RNA–Protein interactions for RNA: ENST00000291386.3

SSU72-201, Transcript of SSU72 homolog, RNA polymerase II CTD phosphatase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSU72, Length 1,290 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSU72-201ENST00000291386 ZGLP1P0C6A0 271 aa25.47■■□□□ 1.67
SSU72-201ENST00000291386 MYZAPP0CAP1 466 aa25.47■■□□□ 1.67
SSU72-201ENST00000291386 RAB8AP61006 207 aa25.47■■□□□ 1.67
SSU72-201ENST00000291386 LCP2Q13094 533 aa25.47■■□□□ 1.67
SSU72-201ENST00000291386 ZRSR2Q15696 482 aaKnown RBP25.47■■□□□ 1.67
SSU72-201ENST00000291386 DEFB134Q4QY38 66 aa25.47■■□□□ 1.67
SSU72-201ENST00000291386 TMEM35AQ53FP2 167 aa25.47■■□□□ 1.67
SSU72-201ENST00000291386 THAP4Q8WY91 577 aa25.47■■□□□ 1.67
SSU72-201ENST00000291386 MIEF2Q96C03 454 aa25.47■■□□□ 1.67
SSU72-201ENST00000291386 CMTM7Q96FZ5 175 aa25.47■■□□□ 1.67
SSU72-201ENST00000291386 STMN4Q9H169 189 aaPredicted RBP25.47■■□□□ 1.67
SSU72-201ENST00000291386 CENPHQ9H3R5 247 aa25.47■■□□□ 1.67
SSU72-201ENST00000291386 CFAP47Q6ZTR5 3102 aa25.47■■□□□ 1.67
SSU72-201ENST00000291386 FOXE1O00358 373 aaPredicted RBP25.46■■□□□ 1.67
SSU72-201ENST00000291386 ITGB2P05107 769 aa25.46■■□□□ 1.67
SSU72-201ENST00000291386 UMODP07911 640 aa25.46■■□□□ 1.67
SSU72-201ENST00000291386 FURINP09958 794 aa25.46■■□□□ 1.67
SSU72-201ENST00000291386 IL10P22301 178 aa25.46■■□□□ 1.67
SSU72-201ENST00000291386 ARL1P40616 181 aaPredicted RBP25.46■■□□□ 1.67
SSU72-201ENST00000291386 ETV4P43268 484 aa25.46■■□□□ 1.67
SSU72-201ENST00000291386 ARFIP1P53367 373 aa25.46■■□□□ 1.67
SSU72-201ENST00000291386 PHEXP78562 749 aa25.46■■□□□ 1.67
SSU72-201ENST00000291386 SYT16Q17RD7 645 aa25.46■■□□□ 1.67
SSU72-201ENST00000291386 FAM69BQ5VUD6 431 aa25.46■■□□□ 1.67
SSU72-201ENST00000291386 ABHD17CQ6PCB6 329 aa25.46■■□□□ 1.67
SSU72-201ENST00000291386 SRFBP1Q8NEF9 429 aaKnown RBP25.46■■□□□ 1.67
SSU72-201ENST00000291386 OR51Q1Q8NH59 317 aa25.46■■□□□ 1.67
SSU72-201ENST00000291386 DMRT3Q9NQL9 472 aa25.46■■□□□ 1.67
SSU72-201ENST00000291386 CDC14CA4D256 554 aa25.45■■□□□ 1.66
SSU72-201ENST00000291386 H3BQF6 201 aa25.45■■□□□ 1.66
SSU72-201ENST00000291386 ERI3O43414 337 aaKnown RBP25.45■■□□□ 1.66
SSU72-201ENST00000291386 RDH16O75452 317 aa25.45■■□□□ 1.66
SSU72-201ENST00000291386 ATXN8OSP0DMR3 200 aa25.45■■□□□ 1.66
SSU72-201ENST00000291386 PRKAR1AP10644 381 aa25.45■■□□□ 1.66
SSU72-201ENST00000291386 TSPAN8P19075 237 aa25.45■■□□□ 1.66
SSU72-201ENST00000291386 NAGLUP54802 743 aa25.45■■□□□ 1.66
SSU72-201ENST00000291386 PKNOX1P55347 436 aa25.45■■□□□ 1.66
SSU72-201ENST00000291386 MAT1AQ00266 395 aaKnown RBP25.45■■□□□ 1.66
SSU72-201ENST00000291386 RHDQ02161 417 aa25.45■■□□□ 1.66
SSU72-201ENST00000291386 KLC1Q07866 573 aa25.45■■□□□ 1.66
SSU72-201ENST00000291386 TGM3Q08188 693 aa25.45■■□□□ 1.66
SSU72-201ENST00000291386 VWA2Q5GFL6 755 aa25.45■■□□□ 1.66
SSU72-201ENST00000291386 DEPDC1Q5TB30 811 aa25.45■■□□□ 1.66
SSU72-201ENST00000291386 ATP1A1-AS1Q5TC04 95 aa25.45■■□□□ 1.66
SSU72-201ENST00000291386 LETMD1Q6P1Q0 360 aa25.45■■□□□ 1.66
SSU72-201ENST00000291386 TRIM40Q6P9F5 258 aa25.45■■□□□ 1.66
SSU72-201ENST00000291386 CHSY3Q70JA7 882 aa25.45■■□□□ 1.66
SSU72-201ENST00000291386 RAB43Q86YS6 212 aa25.45■■□□□ 1.66
SSU72-201ENST00000291386 C10orf107Q8IVU9 208 aa25.45■■□□□ 1.66
SSU72-201ENST00000291386 ZC3H7AQ8IWR0 971 aaKnown RBP25.45■■□□□ 1.66
SSU72-201ENST00000291386 QRFPRQ96P65 431 aa25.45■■□□□ 1.66
SSU72-201ENST00000291386 IP6K3Q96PC2 410 aa25.45■■□□□ 1.66
SSU72-201ENST00000291386 F2RL3Q96RI0 385 aa25.45■■□□□ 1.66
SSU72-201ENST00000291386 NPLQ9BXD5 320 aaPredicted RBP25.45■■□□□ 1.66
SSU72-201ENST00000291386 TMBIM4Q9HC24 238 aa25.45■■□□□ 1.66
SSU72-201ENST00000291386 ACSS2Q9NR19 701 aa25.45■■□□□ 1.66
SSU72-201ENST00000291386 POLHQ9Y253 713 aa25.45■■□□□ 1.66
SSU72-201ENST00000291386 A0A088AWK7 358 aa25.44■■□□□ 1.66
SSU72-201ENST00000291386 TRIM13O60858 407 aa25.44■■□□□ 1.66
SSU72-201ENST00000291386 IGHEP01854 428 aa25.44■■□□□ 1.66
SSU72-201ENST00000291386 ZNF10P21506 573 aaPredicted RBP25.44■■□□□ 1.66
SSU72-201ENST00000291386 ASPHQ12797 758 aa25.44■■□□□ 1.66
SSU72-201ENST00000291386 KHDRBS2Q5VWX1 349 aaKnown RBP25.44■■□□□ 1.66
SSU72-201ENST00000291386 FRG2Q64ET8 278 aa25.44■■□□□ 1.66
SSU72-201ENST00000291386 FRMD7Q6ZUT3 714 aa25.44■■□□□ 1.66
SSU72-201ENST00000291386 GPRIN3Q6ZVF9 776 aa25.44■■□□□ 1.66
SSU72-201ENST00000291386 MED25Q71SY5 747 aa25.44■■□□□ 1.66
SSU72-201ENST00000291386 CCNYL1Q8N7R7 359 aa25.44■■□□□ 1.66
SSU72-201ENST00000291386 FAR2Q96K12 515 aa25.44■■□□□ 1.66
SSU72-201ENST00000291386 FRG2BQ96QU4 278 aa25.44■■□□□ 1.66
SSU72-201ENST00000291386 OR1F2PQ96R84 312 aa25.44■■□□□ 1.66
SSU72-201ENST00000291386 MTERF1Q99551 399 aaKnown RBP25.44■■□□□ 1.66
SSU72-201ENST00000291386 YIPF2Q9BWQ6 316 aa25.44■■□□□ 1.66
SSU72-201ENST00000291386 ROGDIQ9GZN7 287 aa25.44■■□□□ 1.66
SSU72-201ENST00000291386 SOX17Q9H6I2 414 aaPredicted RBP25.44■■□□□ 1.66
SSU72-201ENST00000291386 PRDM7Q9NQW5 492 aa25.44■■□□□ 1.66
SSU72-201ENST00000291386 SEMA3GQ9NS98 782 aa25.44■■□□□ 1.66
SSU72-201ENST00000291386 HCN3Q9P1Z3 774 aa25.44■■□□□ 1.66
SSU72-201ENST00000291386 LHX6Q9UPM6 363 aa25.44■■□□□ 1.66
SSU72-201ENST00000291386 ITPR1Q14643 2758 aa25.43■■□□□ 1.66
SSU72-201ENST00000291386 GOLGA6L10A6NI86 522 aa25.43■■□□□ 1.66
SSU72-201ENST00000291386 MAGEB17A8MXT2 336 aa25.43■■□□□ 1.66
SSU72-201ENST00000291386 OR4F21O95013 312 aa25.43■■□□□ 1.66
SSU72-201ENST00000291386 BMP10O95393 424 aa25.43■■□□□ 1.66
SSU72-201ENST00000291386 B3GALT4O96024 378 aa25.43■■□□□ 1.66
SSU72-201ENST00000291386 TGFB1P01137 390 aa25.43■■□□□ 1.66
SSU72-201ENST00000291386 CYC1P08574 325 aa25.43■■□□□ 1.66
SSU72-201ENST00000291386 MMP11P24347 488 aa25.43■■□□□ 1.66
SSU72-201ENST00000291386 PTX3P26022 381 aaPredicted RBP25.43■■□□□ 1.66
SSU72-201ENST00000291386 ALDH3A1P30838 453 aa25.43■■□□□ 1.66
SSU72-201ENST00000291386 FOXL2P58012 376 aa25.43■■□□□ 1.66
SSU72-201ENST00000291386 BTN3A2P78410 334 aa25.43■■□□□ 1.66
SSU72-201ENST00000291386 CUL3Q13618 768 aa25.43■■□□□ 1.66
SSU72-201ENST00000291386 UBE3DQ7Z6J8 389 aa25.43■■□□□ 1.66
SSU72-201ENST00000291386 TMEM151BQ8IW70 566 aa25.43■■□□□ 1.66
SSU72-201ENST00000291386 OR5T3Q8NGG3 340 aa25.43■■□□□ 1.66
SSU72-201ENST00000291386 KCNC2Q96PR1 638 aa25.43■■□□□ 1.66
SSU72-201ENST00000291386 TBCDQ9BTW9 1192 aa25.43■■□□□ 1.66
SSU72-201ENST00000291386 SLC29A3Q9BZD2 475 aa25.43■■□□□ 1.66
SSU72-201ENST00000291386 SNX6Q9UNH7 406 aa25.43■■□□□ 1.66
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms