RNA–Protein interactions for RNA: ENST00000278385.10

CD44-202, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 3

Gene CD44, Length 697 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-202ENST00000278385 MISPQ8IVT2 679 aa4.37□□□□□ -1.71
CD44-202ENST00000278385 C12orf56Q8IXR9 622 aa4.37□□□□□ -1.71
CD44-202ENST00000278385 KLHDC8AQ8IYD2 350 aa4.37□□□□□ -1.71
CD44-202ENST00000278385 ZDHHC23Q8IYP9 409 aa4.37□□□□□ -1.71
CD44-202ENST00000278385 GHDCQ8N2G8 530 aa4.37□□□□□ -1.71
CD44-202ENST00000278385 SLC44A3Q8N4M1 653 aa4.37□□□□□ -1.71
CD44-202ENST00000278385 BCORP1Q8N888 145 aa4.37□□□□□ -1.71
CD44-202ENST00000278385 NECAB1Q8N987 351 aa4.37□□□□□ -1.71
CD44-202ENST00000278385 B3GALNT2Q8NCR0 500 aa4.37□□□□□ -1.71
CD44-202ENST00000278385 C7orf57Q8NEG2 295 aa4.37□□□□□ -1.71
CD44-202ENST00000278385 DNAAF1Q8NEP3 725 aa4.37□□□□□ -1.71
CD44-202ENST00000278385 PAQR8Q8TEZ7 354 aa4.37□□□□□ -1.71
CD44-202ENST00000278385 PDCD6IPQ8WUM4 868 aaKnown RBP4.37□□□□□ -1.71
CD44-202ENST00000278385 MITD1Q8WV92 249 aa4.37□□□□□ -1.71
CD44-202ENST00000278385 ESR2Q92731 530 aa4.37□□□□□ -1.71
CD44-202ENST00000278385 RFKQ969G6 155 aa4.37□□□□□ -1.71
CD44-202ENST00000278385 ULK4Q96C45 1275 aa4.37□□□□□ -1.71
CD44-202ENST00000278385 MUS81Q96NY9 551 aa4.37□□□□□ -1.71
CD44-202ENST00000278385 BTBD9Q96Q07 612 aa4.37□□□□□ -1.71
CD44-202ENST00000278385 COQ7Q99807 217 aa4.37□□□□□ -1.71
CD44-202ENST00000278385 TMEM47Q9BQJ4 181 aa4.37□□□□□ -1.71
CD44-202ENST00000278385 NUP58Q9BVL2 599 aa4.37□□□□□ -1.71
CD44-202ENST00000278385 C1QTNF5Q9BXJ0 243 aa4.37□□□□□ -1.71
CD44-202ENST00000278385 RHBGQ9H310 441 aa4.37□□□□□ -1.71
CD44-202ENST00000278385 FN3KQ9H479 309 aa4.37□□□□□ -1.71
CD44-202ENST00000278385 TOR3AQ9H497 397 aa4.37□□□□□ -1.71
CD44-202ENST00000278385 TMEM231Q9H6L2 316 aa4.37□□□□□ -1.71
CD44-202ENST00000278385 ACTR8Q9H981 624 aa4.37□□□□□ -1.71
CD44-202ENST00000278385 ROPN1Q9HAT0 212 aaPredicted RBP4.37□□□□□ -1.71
CD44-202ENST00000278385 UPF2Q9HAU5 1272 aaKnown RBP4.37□□□□□ -1.71
CD44-202ENST00000278385 CYP3A43Q9HB55 503 aa4.37□□□□□ -1.71
CD44-202ENST00000278385 LY9Q9HBG7 655 aa4.37□□□□□ -1.71
CD44-202ENST00000278385 NEK6Q9HC98 313 aa4.37□□□□□ -1.71
CD44-202ENST00000278385 RAVER2Q9HCJ3 691 aaKnown RBP4.37□□□□□ -1.71
CD44-202ENST00000278385 MMP25Q9NPA2 562 aa4.37□□□□□ -1.71
CD44-202ENST00000278385 MKKSQ9NPJ1 570 aaPredicted RBP4.37□□□□□ -1.71
CD44-202ENST00000278385 FAM207AQ9NSI2 230 aaPredicted RBP4.37□□□□□ -1.71
CD44-202ENST00000278385 GTSE1Q9NYZ3 720 aa4.37□□□□□ -1.71
CD44-202ENST00000278385 STX18Q9P2W9 335 aaKnown RBP4.37□□□□□ -1.71
CD44-202ENST00000278385 WNT16Q9UBV4 365 aa4.37□□□□□ -1.71
CD44-202ENST00000278385 CRLS1Q9UJA2 301 aa4.37□□□□□ -1.71
CD44-202ENST00000278385 ING1Q9UK53 422 aaPredicted RBP4.37□□□□□ -1.71
CD44-202ENST00000278385 TMEM184BQ9Y519 407 aaPredicted RBP4.37□□□□□ -1.71
CD44-202ENST00000278385 RIPK3Q9Y572 518 aa4.37□□□□□ -1.71
CD44-202ENST00000278385 DYNC1LI1Q9Y6G9 523 aaKnown RBP4.37□□□□□ -1.71
CD44-202ENST00000278385 MAU2Q9Y6X3 613 aa4.37□□□□□ -1.71
CD44-202ENST00000278385 LOC285556D6RIA3 1793 aa4.36□□□□□ -1.71
CD44-202ENST00000278385 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP4.36□□□□□ -1.71
CD44-202ENST00000278385 A0A1W2PS29 197 aa4.36□□□□□ -1.71
CD44-202ENST00000278385 FAM149AA5PLN7 773 aa4.36□□□□□ -1.71
CD44-202ENST00000278385 ASB14A6NK59 587 aa4.36□□□□□ -1.71
CD44-202ENST00000278385 IQCF5A8MTL0 148 aa4.36□□□□□ -1.71
CD44-202ENST00000278385 CLDN4O14493 209 aa4.36□□□□□ -1.71
CD44-202ENST00000278385 KCNAB3O43448 404 aa4.36□□□□□ -1.71
CD44-202ENST00000278385 TGM6O95932 706 aa4.36□□□□□ -1.71
CD44-202ENST00000278385 ICAM1P05362 532 aa4.36□□□□□ -1.71
CD44-202ENST00000278385 FESP07332 822 aa4.36□□□□□ -1.71
CD44-202ENST00000278385 CAPN1P07384 714 aa4.36□□□□□ -1.71
CD44-202ENST00000278385 PLA2G4BP0C869 781 aa4.36□□□□□ -1.71
CD44-202ENST00000278385 SLC2A3P11169 496 aa4.36□□□□□ -1.71
CD44-202ENST00000278385 VPREB1P12018 145 aa4.36□□□□□ -1.71
CD44-202ENST00000278385 AKR1A1P14550 325 aa4.36□□□□□ -1.71
CD44-202ENST00000278385 ZNF18P17022 549 aa4.36□□□□□ -1.71
CD44-202ENST00000278385 TNNI3P19429 210 aa4.36□□□□□ -1.71
CD44-202ENST00000278385 AZGP1P25311 298 aaKnown RBP4.36□□□□□ -1.71
CD44-202ENST00000278385 ITGA3P26006 1051 aa4.36□□□□□ -1.71
CD44-202ENST00000278385 PPIFP30405 207 aaKnown RBP4.36□□□□□ -1.71
CD44-202ENST00000278385 CXCR5P32302 372 aa4.36□□□□□ -1.71
CD44-202ENST00000278385 ALDH3B1P43353 468 aa4.36□□□□□ -1.71
CD44-202ENST00000278385 CEBPDP49716 269 aaPredicted RBP4.36□□□□□ -1.71
CD44-202ENST00000278385 TUBA1BP68363 451 aa4.36□□□□□ -1.71
CD44-202ENST00000278385 FOLH1Q04609 750 aa4.36□□□□□ -1.71
CD44-202ENST00000278385 ARHGAP1Q07960 439 aa4.36□□□□□ -1.71
CD44-202ENST00000278385 HSPB3Q12988 150 aa4.36□□□□□ -1.71
CD44-202ENST00000278385 PRKAA1Q13131 559 aa4.36□□□□□ -1.71
CD44-202ENST00000278385 ZNF177Q13360 481 aaPredicted RBP4.36□□□□□ -1.71
CD44-202ENST00000278385 DYRK1AQ13627 763 aa4.36□□□□□ -1.71
CD44-202ENST00000278385 GNA13Q14344 377 aa4.36□□□□□ -1.71
CD44-202ENST00000278385 PDIA5Q14554 519 aa4.36□□□□□ -1.71
CD44-202ENST00000278385 HLXQ14774 488 aaPredicted RBP4.36□□□□□ -1.71
CD44-202ENST00000278385 SSX2Q16385 188 aa4.36□□□□□ -1.71
CD44-202ENST00000278385 RPE65Q16518 533 aa4.36□□□□□ -1.71
CD44-202ENST00000278385 ZSCAN26Q16670 478 aa4.36□□□□□ -1.71
CD44-202ENST00000278385 CDONQ4KMG0 1287 aa4.36□□□□□ -1.71
CD44-202ENST00000278385 PDLIM3Q53GG5 364 aaPredicted RBP4.36□□□□□ -1.71
CD44-202ENST00000278385 PRAMEF7Q5VXH5 474 aa4.36□□□□□ -1.71
CD44-202ENST00000278385 LRRC66Q68CR7 880 aa4.36□□□□□ -1.71
CD44-202ENST00000278385 TMEM108Q6UXF1 575 aa4.36□□□□□ -1.71
CD44-202ENST00000278385 SLC30A10Q6XR72 485 aa4.36□□□□□ -1.71
CD44-202ENST00000278385 B3GLCTQ6Y288 498 aa4.36□□□□□ -1.71
CD44-202ENST00000278385 SLC39A5Q6ZMH5 540 aa4.36□□□□□ -1.71
CD44-202ENST00000278385 TMEM26Q6ZUK4 368 aa4.36□□□□□ -1.71
CD44-202ENST00000278385 TUBA1AQ71U36 451 aa4.36□□□□□ -1.71
CD44-202ENST00000278385 TECPR1Q7Z6L1 1165 aa4.36□□□□□ -1.71
CD44-202ENST00000278385 CCDC60Q8IWA6 550 aaPredicted RBP4.36□□□□□ -1.71
CD44-202ENST00000278385 KATNAL2Q8IYT4 538 aa4.36□□□□□ -1.71
CD44-202ENST00000278385 UBE2J2Q8N2K1 259 aa4.36□□□□□ -1.71
CD44-202ENST00000278385 GPR137CQ8N3F9 429 aa4.36□□□□□ -1.71
CD44-202ENST00000278385 FBXO39Q8N4B4 442 aa4.36□□□□□ -1.71
CD44-202ENST00000278385 LKAAEAR1Q8TD35 194 aa4.36□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms