RNA–Protein interactions for RNA: ENST00000258499.7

USP44-201, Transcript of ubiquitin specific peptidase 44, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP44, Length 4,022 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP44-201ENST00000258499 GSTM4Q03013 218 aa4.56□□□□□ -1.68
USP44-201ENST00000258499 CBX2Q14781 532 aaPredicted RBP4.56□□□□□ -1.68
USP44-201ENST00000258499 OXA1LQ15070 435 aa4.56□□□□□ -1.68
USP44-201ENST00000258499 SNAPC1Q16533 368 aa4.56□□□□□ -1.68
USP44-201ENST00000258499 INAVAQ3KP66 663 aa4.56□□□□□ -1.68
USP44-201ENST00000258499 LEXMQ3ZCV2 418 aa4.56□□□□□ -1.68
USP44-201ENST00000258499 CCSMST1Q4G0I0 132 aa4.56□□□□□ -1.68
USP44-201ENST00000258499 GPAT3Q53EU6 434 aa4.56□□□□□ -1.68
USP44-201ENST00000258499 CLEC12AQ5QGZ9 265 aa4.56□□□□□ -1.68
USP44-201ENST00000258499 LIN28BQ6ZN17 250 aaKnown RBP eCLIP4.56□□□□□ -1.68
USP44-201ENST00000258499 SLC16A12Q6ZSM3 486 aa4.56□□□□□ -1.68
USP44-201ENST00000258499 TUBA1AQ71U36 451 aa4.56□□□□□ -1.68
USP44-201ENST00000258499 SERPINA11Q86U17 422 aa4.56□□□□□ -1.68
USP44-201ENST00000258499 METTL3Q86U44 580 aaKnown RBP4.56□□□□□ -1.68
USP44-201ENST00000258499 ENTHD1Q8IYW4 607 aa4.56□□□□□ -1.68
USP44-201ENST00000258499 ZNF614Q8N883 585 aa4.56□□□□□ -1.68
USP44-201ENST00000258499 MINDY2Q8NBR6 621 aa4.56□□□□□ -1.68
USP44-201ENST00000258499 RHOXF1Q8NHV9 184 aa4.56□□□□□ -1.68
USP44-201ENST00000258499 ING5Q8WYH8 240 aa4.56□□□□□ -1.68
USP44-201ENST00000258499 ISG20Q96AZ6 181 aaKnown RBP4.56□□□□□ -1.68
USP44-201ENST00000258499 CNDP2Q96KP4 475 aaKnown RBP4.56□□□□□ -1.68
USP44-201ENST00000258499 DEFB118Q96PH6 123 aa4.56□□□□□ -1.68
USP44-201ENST00000258499 TRNT1Q96Q11 434 aaKnown RBP4.56□□□□□ -1.68
USP44-201ENST00000258499 CLSTN3Q9BQT9 956 aa4.56□□□□□ -1.68
USP44-201ENST00000258499 CENPOQ9BU64 300 aa4.56□□□□□ -1.68
USP44-201ENST00000258499 SORBS1Q9BX66 1292 aaKnown RBP4.56□□□□□ -1.68
USP44-201ENST00000258499 KLF16Q9BXK1 252 aaPredicted RBP4.56□□□□□ -1.68
USP44-201ENST00000258499 ASPNQ9BXN1 380 aa4.56□□□□□ -1.68
USP44-201ENST00000258499 TEX12Q9BXU0 123 aa4.56□□□□□ -1.68
USP44-201ENST00000258499 RLIMQ9NVW2 624 aa4.56□□□□□ -1.68
USP44-201ENST00000258499 COMMD3Q9UBI1 195 aa4.56□□□□□ -1.68
USP44-201ENST00000258499 GULP1Q9UBP9 304 aa4.56□□□□□ -1.68
USP44-201ENST00000258499 ITGB1BP2Q9UKP3 347 aa4.56□□□□□ -1.68
USP44-201ENST00000258499 ITM2BQ9Y287 266 aa4.56□□□□□ -1.68
USP44-201ENST00000258499 HCN4Q9Y3Q4 1203 aa4.56□□□□□ -1.68
USP44-201ENST00000258499 DNMT3AQ9Y6K1 912 aaPredicted RBP4.56□□□□□ -1.68
USP44-201ENST00000258499 PMF1-BGLAPU3KQ54 211 aa4.56□□□□□ -1.68
USP44-201ENST00000258499 ANK1P16157 1881 aa4.56□□□□□ -1.68
USP44-201ENST00000258499 A6NL46 340 aa4.56□□□□□ -1.68
USP44-201ENST00000258499 PCDH17O14917 1159 aa4.56□□□□□ -1.68
USP44-201ENST00000258499 SCAMP2O15127 329 aaKnown RBP4.56□□□□□ -1.68
USP44-201ENST00000258499 JRKO75564 520 aa4.56□□□□□ -1.68
USP44-201ENST00000258499 UGT2B17O75795 530 aa4.56□□□□□ -1.68
USP44-201ENST00000258499 UPK1BO75841 260 aa4.56□□□□□ -1.68
USP44-201ENST00000258499 NR2F6P10588 404 aa4.56□□□□□ -1.68
USP44-201ENST00000258499 ITGAMP11215 1152 aa4.56□□□□□ -1.68
USP44-201ENST00000258499 TCEA1P23193 301 aaKnown RBP4.56□□□□□ -1.68
USP44-201ENST00000258499 CTGFP29279 349 aa4.56□□□□□ -1.68
USP44-201ENST00000258499 SOX3P41225 446 aa4.56□□□□□ -1.68
USP44-201ENST00000258499 NRIP1P48552 1158 aa4.56□□□□□ -1.68
USP44-201ENST00000258499 CTSCP53634 463 aa4.56□□□□□ -1.68
USP44-201ENST00000258499 HBA1P69905 142 aa4.56□□□□□ -1.68
USP44-201ENST00000258499 KHDRBS1Q07666 443 aaKnown RBP eCLIP4.56□□□□□ -1.68
USP44-201ENST00000258499 ZNF763Q0D2J5 394 aa4.56□□□□□ -1.68
USP44-201ENST00000258499 MRPL28Q13084 256 aaKnown RBP4.56□□□□□ -1.68
USP44-201ENST00000258499 IRF5Q13568 498 aa4.56□□□□□ -1.68
USP44-201ENST00000258499 KEAP1Q14145 624 aa4.56□□□□□ -1.68
USP44-201ENST00000258499 RPS26P11Q5JNZ5 115 aaPredicted RBP4.56□□□□□ -1.68
USP44-201ENST00000258499 LIPKQ5VXJ0 399 aa4.56□□□□□ -1.68
USP44-201ENST00000258499 STEAP3Q658P3 488 aa4.56□□□□□ -1.68
USP44-201ENST00000258499 CBLL1Q75N03 491 aa4.56□□□□□ -1.68
USP44-201ENST00000258499 OTOP2Q7RTS6 562 aa4.56□□□□□ -1.68
USP44-201ENST00000258499 MEX3DQ86XN8 651 aaKnown RBP4.56□□□□□ -1.68
USP44-201ENST00000258499 TMEM25Q86YD3 366 aa4.56□□□□□ -1.68
USP44-201ENST00000258499 RAB43Q86YS6 212 aa4.56□□□□□ -1.68
USP44-201ENST00000258499 BCL7CQ8WUZ0 217 aaPredicted RBP4.56□□□□□ -1.68
USP44-201ENST00000258499 GEMIN6Q8WXD5 167 aaKnown RBP4.56□□□□□ -1.68
USP44-201ENST00000258499 ASB11Q8WXH4 323 aa4.56□□□□□ -1.68
USP44-201ENST00000258499 USP7Q93009 1102 aa4.56□□□□□ -1.68
USP44-201ENST00000258499 PHF21AQ96BD5 680 aa4.56□□□□□ -1.68
USP44-201ENST00000258499 TADA1Q96BN2 335 aa4.56□□□□□ -1.68
USP44-201ENST00000258499 ARMC5Q96C12 935 aa4.56□□□□□ -1.68
USP44-201ENST00000258499 GFM1Q96RP9 751 aaKnown RBP4.56□□□□□ -1.68
USP44-201ENST00000258499 NIPSNAP1Q9BPW8 284 aa4.56□□□□□ -1.68
USP44-201ENST00000258499 SLC30A2Q9BRI3 323 aa4.56□□□□□ -1.68
USP44-201ENST00000258499 ZCCHC2Q9C0B9 1178 aaKnown RBP4.56□□□□□ -1.68
USP44-201ENST00000258499 HDHD2Q9H0R4 259 aa4.56□□□□□ -1.68
USP44-201ENST00000258499 ZDHHC4Q9NPG8 344 aa4.56□□□□□ -1.68
USP44-201ENST00000258499 CCDC177Q9NQR7 707 aaPredicted RBP4.56□□□□□ -1.68
USP44-201ENST00000258499 TMEM45AQ9NWC5 275 aa4.56□□□□□ -1.68
USP44-201ENST00000258499 ATP6V1HQ9UI12 483 aa4.56□□□□□ -1.68
USP44-201ENST00000258499 ZNF639Q9UID6 485 aa4.56□□□□□ -1.68
USP44-201ENST00000258499 TEKT2Q9UIF3 430 aa4.56□□□□□ -1.68
USP44-201ENST00000258499 B3GNT3Q9Y2A9 372 aa4.56□□□□□ -1.68
USP44-201ENST00000258499 SPIN1Q9Y657 262 aaPredicted RBP4.56□□□□□ -1.68
USP44-201ENST00000258499 MGAMO43451 1857 aa4.56□□□□□ -1.68
USP44-201ENST00000258499 TMEM202A6NGA9 273 aa4.56□□□□□ -1.68
USP44-201ENST00000258499 GLOD5A6NK44 160 aa4.56□□□□□ -1.68
USP44-201ENST00000258499 TLR4O00206 839 aa4.56□□□□□ -1.68
USP44-201ENST00000258499 GFRA2O00451 464 aa4.56□□□□□ -1.68
USP44-201ENST00000258499 CASKO14936 926 aa4.56□□□□□ -1.68
USP44-201ENST00000258499 TNFRSF21O75509 655 aa4.56□□□□□ -1.68
USP44-201ENST00000258499 CDRT1O95170 752 aa4.56□□□□□ -1.68
USP44-201ENST00000258499 CXCL14O95715 111 aa4.56□□□□□ -1.68
USP44-201ENST00000258499 CH25HO95992 272 aa4.56□□□□□ -1.68
USP44-201ENST00000258499 HMGA1P17096 107 aaKnown RBP4.56□□□□□ -1.68
USP44-201ENST00000258499 LHCGRP22888 699 aa4.56□□□□□ -1.68
USP44-201ENST00000258499 PDHA2P29803 388 aa4.56□□□□□ -1.68
USP44-201ENST00000258499 TIA1P31483 386 aaKnown RBP eCLIP4.56□□□□□ -1.68
USP44-201ENST00000258499 RCVRNP35243 200 aa4.56□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 7.4 ms