RNA–Protein interactions for RNA: ENST00000259239.7

IMP4-201, Transcript of IMP4, U3 small nucleolar ribonucleoprotein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene IMP4, Length 1,740 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IMP4-201ENST00000259239 CD180Q99467 661 aa16.96■□□□□ 0.3
IMP4-201ENST00000259239 CADM1Q9BY67 442 aaKnown RBP16.96■□□□□ 0.3
IMP4-201ENST00000259239 NDUFAF1Q9Y375 327 aa16.96■□□□□ 0.3
IMP4-201ENST00000259239 RRP15Q9Y3B9 282 aaKnown RBP16.96■□□□□ 0.3
IMP4-201ENST00000259239 MN1Q10571 1320 aaPredicted RBP16.95■□□□□ 0.3
IMP4-201ENST00000259239 SPEGQ15772 3267 aa16.95■□□□□ 0.3
IMP4-201ENST00000259239 RETP07949 1114 aa16.95■□□□□ 0.3
IMP4-201ENST00000259239 PRPS1L1P21108 318 aa16.95■□□□□ 0.3
IMP4-201ENST00000259239 VSX2P58304 361 aaPredicted RBP16.95■□□□□ 0.3
IMP4-201ENST00000259239 RAB8AP61006 207 aa16.95■□□□□ 0.3
IMP4-201ENST00000259239 SNRPNP63162 240 aaKnown RBP16.95■□□□□ 0.3
IMP4-201ENST00000259239 ART3Q13508 389 aa16.95■□□□□ 0.3
IMP4-201ENST00000259239 PROX2Q3B8N5 592 aa16.95■□□□□ 0.3
IMP4-201ENST00000259239 TRIM40Q6P9F5 258 aa16.95■□□□□ 0.3
IMP4-201ENST00000259239 ABHD17CQ6PCB6 329 aa16.95■□□□□ 0.3
IMP4-201ENST00000259239 PLXDC1Q8IUK5 500 aa16.95■□□□□ 0.3
IMP4-201ENST00000259239 DSELQ8IZU8 1212 aa16.95■□□□□ 0.3
IMP4-201ENST00000259239 AMER3Q8N944 861 aa16.95■□□□□ 0.3
IMP4-201ENST00000259239 SUMF1Q8NBK3 374 aa16.95■□□□□ 0.3
IMP4-201ENST00000259239 CAMKVQ8NCB2 501 aa16.95■□□□□ 0.3
IMP4-201ENST00000259239 ZCCHC10Q8TBK6 192 aa16.95■□□□□ 0.3
IMP4-201ENST00000259239 TCTN2Q96GX1 697 aa16.95■□□□□ 0.3
IMP4-201ENST00000259239 KCNC2Q96PR1 638 aa16.95■□□□□ 0.3
IMP4-201ENST00000259239 CCDC3Q9BQI4 270 aa16.95■□□□□ 0.3
IMP4-201ENST00000259239 SOHLH2Q9NX45 425 aa16.95■□□□□ 0.3
IMP4-201ENST00000259239 ARHGAP10A1A4S6 786 aa16.94■□□□□ 0.3
IMP4-201ENST00000259239 SCAMP2O15127 329 aaKnown RBP16.94■□□□□ 0.3
IMP4-201ENST00000259239 PRMT3O60678 531 aa16.94■□□□□ 0.3
IMP4-201ENST00000259239 B3GALT4O96024 378 aa16.94■□□□□ 0.3
IMP4-201ENST00000259239 C9P02748 559 aa16.94■□□□□ 0.3
IMP4-201ENST00000259239 KRT16P08779 473 aa16.94■□□□□ 0.3
IMP4-201ENST00000259239 ZNF883P0CG24 379 aa16.94■□□□□ 0.3
IMP4-201ENST00000259239 ZNF888P0CJ79 500 aaPredicted RBP16.94■□□□□ 0.3
IMP4-201ENST00000259239 PCSK2P16519 638 aa16.94■□□□□ 0.3
IMP4-201ENST00000259239 MLLT3P42568 568 aaPredicted RBP16.94■□□□□ 0.3
IMP4-201ENST00000259239 TAS2R50P59544 299 aa16.94■□□□□ 0.3
IMP4-201ENST00000259239 DAB2P98082 770 aa16.94■□□□□ 0.3
IMP4-201ENST00000259239 TCF15Q12870 199 aa16.94■□□□□ 0.3
IMP4-201ENST00000259239 COL9A2Q14055 689 aaPredicted RBP16.94■□□□□ 0.3
IMP4-201ENST00000259239 SF3A2Q15428 464 aaKnown RBP16.94■□□□□ 0.3
IMP4-201ENST00000259239 UGT8Q16880 541 aa16.94■□□□□ 0.3
IMP4-201ENST00000259239 DNAL1Q4LDG9 190 aa16.94■□□□□ 0.3
IMP4-201ENST00000259239 SNAP47Q5SQN1 464 aa16.94■□□□□ 0.3
IMP4-201ENST00000259239 PRSS33Q8NF86 280 aa16.94■□□□□ 0.3
IMP4-201ENST00000259239 OR7A2PQ8NGA2 310 aa16.94■□□□□ 0.3
IMP4-201ENST00000259239 PUM2Q8TB72 1066 aaKnown RBP eCLIP16.94■□□□□ 0.3
IMP4-201ENST00000259239 NAT6Q93015 286 aa16.94■□□□□ 0.3
IMP4-201ENST00000259239 GAL3ST3Q96A11 431 aa16.94■□□□□ 0.3
IMP4-201ENST00000259239 TESCQ96BS2 214 aa16.94■□□□□ 0.3
IMP4-201ENST00000259239 QRFPRQ96P65 431 aa16.94■□□□□ 0.3
IMP4-201ENST00000259239 NUDT22Q9BRQ3 303 aa16.94■□□□□ 0.3
IMP4-201ENST00000259239 LRFN3Q9BTN0 628 aa16.94■□□□□ 0.3
IMP4-201ENST00000259239 DDX31Q9H8H2 851 aaKnown RBP16.94■□□□□ 0.3
IMP4-201ENST00000259239 MYNNQ9NPC7 610 aa16.94■□□□□ 0.3
IMP4-201ENST00000259239 ADAM29Q9UKF5 820 aa16.94■□□□□ 0.3
IMP4-201ENST00000259239 SCN2AQ99250 2005 aa16.94■□□□□ 0.3
IMP4-201ENST00000259239 DYTNA2CJ06 578 aa16.93■□□□□ 0.3
IMP4-201ENST00000259239 GSC2O15499 205 aa16.93■□□□□ 0.3
IMP4-201ENST00000259239 CFLARO15519 480 aa16.93■□□□□ 0.3
IMP4-201ENST00000259239 TMPRSS11DO60235 418 aa16.93■□□□□ 0.3
IMP4-201ENST00000259239 IL6P05231 212 aa16.93■□□□□ 0.3
IMP4-201ENST00000259239 PGRP06401 933 aa16.93■□□□□ 0.3
IMP4-201ENST00000259239 CTSBP07858 339 aa16.93■□□□□ 0.3
IMP4-201ENST00000259239 IL3P08700 152 aa16.93■□□□□ 0.3
IMP4-201ENST00000259239 CKMT1AP12532 417 aa16.93■□□□□ 0.3
IMP4-201ENST00000259239 COX7A2P14406 83 aa16.93■□□□□ 0.3
IMP4-201ENST00000259239 MAPK12P53778 367 aa16.93■□□□□ 0.3
IMP4-201ENST00000259239 C21orf58P58505 322 aa16.93■□□□□ 0.3
IMP4-201ENST00000259239 TLR1Q15399 786 aa16.93■□□□□ 0.3
IMP4-201ENST00000259239 PGS1Q32NB8 556 aa16.93■□□□□ 0.3
IMP4-201ENST00000259239 PAGE3Q5JUK9 113 aa16.93■□□□□ 0.3
IMP4-201ENST00000259239 ANKRD26P1Q6NSI1 321 aa16.93■□□□□ 0.3
IMP4-201ENST00000259239 SLC2A7Q6PXP3 512 aa16.93■□□□□ 0.3
IMP4-201ENST00000259239 WDR74Q6RFH5 385 aaPredicted RBP16.93■□□□□ 0.3
IMP4-201ENST00000259239 DEFB107AQ8IZN7 70 aa16.93■□□□□ 0.3
IMP4-201ENST00000259239 TMEM132CQ8N3T6 1108 aa16.93■□□□□ 0.3
IMP4-201ENST00000259239 DNAJC22Q8N4W6 341 aa16.93■□□□□ 0.3
IMP4-201ENST00000259239 CSNK1A1LQ8N752 337 aa16.93■□□□□ 0.3
IMP4-201ENST00000259239 OR8K5Q8NH50 307 aa16.93■□□□□ 0.3
IMP4-201ENST00000259239 UTP4Q969X6 686 aaKnown RBP16.93■□□□□ 0.3
IMP4-201ENST00000259239 PRDM7Q9NQW5 492 aa16.93■□□□□ 0.3
IMP4-201ENST00000259239 STARD5Q9NSY2 213 aa16.93■□□□□ 0.3
IMP4-201ENST00000259239 DNAAF2Q9NVR5 837 aaKnown RBP16.93■□□□□ 0.3
IMP4-201ENST00000259239 MAP10Q9P2G4 905 aa16.93■□□□□ 0.3
IMP4-201ENST00000259239 LEF1Q9UJU2 399 aaPredicted RBP16.93■□□□□ 0.3
IMP4-201ENST00000259239 ATXN7L1Q9ULK2 861 aaPredicted RBP16.93■□□□□ 0.3
IMP4-201ENST00000259239 COL5A1P20908 1838 aaPredicted RBP16.93■□□□□ 0.3
IMP4-201ENST00000259239 OTOGLQ3ZCN5 2332 aa16.93■□□□□ 0.3
IMP4-201ENST00000259239 A0A0A6YYD5 115 aa16.93■□□□□ 0.3
IMP4-201ENST00000259239 ZBTB11O95625 1053 aaPredicted RBP16.93■□□□□ 0.3
IMP4-201ENST00000259239 RPLP0P05388 317 aaKnown RBP16.93■□□□□ 0.3
IMP4-201ENST00000259239 NQO1P15559 274 aaKnown RBP16.93■□□□□ 0.3
IMP4-201ENST00000259239 HIST1H1TP22492 207 aaPredicted RBP16.93■□□□□ 0.3
IMP4-201ENST00000259239 CERS1P27544 350 aa16.93■□□□□ 0.3
IMP4-201ENST00000259239 HPCAL1P37235 193 aa16.93■□□□□ 0.3
IMP4-201ENST00000259239 SEPHS1P49903 392 aa16.93■□□□□ 0.3
IMP4-201ENST00000259239 CORO7P57737 925 aa16.93■□□□□ 0.3
IMP4-201ENST00000259239 CCL7P80098 99 aa16.93■□□□□ 0.3
IMP4-201ENST00000259239 MC1RQ01726 317 aa16.93■□□□□ 0.3
IMP4-201ENST00000259239 SUZ12Q15022 739 aaKnown RBP16.93■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms