ86VS3 1027 aa16.09■□□□□ 0.17
CPSF4-201ENST00000292476 KRTCAP2Q8N6L1 136 aa16.09■□□□□ 0.17
CPSF4-201ENST00000292476 SNX19Q92543 992 aa16.09■□□□□ 0.17
CPSF4-201ENST00000292476 NELL1Q92832 810 aa16.09■□□□□ 0.17
CPSF4-201ENST00000292476 NEIL2Q969S2 332 aa16.09■□□□□ 0.17
CPSF4-201ENST00000292476 C12orf43Q96C57 262 aaKnown RBP16.09■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 106.6 ms