RNA–Protein interactions for RNA: ENST00000258607.9

CKAP2-201, Transcript of cytoskeleton associated protein 2, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CKAP2, Length 3,375 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP2-201ENST00000258607 ZCCHC3Q9NUD5 404 aaKnown RBP8.71□□□□□ -1.01
CKAP2-201ENST00000258607 IFT80Q9P2H3 777 aaPredicted RBP8.71□□□□□ -1.01
CKAP2-201ENST00000258607 CDH7Q9ULB5 785 aa8.71□□□□□ -1.01
CKAP2-201ENST00000258607 SLC6A14Q9UN76 642 aa8.71□□□□□ -1.01
CKAP2-201ENST00000258607 PCDHGA8Q9Y5G5 932 aa8.71□□□□□ -1.01
CKAP2-201ENST00000258607 PLXNA4Q9HCM2 1894 aa8.71□□□□□ -1.01
CKAP2-201ENST00000258607 PLXND1Q9Y4D7 1925 aa8.71□□□□□ -1.02
CKAP2-201ENST00000258607 SLC28A2O43868 658 aa8.71□□□□□ -1.02
CKAP2-201ENST00000258607 DNAJB6O75190 326 aa8.71□□□□□ -1.02
CKAP2-201ENST00000258607 MATN4O95460 622 aa8.71□□□□□ -1.02
CKAP2-201ENST00000258607 H6PDO95479 791 aa8.71□□□□□ -1.02
CKAP2-201ENST00000258607 LAMP2P13473 410 aa8.71□□□□□ -1.02
CKAP2-201ENST00000258607 RPS3P23396 243 aaKnown RBP eCLIP8.71□□□□□ -1.02
CKAP2-201ENST00000258607 IGFBP5P24593 272 aa8.71□□□□□ -1.02
CKAP2-201ENST00000258607 ARHGDIAP52565 204 aa8.71□□□□□ -1.02
CKAP2-201ENST00000258607 SLC16A1P53985 500 aa8.71□□□□□ -1.02
CKAP2-201ENST00000258607 BTN3A2P78410 334 aa8.71□□□□□ -1.02
CKAP2-201ENST00000258607 GSTM4Q03013 218 aa8.71□□□□□ -1.02
CKAP2-201ENST00000258607 MAD2L1Q13257 205 aaPredicted RBP8.71□□□□□ -1.02
CKAP2-201ENST00000258607 PMS2P3Q13401 168 aa8.71□□□□□ -1.02
CKAP2-201ENST00000258607 RAPSNQ13702 412 aa8.71□□□□□ -1.02
CKAP2-201ENST00000258607 KIAA0040Q15053 153 aa8.71□□□□□ -1.02
CKAP2-201ENST00000258607 CYP2A13Q16696 494 aa8.71□□□□□ -1.02
CKAP2-201ENST00000258607 PRSS53Q2L4Q9 553 aa8.71□□□□□ -1.02
CKAP2-201ENST00000258607 AMZ1Q400G9 498 aa8.71□□□□□ -1.02
CKAP2-201ENST00000258607 PRRT3Q5FWE3 981 aa8.71□□□□□ -1.02
CKAP2-201ENST00000258607 TJAP1Q5JTD0 557 aa8.71□□□□□ -1.02
CKAP2-201ENST00000258607 CCNJQ5T5M9 372 aa8.71□□□□□ -1.02
CKAP2-201ENST00000258607 PRMT9Q6P2P2 845 aa8.71□□□□□ -1.02
CKAP2-201ENST00000258607 POMZP3Q6PJE2 187 aa8.71□□□□□ -1.02
CKAP2-201ENST00000258607 ZNF548Q8NEK5 533 aaPredicted RBP8.71□□□□□ -1.02
CKAP2-201ENST00000258607 FAM46DQ8NEK8 389 aa8.71□□□□□ -1.02
CKAP2-201ENST00000258607 FAM81AQ8TBF8 368 aa8.71□□□□□ -1.02
CKAP2-201ENST00000258607 FAM83CQ9BQN1 747 aa8.71□□□□□ -1.02
CKAP2-201ENST00000258607 OSBPL11Q9BXB4 747 aa8.71□□□□□ -1.02
CKAP2-201ENST00000258607 CFHR5Q9BXR6 569 aa8.71□□□□□ -1.02
CKAP2-201ENST00000258607 ZDHHC5Q9C0B5 715 aa8.71□□□□□ -1.02
CKAP2-201ENST00000258607 TPK1Q9H3S4 243 aa8.71□□□□□ -1.02
CKAP2-201ENST00000258607 SFXN1Q9H9B4 322 aa8.71□□□□□ -1.02
CKAP2-201ENST00000258607 ADAP2Q9NPF8 381 aa8.71□□□□□ -1.02
CKAP2-201ENST00000258607 AGPAT4Q9NRZ5 378 aa8.71□□□□□ -1.02
CKAP2-201ENST00000258607 MAGEL2Q9UJ55 1249 aa8.71□□□□□ -1.02
CKAP2-201ENST00000258607 FAM32AQ9Y421 112 aaKnown RBP8.71□□□□□ -1.02
CKAP2-201ENST00000258607 PCDHB3Q9Y5E6 796 aa8.71□□□□□ -1.02
CKAP2-201ENST00000258607 ST14Q9Y5Y6 855 aa8.71□□□□□ -1.02
CKAP2-201ENST00000258607 AGAP14A8MT82 685 aa8.7□□□□□ -1.02
CKAP2-201ENST00000258607 IQCJ-SCHIP1C9J366 451 aaPredicted RBP8.7□□□□□ -1.02
CKAP2-201ENST00000258607 LDB3O75112 727 aa8.7□□□□□ -1.02
CKAP2-201ENST00000258607 SMIM18P0DKX4 95 aa8.7□□□□□ -1.02
CKAP2-201ENST00000258607 HPCAL1P37235 193 aa8.7□□□□□ -1.02
CKAP2-201ENST00000258607 PI4KAP42356 2102 aa8.7□□□□□ -1.02
CKAP2-201ENST00000258607 PRLHRP49683 370 aa8.7□□□□□ -1.02
CKAP2-201ENST00000258607 ATP1A4Q13733 1029 aa8.7□□□□□ -1.02
CKAP2-201ENST00000258607 PRR23BQ6ZRT6 265 aa8.7□□□□□ -1.02
CKAP2-201ENST00000258607 Q7L0L9 218 aa8.7□□□□□ -1.02
CKAP2-201ENST00000258607 LRRC70Q7Z2Q7 622 aa8.7□□□□□ -1.02
CKAP2-201ENST00000258607 ZNF540Q8NDQ6 660 aa8.7□□□□□ -1.02
CKAP2-201ENST00000258607 CATSPER1Q8NEC5 780 aa8.7□□□□□ -1.02
CKAP2-201ENST00000258607 DDHD1Q8NEL9 900 aa8.7□□□□□ -1.02
CKAP2-201ENST00000258607 MIPOL1Q8TD10 442 aa8.7□□□□□ -1.02
CKAP2-201ENST00000258607 ART5Q96L15 291 aa8.7□□□□□ -1.02
CKAP2-201ENST00000258607 PAIP1Q9H074 479 aaKnown RBP8.7□□□□□ -1.02
CKAP2-201ENST00000258607 RAD21L1Q9H4I0 556 aa8.7□□□□□ -1.02
CKAP2-201ENST00000258607 CLMPQ9H6B4 373 aa8.7□□□□□ -1.02
CKAP2-201ENST00000258607 C6orf106Q9H6K1 298 aaPredicted RBP8.7□□□□□ -1.02
CKAP2-201ENST00000258607 KAT8Q9H7Z6 458 aaKnown RBP8.7□□□□□ -1.02
CKAP2-201ENST00000258607 REEP1Q9H902 201 aa8.7□□□□□ -1.02
CKAP2-201ENST00000258607 OLAHQ9NV23 265 aa8.7□□□□□ -1.02
CKAP2-201ENST00000258607 TBC1D29Q9UFV1 150 aa8.7□□□□□ -1.02
CKAP2-201ENST00000258607 ZFR2Q9UPR6 939 aaKnown RBP8.7□□□□□ -1.02
CKAP2-201ENST00000258607 CCL27Q9Y4X3 112 aa8.7□□□□□ -1.02
CKAP2-201ENST00000258607 TNRC18O15417 2968 aaPredicted RBP8.7□□□□□ -1.02
CKAP2-201ENST00000258607 A8MUA0 341 aa8.7□□□□□ -1.02
CKAP2-201ENST00000258607 M0R3H8 397 aa8.7□□□□□ -1.02
CKAP2-201ENST00000258607 GFRA2O00451 464 aa8.7□□□□□ -1.02
CKAP2-201ENST00000258607 PGRMC2O15173 223 aa8.7□□□□□ -1.02
CKAP2-201ENST00000258607 SUV39H1O43463 412 aa8.7□□□□□ -1.02
CKAP2-201ENST00000258607 C1GALT1C1LP0DN25 315 aa8.7□□□□□ -1.02
CKAP2-201ENST00000258607 OR12D1P0DN82 309 aa8.7□□□□□ -1.02
CKAP2-201ENST00000258607 RAP2AP10114 183 aa8.7□□□□□ -1.02
CKAP2-201ENST00000258607 NR2F1P10589 423 aa8.7□□□□□ -1.02
CKAP2-201ENST00000258607 RPL5P46777 297 aaKnown RBP8.7□□□□□ -1.02
CKAP2-201ENST00000258607 AVPR1BP47901 424 aa8.7□□□□□ -1.02
CKAP2-201ENST00000258607 SEPHS1P49903 392 aa8.7□□□□□ -1.02
CKAP2-201ENST00000258607 PSMD7P51665 324 aa8.7□□□□□ -1.02
CKAP2-201ENST00000258607 CLDN8P56748 225 aa8.7□□□□□ -1.02
CKAP2-201ENST00000258607 SOWAHCQ53LP3 525 aaPredicted RBP8.7□□□□□ -1.02
CKAP2-201ENST00000258607 PLEKHS1Q5SXH7 462 aa8.7□□□□□ -1.02
CKAP2-201ENST00000258607 TMEM107Q6UX40 140 aa8.7□□□□□ -1.02
CKAP2-201ENST00000258607 SLCO4C1Q6ZQN7 724 aa8.7□□□□□ -1.02
CKAP2-201ENST00000258607 TAF8Q7Z7C8 310 aa8.7□□□□□ -1.02
CKAP2-201ENST00000258607 TBC1D21Q8IYX1 336 aa8.7□□□□□ -1.02
CKAP2-201ENST00000258607 ARL10Q8N8L6 244 aa8.7□□□□□ -1.02
CKAP2-201ENST00000258607 ANKRD53Q8N9V6 530 aa8.7□□□□□ -1.02
CKAP2-201ENST00000258607 FATE1Q969F0 183 aa8.7□□□□□ -1.02
CKAP2-201ENST00000258607 TIFAQ96CG3 184 aa8.7□□□□□ -1.02
CKAP2-201ENST00000258607 NR1H4Q96RI1 486 aaPredicted RBP8.7□□□□□ -1.02
CKAP2-201ENST00000258607 NTMT1Q9BV86 223 aa8.7□□□□□ -1.02
CKAP2-201ENST00000258607 UGT2B28Q9BY64 529 aa8.7□□□□□ -1.02
CKAP2-201ENST00000258607 BRINP2Q9C0B6 783 aa8.7□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 60.9 ms