RNA–Protein interactions for RNA: ENST00000279452.10

CD44-204, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 3

Gene CD44, Length 862 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-204ENST00000279452 CHST10O43529 356 aa6.18□□□□□ -1.42
CD44-204ENST00000279452 PLIN3O60664 434 aa6.18□□□□□ -1.42
CD44-204ENST00000279452 UGDHO60701 494 aa6.18□□□□□ -1.42
CD44-204ENST00000279452 JRKO75564 520 aa6.18□□□□□ -1.42
CD44-204ENST00000279452 WFS1O76024 890 aa6.18□□□□□ -1.42
CD44-204ENST00000279452 OR4F21O95013 312 aa6.18□□□□□ -1.42
CD44-204ENST00000279452 MLYCDO95822 493 aa6.18□□□□□ -1.42
CD44-204ENST00000279452 IGHEP01854 428 aa6.18□□□□□ -1.42
CD44-204ENST00000279452 PROCP04070 461 aa6.18□□□□□ -1.42
CD44-204ENST00000279452 UMODP07911 640 aa6.18□□□□□ -1.42
CD44-204ENST00000279452 SBK3P0C264 359 aa6.18□□□□□ -1.42
CD44-204ENST00000279452 C8orf89P0DMQ9 161 aa6.18□□□□□ -1.42
CD44-204ENST00000279452 NEFHP12036 1026 aa6.18□□□□□ -1.42
CD44-204ENST00000279452 ITGA3P26006 1051 aa6.18□□□□□ -1.42
CD44-204ENST00000279452 NEK2P51955 445 aa6.18□□□□□ -1.42
CD44-204ENST00000279452 PRKAA2P54646 552 aa6.18□□□□□ -1.42
CD44-204ENST00000279452 MTTPP55157 894 aa6.18□□□□□ -1.42
CD44-204ENST00000279452 RPS13P62277 151 aaKnown RBP6.18□□□□□ -1.42
CD44-204ENST00000279452 CLCQ05315 142 aa6.18□□□□□ -1.42
CD44-204ENST00000279452 IFT88Q13099 833 aa6.18□□□□□ -1.42
CD44-204ENST00000279452 KCNAB2Q13303 367 aa6.18□□□□□ -1.42
CD44-204ENST00000279452 AP5B1Q2VPB7 878 aa6.18□□□□□ -1.42
CD44-204ENST00000279452 TUBB8Q3ZCM7 444 aa6.18□□□□□ -1.42
CD44-204ENST00000279452 ZNF678Q5SXM1 525 aa6.18□□□□□ -1.42
CD44-204ENST00000279452 KHDRBS2Q5VWX1 349 aaKnown RBP6.18□□□□□ -1.42
CD44-204ENST00000279452 METTL2BQ6P1Q9 378 aaKnown RBP6.18□□□□□ -1.42
CD44-204ENST00000279452 GPRIN3Q6ZVF9 776 aa6.18□□□□□ -1.42
CD44-204ENST00000279452 VN1R5Q7Z5H4 357 aa6.18□□□□□ -1.42
CD44-204ENST00000279452 PPP1R32Q7Z5V6 425 aa6.18□□□□□ -1.42
CD44-204ENST00000279452 CROCCP2Q86T23 111 aa6.18□□□□□ -1.42
CD44-204ENST00000279452 LAPTM4BQ86VI4 370 aa6.18□□□□□ -1.42
CD44-204ENST00000279452 ARHGEF39Q8N4T4 335 aa6.18□□□□□ -1.42
CD44-204ENST00000279452 EFCAB3Q8N7B9 438 aa6.18□□□□□ -1.42
CD44-204ENST00000279452 CDYL2Q8N8U2 506 aa6.18□□□□□ -1.42
CD44-204ENST00000279452 FAM47BQ8NA70 645 aa6.18□□□□□ -1.42
CD44-204ENST00000279452 SRFBP1Q8NEF9 429 aaKnown RBP6.18□□□□□ -1.42
CD44-204ENST00000279452 OR2L5Q8NG80 312 aa6.18□□□□□ -1.42
CD44-204ENST00000279452 OR7G3Q8NG95 312 aa6.18□□□□□ -1.42
CD44-204ENST00000279452 HUS1BQ8NHY5 278 aa6.18□□□□□ -1.42
CD44-204ENST00000279452 PPP1R14CQ8TAE6 165 aa6.18□□□□□ -1.42
CD44-204ENST00000279452 C9orf43Q8TAL5 461 aaPredicted RBP6.18□□□□□ -1.42
CD44-204ENST00000279452 RDH11Q8TC12 318 aa6.18□□□□□ -1.42
CD44-204ENST00000279452 CREB3L4Q8TEY5 395 aa6.18□□□□□ -1.42
CD44-204ENST00000279452 ZNF483Q8TF39 744 aaPredicted RBP6.18□□□□□ -1.42
CD44-204ENST00000279452 ZNF473Q8WTR7 871 aaKnown RBP6.18□□□□□ -1.42
CD44-204ENST00000279452 SNRNP27Q8WVK2 155 aaKnown RBP6.18□□□□□ -1.42
CD44-204ENST00000279452 SELENOMQ8WWX9 145 aa6.18□□□□□ -1.42
CD44-204ENST00000279452 C8orf44Q96CB5 159 aa6.18□□□□□ -1.42
CD44-204ENST00000279452 MS4A6EQ96DS6 147 aa6.18□□□□□ -1.42
CD44-204ENST00000279452 WDR34Q96EX3 536 aa6.18□□□□□ -1.42
CD44-204ENST00000279452 CMTM7Q96FZ5 175 aa6.18□□□□□ -1.42
CD44-204ENST00000279452 SEC16BQ96JE7 1060 aa6.18□□□□□ -1.42
CD44-204ENST00000279452 IP6K3Q96PC2 410 aa6.18□□□□□ -1.42
CD44-204ENST00000279452 ZIM3Q96PE6 472 aa6.18□□□□□ -1.42
CD44-204ENST00000279452 KCNC2Q96PR1 638 aa6.18□□□□□ -1.42
CD44-204ENST00000279452 SERINC2Q96SA4 455 aa6.18□□□□□ -1.42
CD44-204ENST00000279452 HBEGFQ99075 208 aa6.18□□□□□ -1.42
CD44-204ENST00000279452 SARGQ9BW04 601 aa6.18□□□□□ -1.42
CD44-204ENST00000279452 SORBS1Q9BX66 1292 aaKnown RBP6.18□□□□□ -1.42
CD44-204ENST00000279452 MS4A8Q9BY19 250 aa6.18□□□□□ -1.42
CD44-204ENST00000279452 SHCBP1LQ9BZQ2 653 aa6.18□□□□□ -1.42
CD44-204ENST00000279452 ING2Q9H160 280 aa6.18□□□□□ -1.42
CD44-204ENST00000279452 STMN4Q9H169 189 aaPredicted RBP6.18□□□□□ -1.42
CD44-204ENST00000279452 SLC26A1Q9H2B4 701 aa6.18□□□□□ -1.42
CD44-204ENST00000279452 OR51B5Q9H339 312 aa6.18□□□□□ -1.42
CD44-204ENST00000279452 ZNF160Q9HCG1 818 aa6.18□□□□□ -1.42
CD44-204ENST00000279452 MID1IP1Q9NPA3 183 aa6.18□□□□□ -1.42
CD44-204ENST00000279452 KCNK9Q9NPC2 374 aa6.18□□□□□ -1.42
CD44-204ENST00000279452 DMRT3Q9NQL9 472 aa6.18□□□□□ -1.42
CD44-204ENST00000279452 ZNF71Q9NQZ8 489 aaPredicted RBP6.18□□□□□ -1.42
CD44-204ENST00000279452 P4HTMQ9NXG6 502 aa6.18□□□□□ -1.42
CD44-204ENST00000279452 SENP1Q9P0U3 644 aa6.18□□□□□ -1.42
CD44-204ENST00000279452 C19orf25Q9UFG5 118 aaPredicted RBP6.18□□□□□ -1.42
CD44-204ENST00000279452 ADGRE2Q9UHX3 823 aa6.18□□□□□ -1.42
CD44-204ENST00000279452 FBXL4Q9UKA2 621 aa6.18□□□□□ -1.42
CD44-204ENST00000279452 EMCNQ9ULC0 261 aa6.18□□□□□ -1.42
CD44-204ENST00000279452 ZNF490Q9ULM2 529 aaPredicted RBP6.18□□□□□ -1.42
CD44-204ENST00000279452 STK38LQ9Y2H1 464 aa6.18□□□□□ -1.42
CD44-204ENST00000279452 FIS1Q9Y3D6 152 aa6.18□□□□□ -1.42
CD44-204ENST00000279452 KCNMB2Q9Y691 235 aa6.18□□□□□ -1.42
CD44-204ENST00000279452 SPACA6W5XKT8 324 aa6.18□□□□□ -1.42
CD44-204ENST00000279452 AKAP13Q12802 2813 aa6.18□□□□□ -1.42
CD44-204ENST00000279452 NSG1A0A0A6YYJ2 146 aa6.17□□□□□ -1.42
CD44-204ENST00000279452 IGHV3-20A0A0C4DH32 117 aa6.17□□□□□ -1.42
CD44-204ENST00000279452 ARHGAP10A1A4S6 786 aa6.17□□□□□ -1.42
CD44-204ENST00000279452 OR2W5A6NFC9 320 aa6.17□□□□□ -1.42
CD44-204ENST00000279452 VSTM2BA6NLU5 285 aa6.17□□□□□ -1.42
CD44-204ENST00000279452 MAGEB17A8MXT2 336 aa6.17□□□□□ -1.42
CD44-204ENST00000279452 G3V2L1 256 aa6.17□□□□□ -1.42
CD44-204ENST00000279452 H0YIV9 168 aa6.17□□□□□ -1.42
CD44-204ENST00000279452 AGPSO00116 658 aa6.17□□□□□ -1.42
CD44-204ENST00000279452 PPP6CO00743 305 aa6.17□□□□□ -1.42
CD44-204ENST00000279452 ATXN7O15265 892 aaPredicted RBP6.17□□□□□ -1.42
CD44-204ENST00000279452 SEC24DO94855 1032 aaPredicted RBP6.17□□□□□ -1.42
CD44-204ENST00000279452 BMP10O95393 424 aa6.17□□□□□ -1.42
CD44-204ENST00000279452 KRT6AP02538 564 aa6.17□□□□□ -1.42
CD44-204ENST00000279452 KRT6BP04259 564 aa6.17□□□□□ -1.42
CD44-204ENST00000279452 FHP07954 510 aa6.17□□□□□ -1.42
CD44-204ENST00000279452 RNH1P13489 461 aaKnown RBP6.17□□□□□ -1.42
CD44-204ENST00000279452 IMPDH1P20839 514 aa6.17□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms