RNA–Protein interactions for RNA: ENST00000288344.14

HMGN1-201, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 2

Gene HMGN1, Length 1,303 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-201ENST00000288344 SLC25A18Q9H1K4 315 aa8.66□□□□□ -1.02
HMGN1-201ENST00000288344 CNOT10Q9H9A5 744 aaKnown RBP8.66□□□□□ -1.02
HMGN1-201ENST00000288344 CLK4Q9HAZ1 481 aaKnown RBP8.66□□□□□ -1.02
HMGN1-201ENST00000288344 PRDM7Q9NQW5 492 aa8.66□□□□□ -1.02
HMGN1-201ENST00000288344 SEMA3GQ9NS98 782 aa8.66□□□□□ -1.02
HMGN1-201ENST00000288344 P4HTMQ9NXG6 502 aa8.66□□□□□ -1.02
HMGN1-201ENST00000288344 PSD3Q9NYI0 1048 aa8.66□□□□□ -1.02
HMGN1-201ENST00000288344 TMEM216Q9P0N5 145 aa8.66□□□□□ -1.02
HMGN1-201ENST00000288344 ZNF282Q9UDV7 671 aaPredicted RBP8.66□□□□□ -1.02
HMGN1-201ENST00000288344 EMCNQ9ULC0 261 aa8.66□□□□□ -1.02
HMGN1-201ENST00000288344 RNF112Q9ULX5 631 aa8.66□□□□□ -1.02
HMGN1-201ENST00000288344 EXOC1LA0A1B0GW35 172 aa8.65□□□□□ -1.02
HMGN1-201ENST00000288344 OR2W5A6NFC9 320 aa8.65□□□□□ -1.02
HMGN1-201ENST00000288344 STX16-NPEPL1H3BU86 382 aa8.65□□□□□ -1.02
HMGN1-201ENST00000288344 SGK494L7N484 410 aa8.65□□□□□ -1.02
HMGN1-201ENST00000288344 AGPSO00116 658 aa8.65□□□□□ -1.02
HMGN1-201ENST00000288344 PPP6CO00743 305 aa8.65□□□□□ -1.02
HMGN1-201ENST00000288344 STX16O14662 325 aa8.65□□□□□ -1.02
HMGN1-201ENST00000288344 FFAR3O14843 346 aa8.65□□□□□ -1.02
HMGN1-201ENST00000288344 GPR42O15529 346 aa8.65□□□□□ -1.02
HMGN1-201ENST00000288344 SUV39H1O43463 412 aa8.65□□□□□ -1.02
HMGN1-201ENST00000288344 SLU7O95391 586 aaKnown RBP8.65□□□□□ -1.02
HMGN1-201ENST00000288344 CYC1P08574 325 aa8.65□□□□□ -1.02
HMGN1-201ENST00000288344 RPS17P08708 135 aaKnown RBP8.65□□□□□ -1.02
HMGN1-201ENST00000288344 RBP1P09455 135 aa8.65□□□□□ -1.02
HMGN1-201ENST00000288344 SFTPCP11686 197 aa8.65□□□□□ -1.02
HMGN1-201ENST00000288344 GSTM2P28161 218 aa8.65□□□□□ -1.02
HMGN1-201ENST00000288344 HSD17B3P37058 310 aa8.65□□□□□ -1.02
HMGN1-201ENST00000288344 SLC18A2Q05940 514 aa8.65□□□□□ -1.02
HMGN1-201ENST00000288344 RUNX2Q13950 521 aa8.65□□□□□ -1.02
HMGN1-201ENST00000288344 PDK4Q16654 411 aa8.65□□□□□ -1.02
HMGN1-201ENST00000288344 TEX35Q5T0J7 233 aa8.65□□□□□ -1.02
HMGN1-201ENST00000288344 IGFL2Q6UWQ7 119 aa8.65□□□□□ -1.02
HMGN1-201ENST00000288344 TRIM46Q7Z4K8 759 aa8.65□□□□□ -1.02
HMGN1-201ENST00000288344 ADCK2Q7Z695 626 aa8.65□□□□□ -1.02
HMGN1-201ENST00000288344 TMPRSS11BQ86T26 416 aa8.65□□□□□ -1.02
HMGN1-201ENST00000288344 LCA5Q86VQ0 697 aa8.65□□□□□ -1.02
HMGN1-201ENST00000288344 LINC00528Q8N1L1 170 aa8.65□□□□□ -1.02
HMGN1-201ENST00000288344 MREGQ8N565 214 aa8.65□□□□□ -1.02
HMGN1-201ENST00000288344 TRPV3Q8NET8 790 aa8.65□□□□□ -1.02
HMGN1-201ENST00000288344 FDCSPQ8NFU4 85 aa8.65□□□□□ -1.02
HMGN1-201ENST00000288344 OR7G3Q8NG95 312 aa8.65□□□□□ -1.02
HMGN1-201ENST00000288344 OR5T3Q8NGG3 340 aa8.65□□□□□ -1.02
HMGN1-201ENST00000288344 OR51Q1Q8NH59 317 aa8.65□□□□□ -1.02
HMGN1-201ENST00000288344 WDR20Q8TBZ3 569 aa8.65□□□□□ -1.02
HMGN1-201ENST00000288344 ACMSDQ8TDX5 336 aa8.65□□□□□ -1.02
HMGN1-201ENST00000288344 CAVIN3Q969G5 261 aa8.65□□□□□ -1.02
HMGN1-201ENST00000288344 PTCD3Q96EY7 689 aaKnown RBP8.65□□□□□ -1.02
HMGN1-201ENST00000288344 MMABQ96EY8 250 aaPredicted RBP8.65□□□□□ -1.02
HMGN1-201ENST00000288344 IP6K3Q96PC2 410 aa8.65□□□□□ -1.02
HMGN1-201ENST00000288344 MRPL57Q9BQC6 102 aaKnown RBP8.65□□□□□ -1.02
HMGN1-201ENST00000288344 NTMT1Q9BV86 223 aa8.65□□□□□ -1.02
HMGN1-201ENST00000288344 ZNF717Q9BY31 904 aaPredicted RBP8.65□□□□□ -1.02
HMGN1-201ENST00000288344 PARD6BQ9BYG5 372 aa8.65□□□□□ -1.02
HMGN1-201ENST00000288344 SLC7A5P2Q9GIP4 190 aa8.65□□□□□ -1.02
HMGN1-201ENST00000288344 VPS11Q9H270 941 aa8.65□□□□□ -1.02
HMGN1-201ENST00000288344 SOX17Q9H6I2 414 aaPredicted RBP8.65□□□□□ -1.02
HMGN1-201ENST00000288344 ZNF552Q9H707 407 aaPredicted RBP8.65□□□□□ -1.02
HMGN1-201ENST00000288344 MKKSQ9NPJ1 570 aaPredicted RBP8.65□□□□□ -1.02
HMGN1-201ENST00000288344 CD274Q9NZQ7 290 aa8.65□□□□□ -1.02
HMGN1-201ENST00000288344 KCMF1Q9P0J7 381 aa8.65□□□□□ -1.02
HMGN1-201ENST00000288344 NDOR1Q9UHB4 597 aa8.65□□□□□ -1.02
HMGN1-201ENST00000288344 NXT1Q9UKK6 140 aaKnown RBP8.65□□□□□ -1.02
HMGN1-201ENST00000288344 PADI2Q9Y2J8 665 aa8.65□□□□□ -1.02
HMGN1-201ENST00000288344 NAALAD2Q9Y3Q0 740 aa8.65□□□□□ -1.02
HMGN1-201ENST00000288344 DYRK1BQ9Y463 629 aa8.65□□□□□ -1.02
HMGN1-201ENST00000288344 IGKV3D-11A0A0A0MRZ8 115 aa8.64□□□□□ -1.03
HMGN1-201ENST00000288344 ARGFXA6NJG6 315 aa8.64□□□□□ -1.03
HMGN1-201ENST00000288344 SYCE1LA8MT33 242 aa8.64□□□□□ -1.03
HMGN1-201ENST00000288344 IDSB3KWA1 339 aa8.64□□□□□ -1.03
HMGN1-201ENST00000288344 B8ZZF3 427 aa8.64□□□□□ -1.03
HMGN1-201ENST00000288344 H0YIV9 168 aa8.64□□□□□ -1.03
HMGN1-201ENST00000288344 NDUFS4O43181 175 aa8.64□□□□□ -1.03
HMGN1-201ENST00000288344 CHST10O43529 356 aa8.64□□□□□ -1.03
HMGN1-201ENST00000288344 DLX3O60479 287 aa8.64□□□□□ -1.03
HMGN1-201ENST00000288344 UGDHO60701 494 aa8.64□□□□□ -1.03
HMGN1-201ENST00000288344 KLHL18O94889 574 aa8.64□□□□□ -1.03
HMGN1-201ENST00000288344 SCELO95171 688 aa8.64□□□□□ -1.03
HMGN1-201ENST00000288344 COX6A1P12074 109 aa8.64□□□□□ -1.03
HMGN1-201ENST00000288344 ALOX12P18054 663 aa8.64□□□□□ -1.03
HMGN1-201ENST00000288344 IL1RNP18510 177 aa8.64□□□□□ -1.03
HMGN1-201ENST00000288344 FBLP22087 321 aaKnown RBP8.64□□□□□ -1.03
HMGN1-201ENST00000288344 CXCR2P25025 360 aa8.64□□□□□ -1.03
HMGN1-201ENST00000288344 GRK3P35626 688 aa8.64□□□□□ -1.03
HMGN1-201ENST00000288344 FOLR3P41439 243 aa8.64□□□□□ -1.03
HMGN1-201ENST00000288344 RHAGQ02094 409 aa8.64□□□□□ -1.03
HMGN1-201ENST00000288344 CHAF1BQ13112 559 aa8.64□□□□□ -1.03
HMGN1-201ENST00000288344 CHIT1Q13231 466 aa8.64□□□□□ -1.03
HMGN1-201ENST00000288344 SLBPQ14493 270 aaKnown RBP eCLIP8.64□□□□□ -1.03
HMGN1-201ENST00000288344 HERC3Q15034 1050 aa8.64□□□□□ -1.03
HMGN1-201ENST00000288344 PCOLCEQ15113 449 aa8.64□□□□□ -1.03
HMGN1-201ENST00000288344 NDUFA9Q16795 377 aa8.64□□□□□ -1.03
HMGN1-201ENST00000288344 PFKFB4Q16877 469 aa8.64□□□□□ -1.03
HMGN1-201ENST00000288344 ERCC6LQ2NKX8 1250 aa8.64□□□□□ -1.03
HMGN1-201ENST00000288344 TAF1BQ53T94 588 aaPredicted RBP8.64□□□□□ -1.03
HMGN1-201ENST00000288344 TNFAIP8L3Q5GJ75 292 aa8.64□□□□□ -1.03
HMGN1-201ENST00000288344 CRB2Q5IJ48 1285 aa8.64□□□□□ -1.03
HMGN1-201ENST00000288344 ABHD17CQ6PCB6 329 aa8.64□□□□□ -1.03
HMGN1-201ENST00000288344 IGFL3Q6UXB1 125 aa8.64□□□□□ -1.03
HMGN1-201ENST00000288344 SHISA6Q6ZSJ9 500 aa8.64□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 51.8 ms