RNA–Protein interactions for RNA: ENST00000288976.3

PTPDC1-201, Transcript of protein tyrosine phosphatase domain containing 1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PTPDC1, Length 4,398 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPDC1-201ENST00000288976 PATE3B3GLJ2 98 aa8.07□□□□□ -1.12
PTPDC1-201ENST00000288976 TRIM38O00635 465 aa8.07□□□□□ -1.12
PTPDC1-201ENST00000288976 BMP10O95393 424 aa8.07□□□□□ -1.12
PTPDC1-201ENST00000288976 CDK4P11802 303 aa8.07□□□□□ -1.12
PTPDC1-201ENST00000288976 SEC24CP53992 1094 aa8.07□□□□□ -1.12
PTPDC1-201ENST00000288976 CDH13P55290 713 aa8.07□□□□□ -1.12
PTPDC1-201ENST00000288976 MAD2L1Q13257 205 aaPredicted RBP8.07□□□□□ -1.12
PTPDC1-201ENST00000288976 MANEAQ5SRI9 462 aa8.07□□□□□ -1.12
PTPDC1-201ENST00000288976 USP53Q70EK8 1073 aa8.07□□□□□ -1.12
PTPDC1-201ENST00000288976 MAVSQ7Z434 540 aa8.07□□□□□ -1.12
PTPDC1-201ENST00000288976 SPRED1Q7Z699 444 aa8.07□□□□□ -1.12
PTPDC1-201ENST00000288976 PAQR7Q86WK9 346 aa8.07□□□□□ -1.12
PTPDC1-201ENST00000288976 P3H2Q8IVL5 708 aa8.07□□□□□ -1.12
PTPDC1-201ENST00000288976 FNDC5Q8NAU1 212 aa8.07□□□□□ -1.12
PTPDC1-201ENST00000288976 NT5CQ8TCD5 201 aa8.07□□□□□ -1.12
PTPDC1-201ENST00000288976 ABTB1Q969K4 478 aaPredicted RBP8.07□□□□□ -1.12
PTPDC1-201ENST00000288976 APOLD1Q96LR9 279 aa8.07□□□□□ -1.12
PTPDC1-201ENST00000288976 GEMIN8Q9NWZ8 242 aaKnown RBP8.07□□□□□ -1.12
PTPDC1-201ENST00000288976 LRIT1Q9P2V4 623 aa8.07□□□□□ -1.12
PTPDC1-201ENST00000288976 RNF11Q9Y3C5 154 aa8.07□□□□□ -1.12
PTPDC1-201ENST00000288976 DNAJC15Q9Y5T4 150 aa8.07□□□□□ -1.12
PTPDC1-201ENST00000288976 ADAMTS9Q9P2N4 1935 aa8.07□□□□□ -1.12
PTPDC1-201ENST00000288976 A0A0G2JN53 185 aa8.07□□□□□ -1.12
PTPDC1-201ENST00000288976 EME2A4GXA9 379 aaPredicted RBP8.07□□□□□ -1.12
PTPDC1-201ENST00000288976 E9PBE3 544 aa8.07□□□□□ -1.12
PTPDC1-201ENST00000288976 CDH1P12830 882 aa8.07□□□□□ -1.12
PTPDC1-201ENST00000288976 CCR10P46092 362 aa8.07□□□□□ -1.12
PTPDC1-201ENST00000288976 CASP9P55211 416 aa8.07□□□□□ -1.12
PTPDC1-201ENST00000288976 MAPRE2Q15555 327 aa8.07□□□□□ -1.12
PTPDC1-201ENST00000288976 DEPDC1Q5TB30 811 aa8.07□□□□□ -1.12
PTPDC1-201ENST00000288976 FRG2Q64ET8 278 aa8.07□□□□□ -1.12
PTPDC1-201ENST00000288976 PATE1Q8WXA2 126 aa8.07□□□□□ -1.12
PTPDC1-201ENST00000288976 PYCR2Q96C36 320 aa8.07□□□□□ -1.12
PTPDC1-201ENST00000288976 FRG2BQ96QU4 278 aa8.07□□□□□ -1.12
PTPDC1-201ENST00000288976 ELL3Q9HB65 397 aaPredicted RBP8.07□□□□□ -1.12
PTPDC1-201ENST00000288976 C1GALT1Q9NS00 363 aa8.07□□□□□ -1.12
PTPDC1-201ENST00000288976 TMCC3Q9ULS5 477 aa8.07□□□□□ -1.12
PTPDC1-201ENST00000288976 IGHV1OR21-1A0A087WYE8 117 aa8.06□□□□□ -1.12
PTPDC1-201ENST00000288976 TLCD2A6NGC4 264 aa8.06□□□□□ -1.12
PTPDC1-201ENST00000288976 A8MUA0 341 aa8.06□□□□□ -1.12
PTPDC1-201ENST00000288976 RGS14O43566 566 aa8.06□□□□□ -1.12
PTPDC1-201ENST00000288976 CAPN1P07384 714 aa8.06□□□□□ -1.12
PTPDC1-201ENST00000288976 COX7A2P14406 83 aa8.06□□□□□ -1.12
PTPDC1-201ENST00000288976 SSR2P43308 183 aa8.06□□□□□ -1.12
PTPDC1-201ENST00000288976 CSNK1G2P78368 415 aa8.06□□□□□ -1.12
PTPDC1-201ENST00000288976 OGFOD2Q6N063 350 aa8.06□□□□□ -1.12
PTPDC1-201ENST00000288976 SPATA19Q7Z5L4 167 aa8.06□□□□□ -1.12
PTPDC1-201ENST00000288976 TMPRSS11BQ86T26 416 aa8.06□□□□□ -1.12
PTPDC1-201ENST00000288976 PLXDC1Q8IUK5 500 aa8.06□□□□□ -1.12
PTPDC1-201ENST00000288976 FAM20CQ8IXL6 584 aa8.06□□□□□ -1.12
PTPDC1-201ENST00000288976 NRBF2Q96F24 287 aa8.06□□□□□ -1.12
PTPDC1-201ENST00000288976 KCNS3Q9BQ31 491 aa8.06□□□□□ -1.12
PTPDC1-201ENST00000288976 THTPAQ9BU02 230 aa8.06□□□□□ -1.12
PTPDC1-201ENST00000288976 TMEM120AQ9BXJ8 343 aa8.06□□□□□ -1.12
PTPDC1-201ENST00000288976 DPY30Q9C005 99 aa8.06□□□□□ -1.12
PTPDC1-201ENST00000288976 REXO4Q9GZR2 422 aaKnown RBP8.06□□□□□ -1.12
PTPDC1-201ENST00000288976 XKR8Q9H6D3 395 aa8.06□□□□□ -1.12
PTPDC1-201ENST00000288976 TMEM9BQ9NQ34 198 aa8.06□□□□□ -1.12
PTPDC1-201ENST00000288976 ZC4H2Q9NQZ6 224 aa8.06□□□□□ -1.12
PTPDC1-201ENST00000288976 SH2B3Q9UQQ2 575 aa8.06□□□□□ -1.12
PTPDC1-201ENST00000288976 AP1M2Q9Y6Q5 423 aa8.06□□□□□ -1.12
PTPDC1-201ENST00000288976 IGKV1-8A0A0C4DH67 115 aa8.06□□□□□ -1.12
PTPDC1-201ENST00000288976 SEMA3DO95025 777 aa8.06□□□□□ -1.12
PTPDC1-201ENST00000288976 CDH2P19022 906 aaPredicted RBP8.06□□□□□ -1.12
PTPDC1-201ENST00000288976 CD22P20273 847 aa8.06□□□□□ -1.12
PTPDC1-201ENST00000288976 GRIA3P42263 894 aa8.06□□□□□ -1.12
PTPDC1-201ENST00000288976 TSFMP43897 325 aaKnown RBP8.06□□□□□ -1.12
PTPDC1-201ENST00000288976 IDH3AP50213 366 aa8.06□□□□□ -1.12
PTPDC1-201ENST00000288976 NUDT2P50583 147 aa8.06□□□□□ -1.12
PTPDC1-201ENST00000288976 PER3P56645 1201 aa8.06□□□□□ -1.12
PTPDC1-201ENST00000288976 EPS8Q12929 822 aa8.06□□□□□ -1.12
PTPDC1-201ENST00000288976 ELOAQ14241 798 aaKnown RBP8.06□□□□□ -1.12
PTPDC1-201ENST00000288976 KIAA1614Q5VZ46 1190 aa8.06□□□□□ -1.12
PTPDC1-201ENST00000288976 GALNT4Q8N4A0 578 aa8.06□□□□□ -1.12
PTPDC1-201ENST00000288976 NCSTNQ92542 709 aa8.06□□□□□ -1.12
PTPDC1-201ENST00000288976 PPP3R2Q96LZ3 170 aa8.06□□□□□ -1.12
PTPDC1-201ENST00000288976 TBCDQ9BTW9 1192 aa8.06□□□□□ -1.12
PTPDC1-201ENST00000288976 TNFRSF12AQ9NP84 129 aa8.06□□□□□ -1.12
PTPDC1-201ENST00000288976 HRASLS2Q9NWW9 162 aa8.06□□□□□ -1.12
PTPDC1-201ENST00000288976 MRPS33Q9Y291 106 aaKnown RBP8.06□□□□□ -1.12
PTPDC1-201ENST00000288976 PRAMEF33A0A0G2JMD5 474 aa8.06□□□□□ -1.12
PTPDC1-201ENST00000288976 NR5A2O00482 541 aa8.06□□□□□ -1.12
PTPDC1-201ENST00000288976 KLHL41O60662 606 aa8.06□□□□□ -1.12
PTPDC1-201ENST00000288976 ULK1O75385 1050 aa8.06□□□□□ -1.12
PTPDC1-201ENST00000288976 PRDX3P30048 256 aaKnown RBP8.06□□□□□ -1.12
PTPDC1-201ENST00000288976 ADSLP30566 484 aaPredicted RBP8.06□□□□□ -1.12
PTPDC1-201ENST00000288976 CSTF2P33240 577 aaKnown RBP eCLIP8.06□□□□□ -1.12
PTPDC1-201ENST00000288976 EMP3P54852 163 aa8.06□□□□□ -1.12
PTPDC1-201ENST00000288976 AQP5P55064 265 aa8.06□□□□□ -1.12
PTPDC1-201ENST00000288976 SLBPQ14493 270 aaKnown RBP eCLIP8.06□□□□□ -1.12
PTPDC1-201ENST00000288976 GSTA3Q16772 222 aa8.06□□□□□ -1.12
PTPDC1-201ENST00000288976 FGD3Q5JSP0 725 aa8.06□□□□□ -1.12
PTPDC1-201ENST00000288976 FCRL6Q6DN72 434 aa8.06□□□□□ -1.12
PTPDC1-201ENST00000288976 SUSD1Q6UWL2 747 aa8.06□□□□□ -1.12
PTPDC1-201ENST00000288976 RPS27LQ71UM5 84 aaKnown RBP8.06□□□□□ -1.12
PTPDC1-201ENST00000288976 LNX2Q8N448 690 aa8.06□□□□□ -1.12
PTPDC1-201ENST00000288976 RNF148Q8N7C7 305 aa8.06□□□□□ -1.12
PTPDC1-201ENST00000288976 SCAIQ8N9R8 606 aa8.06□□□□□ -1.12
PTPDC1-201ENST00000288976 ESAMQ96AP7 390 aa8.06□□□□□ -1.12
PTPDC1-201ENST00000288976 CCDC74AQ96AQ1 378 aa8.06□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms