RNA–Protein interactions for RNA: ENST00000269137.11

SS18-201, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SS18, Length 1,836 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-201ENST00000269137 C6orf10Q5SRN2 563 aa13.45□□□□□ -0.26
SS18-201ENST00000269137 OR4F3Q6IEY1 312 aa13.45□□□□□ -0.26
SS18-201ENST00000269137 ABHD17CQ6PCB6 329 aa13.45□□□□□ -0.26
SS18-201ENST00000269137 CEP68Q76N32 757 aa13.45□□□□□ -0.26
SS18-201ENST00000269137 ASPGQ86U10 573 aa13.45□□□□□ -0.26
SS18-201ENST00000269137 OR2L5Q8NG80 312 aa13.45□□□□□ -0.26
SS18-201ENST00000269137 OR8J3Q8NGG0 315 aa13.45□□□□□ -0.26
SS18-201ENST00000269137 DNAJB14Q8TBM8 379 aa13.45□□□□□ -0.26
SS18-201ENST00000269137 PIGKQ92643 395 aa13.45□□□□□ -0.26
SS18-201ENST00000269137 KCNC2Q96PR1 638 aa13.45□□□□□ -0.26
SS18-201ENST00000269137 DUSP26Q9BV47 211 aa13.45□□□□□ -0.26
SS18-201ENST00000269137 KLHL31Q9H511 634 aa13.45□□□□□ -0.26
SS18-201ENST00000269137 ZSCAN32Q9NX65 697 aa13.45□□□□□ -0.26
SS18-201ENST00000269137 BTBD3Q9Y2F9 522 aa13.45□□□□□ -0.26
SS18-201ENST00000269137 TRBV5-3A0A0A0MS03 114 aa13.44□□□□□ -0.26
SS18-201ENST00000269137 ARHGAP10A1A4S6 786 aa13.44□□□□□ -0.26
SS18-201ENST00000269137 FURINP09958 794 aa13.44□□□□□ -0.26
SS18-201ENST00000269137 EEFSECP57772 596 aaKnown RBP13.44□□□□□ -0.26
SS18-201ENST00000269137 RGS1Q08116 209 aa13.44□□□□□ -0.26
SS18-201ENST00000269137 TGM3Q08188 693 aa13.44□□□□□ -0.26
SS18-201ENST00000269137 C2orf80Q0P641 193 aa13.44□□□□□ -0.26
SS18-201ENST00000269137 LRRC74AQ0VAA2 488 aa13.44□□□□□ -0.26
SS18-201ENST00000269137 TRAP1Q12931 704 aaKnown RBP13.44□□□□□ -0.26
SS18-201ENST00000269137 TRIM25Q14258 630 aaKnown RBP13.44□□□□□ -0.26
SS18-201ENST00000269137 ANXA8L1Q5VT79 327 aa13.44□□□□□ -0.26
SS18-201ENST00000269137 RNF44Q7L0R7 432 aa13.44□□□□□ -0.26
SS18-201ENST00000269137 ZNF438Q7Z4V0 828 aa13.44□□□□□ -0.26
SS18-201ENST00000269137 PHF6Q8IWS0 365 aaKnown RBP eCLIP13.44□□□□□ -0.26
SS18-201ENST00000269137 RNF148Q8N7C7 305 aa13.44□□□□□ -0.26
SS18-201ENST00000269137 ARL10Q8N8L6 244 aa13.44□□□□□ -0.26
SS18-201ENST00000269137 JADE3Q92613 823 aa13.44□□□□□ -0.26
SS18-201ENST00000269137 TM4SF18Q96CE8 201 aa13.44□□□□□ -0.26
SS18-201ENST00000269137 ASB9Q96DX5 294 aa13.44□□□□□ -0.26
SS18-201ENST00000269137 PPM1MQ96MI6 270 aa13.44□□□□□ -0.26
SS18-201ENST00000269137 ANKRD27Q96NW4 1050 aa13.44□□□□□ -0.26
SS18-201ENST00000269137 ZFYVE21Q9BQ24 234 aa13.44□□□□□ -0.26
SS18-201ENST00000269137 TBCDQ9BTW9 1192 aa13.44□□□□□ -0.26
SS18-201ENST00000269137 BHLHE41Q9C0J9 482 aaPredicted RBP13.44□□□□□ -0.26
SS18-201ENST00000269137 PAIP1Q9H074 479 aaKnown RBP13.44□□□□□ -0.26
SS18-201ENST00000269137 ABCG4Q9H172 646 aa13.44□□□□□ -0.26
SS18-201ENST00000269137 PRDM7Q9NQW5 492 aa13.44□□□□□ -0.26
SS18-201ENST00000269137 ATAD3AQ9NVI7 634 aa13.44□□□□□ -0.26
SS18-201ENST00000269137 VAPAQ9P0L0 249 aa13.44□□□□□ -0.26
SS18-201ENST00000269137 BCAP29Q9UHQ4 241 aa13.44□□□□□ -0.26
SS18-201ENST00000269137 L3MBTL1Q9Y468 752 aa13.44□□□□□ -0.26
SS18-201ENST00000269137 NEUROG3Q9Y4Z2 214 aa13.44□□□□□ -0.26
SS18-201ENST00000269137 NUP214P35658 2090 aaPredicted RBP13.44□□□□□ -0.26
SS18-201ENST00000269137 LAMA1P25391 3075 aa13.44□□□□□ -0.26
SS18-201ENST00000269137 A0A0A6YYD5 115 aa13.43□□□□□ -0.26
SS18-201ENST00000269137 A0A1B0GTQ1 180 aa13.43□□□□□ -0.26
SS18-201ENST00000269137 PRSS51A0A1B0GVH4 220 aa13.43□□□□□ -0.26
SS18-201ENST00000269137 ACOT8O14734 319 aa13.43□□□□□ -0.26
SS18-201ENST00000269137 ERI3O43414 337 aaKnown RBP13.43□□□□□ -0.26
SS18-201ENST00000269137 NUDT21O43809 227 aaKnown RBP13.43□□□□□ -0.26
SS18-201ENST00000269137 DFNA5O60443 496 aa13.43□□□□□ -0.26
SS18-201ENST00000269137 TBX19O60806 448 aa13.43□□□□□ -0.26
SS18-201ENST00000269137 BCAS2O75934 225 aaPredicted RBP13.43□□□□□ -0.26
SS18-201ENST00000269137 LMNAP02545 664 aaKnown RBP13.43□□□□□ -0.26
SS18-201ENST00000269137 IL3P08700 152 aa13.43□□□□□ -0.26
SS18-201ENST00000269137 PVRP15151 417 aa13.43□□□□□ -0.26
SS18-201ENST00000269137 HOXB9P17482 250 aaPredicted RBP13.43□□□□□ -0.26
SS18-201ENST00000269137 EPHA8P29322 1005 aaPredicted RBP13.43□□□□□ -0.26
SS18-201ENST00000269137 PTPN6P29350 595 aa13.43□□□□□ -0.26
SS18-201ENST00000269137 PLA2G16P53816 162 aa13.43□□□□□ -0.26
SS18-201ENST00000269137 PPP1CAP62136 330 aa13.43□□□□□ -0.26
SS18-201ENST00000269137 MS4A2Q01362 244 aa13.43□□□□□ -0.26
SS18-201ENST00000269137 KLC1Q07866 573 aa13.43□□□□□ -0.26
SS18-201ENST00000269137 DUOXA1Q1HG43 343 aa13.43□□□□□ -0.26
SS18-201ENST00000269137 TOR1AIP1Q5JTV8 583 aa13.43□□□□□ -0.26
SS18-201ENST00000269137 KANSL1Q7Z3B3 1105 aa13.43□□□□□ -0.26
SS18-201ENST00000269137 RABEPKQ7Z6M1 372 aa13.43□□□□□ -0.26
SS18-201ENST00000269137 MSRB3Q8IXL7 192 aa13.43□□□□□ -0.26
SS18-201ENST00000269137 ZBTB44Q8NCP5 570 aa13.43□□□□□ -0.26
SS18-201ENST00000269137 VPS37AQ8NEZ2 397 aa13.43□□□□□ -0.26
SS18-201ENST00000269137 CEP76Q8TAP6 659 aa13.43□□□□□ -0.26
SS18-201ENST00000269137 ZNF764Q96H86 408 aaPredicted RBP13.43□□□□□ -0.26
SS18-201ENST00000269137 CCDC115Q96NT0 180 aa13.43□□□□□ -0.26
SS18-201ENST00000269137 TEFMQ96QE5 360 aaKnown RBP13.43□□□□□ -0.26
SS18-201ENST00000269137 SH3GL1Q99961 368 aa13.43□□□□□ -0.26
SS18-201ENST00000269137 C17orf62Q9BQA9 187 aa13.43□□□□□ -0.26
SS18-201ENST00000269137 RAB33BQ9H082 229 aa13.43□□□□□ -0.26
SS18-201ENST00000269137 SLC25A37Q9NYZ2 338 aa13.43□□□□□ -0.26
SS18-201ENST00000269137 EPHA6Q9UF33 1036 aa13.43□□□□□ -0.26
SS18-201ENST00000269137 BTNL2Q9UIR0 455 aa13.43□□□□□ -0.26
SS18-201ENST00000269137 AP3M1Q9Y2T2 418 aa13.43□□□□□ -0.26
SS18-201ENST00000269137 RHPN2P1A8MT19 583 aa13.43□□□□□ -0.26
SS18-201ENST00000269137 RNASET2O00584 256 aaKnown RBP13.43□□□□□ -0.26
SS18-201ENST00000269137 RFXANKO14593 260 aa13.43□□□□□ -0.26
SS18-201ENST00000269137 DNAJA2O60884 412 aa13.43□□□□□ -0.26
SS18-201ENST00000269137 SCELO95171 688 aa13.43□□□□□ -0.26
SS18-201ENST00000269137 SLC35G6P0C7Q6 338 aa13.43□□□□□ -0.26
SS18-201ENST00000269137 DDCP20711 480 aa13.43□□□□□ -0.26
SS18-201ENST00000269137 HIST1H1TP22492 207 aaPredicted RBP13.43□□□□□ -0.26
SS18-201ENST00000269137 SSR2P43308 183 aa13.43□□□□□ -0.26
SS18-201ENST00000269137 PLIN5Q00G26 463 aa13.43□□□□□ -0.26
SS18-201ENST00000269137 CCNIQ14094 377 aa13.43□□□□□ -0.26
SS18-201ENST00000269137 RUNDC3AQ59EK9 446 aa13.43□□□□□ -0.26
SS18-201ENST00000269137 RABL3Q5HYI8 236 aa13.43□□□□□ -0.26
SS18-201ENST00000269137 MANEAQ5SRI9 462 aa13.43□□□□□ -0.26
SS18-201ENST00000269137 TRIM40Q6P9F5 258 aa13.43□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms