RNA–Protein interactions for RNA: ENST00000262188.12

SMARCD3-201, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMARCD3, Length 1,993 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD3-201ENST00000262188 NR6A1Q15406 480 aa26.22■■□□□ 1.79
SMARCD3-201ENST00000262188 IMPG1Q17R60 797 aa26.22■■□□□ 1.79
SMARCD3-201ENST00000262188 HKDC1Q2TB90 917 aa26.22■■□□□ 1.79
SMARCD3-201ENST00000262188 LSM12Q3MHD2 195 aaKnown RBP26.22■■□□□ 1.79
SMARCD3-201ENST00000262188 TRIM46Q7Z4K8 759 aa26.22■■□□□ 1.79
SMARCD3-201ENST00000262188 PRSS42Q7Z5A4 293 aa26.22■■□□□ 1.79
SMARCD3-201ENST00000262188 ALYREFQ86V81 257 aaKnown RBP26.22■■□□□ 1.79
SMARCD3-201ENST00000262188 SLITRK4Q8IW52 837 aa26.22■■□□□ 1.79
SMARCD3-201ENST00000262188 DNAJC22Q8N4W6 341 aa26.22■■□□□ 1.79
SMARCD3-201ENST00000262188 TCTN2Q96GX1 697 aa26.22■■□□□ 1.79
SMARCD3-201ENST00000262188 MRPL1Q9BYD6 325 aaKnown RBP26.22■■□□□ 1.79
SMARCD3-201ENST00000262188 A0A0G2JN53 185 aa26.21■■□□□ 1.79
SMARCD3-201ENST00000262188 TMEM247A6NEH6 219 aa26.21■■□□□ 1.79
SMARCD3-201ENST00000262188 E9PBE3 544 aa26.21■■□□□ 1.79
SMARCD3-201ENST00000262188 KLHL41O60662 606 aa26.21■■□□□ 1.79
SMARCD3-201ENST00000262188 B3GALT4O96024 378 aa26.21■■□□□ 1.79
SMARCD3-201ENST00000262188 FOLR1P15328 257 aa26.21■■□□□ 1.79
SMARCD3-201ENST00000262188 TUBB3Q13509 450 aa26.21■■□□□ 1.79
SMARCD3-201ENST00000262188 GPR19Q15760 415 aa26.21■■□□□ 1.79
SMARCD3-201ENST00000262188 SLCO6A1Q86UG4 719 aa26.21■■□□□ 1.79
SMARCD3-201ENST00000262188 KCT2Q8NC54 265 aa26.21■■□□□ 1.79
SMARCD3-201ENST00000262188 SNRNP27Q8WVK2 155 aaKnown RBP26.21■■□□□ 1.79
SMARCD3-201ENST00000262188 APIPQ96GX9 242 aa26.21■■□□□ 1.79
SMARCD3-201ENST00000262188 RILPQ96NA2 401 aa26.21■■□□□ 1.79
SMARCD3-201ENST00000262188 ZNF184Q99676 751 aaPredicted RBP26.21■■□□□ 1.79
SMARCD3-201ENST00000262188 SARGQ9BW04 601 aa26.21■■□□□ 1.79
SMARCD3-201ENST00000262188 SORBS1Q9BX66 1292 aaKnown RBP26.21■■□□□ 1.79
SMARCD3-201ENST00000262188 PDE7BQ9NP56 450 aa26.21■■□□□ 1.79
SMARCD3-201ENST00000262188 AP1M2Q9Y6Q5 423 aa26.21■■□□□ 1.79
SMARCD3-201ENST00000262188 C4orf51C9J302 202 aa26.2■■□□□ 1.79
SMARCD3-201ENST00000262188 RFPL3O75679 317 aa26.2■■□□□ 1.79
SMARCD3-201ENST00000262188 GABRA4P48169 554 aa26.2■■□□□ 1.79
SMARCD3-201ENST00000262188 ARL4DP49703 201 aa26.2■■□□□ 1.79
SMARCD3-201ENST00000262188 HYAL2Q12891 473 aa26.2■■□□□ 1.79
SMARCD3-201ENST00000262188 MCATQ8IVS2 390 aaKnown RBP26.2■■□□□ 1.79
SMARCD3-201ENST00000262188 SLC13A3Q8WWT9 602 aa26.2■■□□□ 1.79
SMARCD3-201ENST00000262188 MAELQ96JY0 434 aaKnown RBP26.2■■□□□ 1.79
SMARCD3-201ENST00000262188 COL27A1Q8IZC6 1860 aaPredicted RBP26.2■■□□□ 1.78
SMARCD3-201ENST00000262188 LSM1O15116 133 aaKnown RBP26.2■■□□□ 1.78
SMARCD3-201ENST00000262188 HSD11B2P80365 405 aa26.2■■□□□ 1.78
SMARCD3-201ENST00000262188 DHRS13Q6UX07 377 aa26.2■■□□□ 1.78
SMARCD3-201ENST00000262188 LRRC74BQ6ZQY2 392 aa26.2■■□□□ 1.78
SMARCD3-201ENST00000262188 SPATA24Q86W54 205 aa26.2■■□□□ 1.78
SMARCD3-201ENST00000262188 SLC45A3Q96JT2 553 aa26.2■■□□□ 1.78
SMARCD3-201ENST00000262188 C1orf50Q9BV19 199 aa26.2■■□□□ 1.78
SMARCD3-201ENST00000262188 MS4A8Q9BY19 250 aa26.2■■□□□ 1.78
SMARCD3-201ENST00000262188 ZNF768Q9H5H4 540 aaKnown RBP26.2■■□□□ 1.78
SMARCD3-201ENST00000262188 TCF7L2Q9NQB0 619 aa26.2■■□□□ 1.78
SMARCD3-201ENST00000262188 SEMA5BQ9P283 1151 aa26.2■■□□□ 1.78
SMARCD3-201ENST00000262188 TRIM33Q9UPN9 1127 aa26.2■■□□□ 1.78
SMARCD3-201ENST00000262188 RTCAO00442 366 aaKnown RBP26.19■■□□□ 1.78
SMARCD3-201ENST00000262188 HYAL3O43820 417 aaPredicted RBP26.19■■□□□ 1.78
SMARCD3-201ENST00000262188 DCTN3O75935 186 aa26.19■■□□□ 1.78
SMARCD3-201ENST00000262188 PORP16435 677 aaPredicted RBP26.19■■□□□ 1.78
SMARCD3-201ENST00000262188 PIK3CBP42338 1070 aa26.19■■□□□ 1.78
SMARCD3-201ENST00000262188 LARP4Q71RC2 724 aaKnown RBP eCLIP26.19■■□□□ 1.78
SMARCD3-201ENST00000262188 ASPGQ86U10 573 aa26.19■■□□□ 1.78
SMARCD3-201ENST00000262188 TBC1D19Q8N5T2 526 aa26.19■■□□□ 1.78
SMARCD3-201ENST00000262188 KLHL6Q8WZ60 621 aa26.19■■□□□ 1.78
SMARCD3-201ENST00000262188 SLC41A2Q96JW4 573 aa26.19■■□□□ 1.78
SMARCD3-201ENST00000262188 PITHD1Q9GZP4 211 aaPredicted RBP26.19■■□□□ 1.78
SMARCD3-201ENST00000262188 ADAMTS20P59510 1910 aa26.19■■□□□ 1.78
SMARCD3-201ENST00000262188 WDFY3Q8IZQ1 3526 aa26.19■■□□□ 1.78
SMARCD3-201ENST00000262188 FOXE1O00358 373 aaPredicted RBP26.18■■□□□ 1.78
SMARCD3-201ENST00000262188 NELFEP18615 380 aaKnown RBP26.18■■□□□ 1.78
SMARCD3-201ENST00000262188 AHRP35869 848 aa26.18■■□□□ 1.78
SMARCD3-201ENST00000262188 CLCN2P51788 898 aa26.18■■□□□ 1.78
SMARCD3-201ENST00000262188 INSM1Q01101 510 aaPredicted RBP26.18■■□□□ 1.78
SMARCD3-201ENST00000262188 RFTN2Q52LD8 501 aaPredicted RBP26.18■■□□□ 1.78
SMARCD3-201ENST00000262188 SLC15A3Q8IY34 581 aa26.18■■□□□ 1.78
SMARCD3-201ENST00000262188 STX18Q9P2W9 335 aaKnown RBP26.18■■□□□ 1.78
SMARCD3-201ENST00000262188 MRPS2Q9Y399 296 aaKnown RBP26.18■■□□□ 1.78
SMARCD3-201ENST00000262188 SLC28A1O00337 649 aa26.18■■□□□ 1.78
SMARCD3-201ENST00000262188 RGS14O43566 566 aa26.18■■□□□ 1.78
SMARCD3-201ENST00000262188 GBAP04062 536 aa26.18■■□□□ 1.78
SMARCD3-201ENST00000262188 LIMK1P53667 647 aa26.18■■□□□ 1.78
SMARCD3-201ENST00000262188 CSTF3Q12996 717 aaKnown RBP26.18■■□□□ 1.78
SMARCD3-201ENST00000262188 AP5B1Q2VPB7 878 aa26.18■■□□□ 1.78
SMARCD3-201ENST00000262188 DTWD1Q8N5C7 304 aa26.18■■□□□ 1.78
SMARCD3-201ENST00000262188 ZCCHC10Q8TBK6 192 aa26.18■■□□□ 1.78
SMARCD3-201ENST00000262188 VPS29Q9UBQ0 182 aa26.18■■□□□ 1.78
SMARCD3-201ENST00000262188 CLEC3AO75596 197 aa26.17■■□□□ 1.78
SMARCD3-201ENST00000262188 RPL38P63173 70 aaKnown RBP26.17■■□□□ 1.78
SMARCD3-201ENST00000262188 C16orf72Q14CZ0 275 aa26.17■■□□□ 1.78
SMARCD3-201ENST00000262188 TOR1AIP1Q5JTV8 583 aa26.17■■□□□ 1.78
SMARCD3-201ENST00000262188 C6orf136Q5SQH8 315 aa26.17■■□□□ 1.78
SMARCD3-201ENST00000262188 D2HGDHQ8N465 521 aa26.17■■□□□ 1.78
SMARCD3-201ENST00000262188 WDR48Q8TAF3 677 aa26.17■■□□□ 1.78
SMARCD3-201ENST00000262188 RERGQ96A58 199 aaPredicted RBP26.17■■□□□ 1.78
SMARCD3-201ENST00000262188 TM4SF19Q96DZ7 209 aa26.17■■□□□ 1.78
SMARCD3-201ENST00000262188 TUBB6Q9BUF5 446 aa26.17■■□□□ 1.78
SMARCD3-201ENST00000262188 SPRTNQ9H040 489 aaPredicted RBP26.17■■□□□ 1.78
SMARCD3-201ENST00000262188 BRF2Q9HAW0 419 aa26.17■■□□□ 1.78
SMARCD3-201ENST00000262188 TSC22D4Q9Y3Q8 395 aa26.17■■□□□ 1.78
SMARCD3-201ENST00000262188 LRIT2A6NDA9 550 aa26.16■■□□□ 1.78
SMARCD3-201ENST00000262188 SEC22BO75396 215 aa26.16■■□□□ 1.78
SMARCD3-201ENST00000262188 PLA2G16P53816 162 aa26.16■■□□□ 1.78
SMARCD3-201ENST00000262188 TBL3Q12788 808 aaKnown RBP26.16■■□□□ 1.78
SMARCD3-201ENST00000262188 PRAMEF17Q5VTA0 474 aa26.16■■□□□ 1.78
SMARCD3-201ENST00000262188 ACAD11Q709F0 780 aa26.16■■□□□ 1.78
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms