RNA–Protein interactions for RNA: ENST00000287936.8

HMGCR-201, Transcript of 3-hydroxy-3-methylglutaryl-CoA reductase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HMGCR, Length 4,585 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCR-201ENST00000287936 PPIL1Q9Y3C6 166 aa9.66□□□□□ -0.86
HMGCR-201ENST00000287936 CCL27Q9Y4X3 112 aa9.66□□□□□ -0.86
HMGCR-201ENST00000287936 CROCCQ5TZA2 2017 aa9.65□□□□□ -0.86
HMGCR-201ENST00000287936 TSPAN19P0C672 248 aa9.65□□□□□ -0.86
HMGCR-201ENST00000287936 EXOC3L2Q2M3D2 409 aa9.65□□□□□ -0.86
HMGCR-201ENST00000287936 SDE2Q6IQ49 451 aa9.65□□□□□ -0.86
HMGCR-201ENST00000287936 MSRB3Q8IXL7 192 aa9.65□□□□□ -0.86
HMGCR-201ENST00000287936 C2orf73Q8N5S3 287 aaPredicted RBP9.65□□□□□ -0.86
HMGCR-201ENST00000287936 ZNF366Q8N895 744 aa9.65□□□□□ -0.86
HMGCR-201ENST00000287936 VANGL1Q8TAA9 524 aaPredicted RBP9.65□□□□□ -0.86
HMGCR-201ENST00000287936 HCAR2Q8TDS4 363 aa9.65□□□□□ -0.86
HMGCR-201ENST00000287936 C16orf78Q8WTQ4 265 aa9.65□□□□□ -0.86
HMGCR-201ENST00000287936 OR5P2Q8WZ92 322 aa9.65□□□□□ -0.86
HMGCR-201ENST00000287936 SLC35G5Q96KT7 338 aa9.65□□□□□ -0.86
HMGCR-201ENST00000287936 ALPK1Q96QP1 1244 aa9.65□□□□□ -0.86
HMGCR-201ENST00000287936 FEVQ99581 238 aa9.65□□□□□ -0.86
HMGCR-201ENST00000287936 TMEM106CQ9BVX2 250 aa9.65□□□□□ -0.86
HMGCR-201ENST00000287936 SSR3Q9UNL2 185 aa9.65□□□□□ -0.86
HMGCR-201ENST00000287936 CFL2Q9Y281 166 aa9.65□□□□□ -0.86
HMGCR-201ENST00000287936 TLL1O43897 1013 aa9.65□□□□□ -0.86
HMGCR-201ENST00000287936 VEGFDO43915 354 aa9.65□□□□□ -0.86
HMGCR-201ENST00000287936 HTR1BP28222 390 aa9.65□□□□□ -0.86
HMGCR-201ENST00000287936 OPRL1P41146 370 aa9.65□□□□□ -0.86
HMGCR-201ENST00000287936 GANABQ14697 944 aaKnown RBP9.65□□□□□ -0.86
HMGCR-201ENST00000287936 KDM4DQ6B0I6 523 aa9.65□□□□□ -0.86
HMGCR-201ENST00000287936 TUBA3EQ6PEY2 450 aa9.65□□□□□ -0.86
HMGCR-201ENST00000287936 CEACAM20Q6UY09 585 aa9.65□□□□□ -0.86
HMGCR-201ENST00000287936 DCDC5Q6ZRR9 648 aa9.65□□□□□ -0.86
HMGCR-201ENST00000287936 ZNF367Q7RTV3 350 aa9.65□□□□□ -0.86
HMGCR-201ENST00000287936 PHF6Q8IWS0 365 aaKnown RBP eCLIP9.65□□□□□ -0.86
HMGCR-201ENST00000287936 SLC34A3Q8N130 599 aa9.65□□□□□ -0.86
HMGCR-201ENST00000287936 DENND6BQ8NEG7 585 aa9.65□□□□□ -0.86
HMGCR-201ENST00000287936 SMPDL3AQ92484 453 aa9.65□□□□□ -0.86
HMGCR-201ENST00000287936 SMG7Q92540 1137 aaKnown RBP9.65□□□□□ -0.86
HMGCR-201ENST00000287936 TBC1D20Q96BZ9 403 aa9.65□□□□□ -0.86
HMGCR-201ENST00000287936 SH3YL1Q96HL8 342 aaPredicted RBP9.65□□□□□ -0.86
HMGCR-201ENST00000287936 PHPT1Q9NRX4 125 aaPredicted RBP9.65□□□□□ -0.86
HMGCR-201ENST00000287936 TSC22D4Q9Y3Q8 395 aa9.65□□□□□ -0.86
HMGCR-201ENST00000287936 IGLV3-16A0A075B6K0 115 aa9.65□□□□□ -0.86
HMGCR-201ENST00000287936 SERTM1A2A2V5 107 aa9.65□□□□□ -0.86
HMGCR-201ENST00000287936 WASH3PC4AMC7 463 aa9.65□□□□□ -0.86
HMGCR-201ENST00000287936 LOC110117498-PIK3R3F6TDL0 507 aa9.65□□□□□ -0.86
HMGCR-201ENST00000287936 HNRNPA1P09651 372 aaKnown RBP eCLIP9.65□□□□□ -0.86
HMGCR-201ENST00000287936 ETFAP13804 333 aa9.65□□□□□ -0.86
HMGCR-201ENST00000287936 CTSCP53634 463 aa9.65□□□□□ -0.86
HMGCR-201ENST00000287936 HSPB3Q12988 150 aa9.65□□□□□ -0.86
HMGCR-201ENST00000287936 SPCS2Q15005 226 aa9.65□□□□□ -0.86
HMGCR-201ENST00000287936 TNFAIP8L2Q6P589 184 aaPredicted RBP9.65□□□□□ -0.86
HMGCR-201ENST00000287936 RTL10Q7L3V2 364 aa9.65□□□□□ -0.86
HMGCR-201ENST00000287936 LRRTM4Q86VH4 590 aa9.65□□□□□ -0.86
HMGCR-201ENST00000287936 SLC22A15Q8IZD6 547 aa9.65□□□□□ -0.86
HMGCR-201ENST00000287936 AQP11Q8NBQ7 271 aa9.65□□□□□ -0.86
HMGCR-201ENST00000287936 PIK3R3Q92569 461 aa9.65□□□□□ -0.86
HMGCR-201ENST00000287936 SLC38A2Q96QD8 506 aa9.65□□□□□ -0.86
HMGCR-201ENST00000287936 TRIM39Q9HCM9 518 aa9.65□□□□□ -0.86
HMGCR-201ENST00000287936 MYNNQ9NPC7 610 aa9.65□□□□□ -0.86
HMGCR-201ENST00000287936 DMRT3Q9NQL9 472 aa9.65□□□□□ -0.86
HMGCR-201ENST00000287936 GABARAPO95166 117 aa9.65□□□□□ -0.87
HMGCR-201ENST00000287936 GBAP04062 536 aa9.65□□□□□ -0.87
HMGCR-201ENST00000287936 IL3P08700 152 aa9.65□□□□□ -0.87
HMGCR-201ENST00000287936 RHCEP18577 417 aa9.65□□□□□ -0.87
HMGCR-201ENST00000287936 PSMA1P25786 263 aaKnown RBP9.65□□□□□ -0.87
HMGCR-201ENST00000287936 GGT2P36268 569 aa9.65□□□□□ -0.87
HMGCR-201ENST00000287936 PRKAG1P54619 331 aa9.65□□□□□ -0.87
HMGCR-201ENST00000287936 DEFB103AP81534 67 aa9.65□□□□□ -0.87
HMGCR-201ENST00000287936 VLDLRP98155 873 aa9.65□□□□□ -0.87
HMGCR-201ENST00000287936 NKG7Q16617 165 aa9.65□□□□□ -0.87
HMGCR-201ENST00000287936 ZNF697Q5TEC3 545 aa9.65□□□□□ -0.87
HMGCR-201ENST00000287936 LIPIQ6XZB0 460 aa9.65□□□□□ -0.87
HMGCR-201ENST00000287936 IGFN1Q86VF2 1251 aa9.65□□□□□ -0.87
HMGCR-201ENST00000287936 LINC00471Q8N535 108 aa9.65□□□□□ -0.87
HMGCR-201ENST00000287936 TTLQ8NG68 377 aa9.65□□□□□ -0.87
HMGCR-201ENST00000287936 OR56A3Q8NH54 315 aa9.65□□□□□ -0.87
HMGCR-201ENST00000287936 TFGQ92734 400 aaPredicted RBP9.65□□□□□ -0.87
HMGCR-201ENST00000287936 RGMAQ96B86 450 aa9.65□□□□□ -0.87
HMGCR-201ENST00000287936 ZNF300Q96RE9 604 aaPredicted RBP9.65□□□□□ -0.87
HMGCR-201ENST00000287936 FAM129BQ96TA1 746 aa9.65□□□□□ -0.87
HMGCR-201ENST00000287936 MYOCQ99972 504 aa9.65□□□□□ -0.87
HMGCR-201ENST00000287936 UCK2Q9BZX2 261 aa9.65□□□□□ -0.87
HMGCR-201ENST00000287936 ZBP1Q9H171 429 aa9.65□□□□□ -0.87
HMGCR-201ENST00000287936 SPATA6Q9NWH7 488 aaPredicted RBP9.65□□□□□ -0.87
HMGCR-201ENST00000287936 ZSCAN32Q9NX65 697 aa9.65□□□□□ -0.87
HMGCR-201ENST00000287936 MGAT4BQ9UQ53 548 aa9.65□□□□□ -0.87
HMGCR-201ENST00000287936 RPL36Q9Y3U8 105 aaKnown RBP9.65□□□□□ -0.87
HMGCR-201ENST00000287936 TLR4O00206 839 aa9.64□□□□□ -0.87
HMGCR-201ENST00000287936 OR1F1O43749 312 aa9.64□□□□□ -0.87
HMGCR-201ENST00000287936 EIF2S1P05198 315 aaKnown RBP9.64□□□□□ -0.87
HMGCR-201ENST00000287936 H1F0P07305 194 aaKnown RBP9.64□□□□□ -0.87
HMGCR-201ENST00000287936 POLR2IP36954 125 aaKnown RBP9.64□□□□□ -0.87
HMGCR-201ENST00000287936 OR1E2P47887 323 aa9.64□□□□□ -0.87
HMGCR-201ENST00000287936 KHKP50053 298 aa9.64□□□□□ -0.87
HMGCR-201ENST00000287936 NUDT6P53370 316 aa9.64□□□□□ -0.87
HMGCR-201ENST00000287936 CTU2Q2VPK5 515 aaKnown RBP9.64□□□□□ -0.87
HMGCR-201ENST00000287936 PYCR3Q53H96 274 aa9.64□□□□□ -0.87
HMGCR-201ENST00000287936 PIWIL3Q7Z3Z3 882 aaKnown RBP9.64□□□□□ -0.87
HMGCR-201ENST00000287936 TMCO2Q7Z6W1 182 aaPredicted RBP9.64□□□□□ -0.87
HMGCR-201ENST00000287936 GJD3Q8N144 294 aa9.64□□□□□ -0.87
HMGCR-201ENST00000287936 SRFBP1Q8NEF9 429 aaKnown RBP9.64□□□□□ -0.87
HMGCR-201ENST00000287936 ZNF675Q8TD23 568 aa9.64□□□□□ -0.87
HMGCR-201ENST00000287936 XAGE5Q8WWM1 108 aa9.64□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms